RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 SNF8Q96H20 258 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 CAPZA3Q96KX2 299 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 C5orf34Q96MH7 638 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 SLX1AQ9BQ83 275 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 STMN3Q9NZ72 180 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 CHMP2BQ9UQN3 213 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 TEX264Q9Y6I9 313 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 HEATR5BQ9P2D3 2071 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 HIVEP3Q5T1R4 2406 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 DYTNA2CJ06 578 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 CTAGE15A4D2H0 777 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 LRRTM2O43300 516 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 RDH16O75452 317 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 B3GALT4O96024 378 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 HIST1H2AGP0C0S8 130 aaPredicted RBP12.6□□□□□ -0.39
CPSF6-204ENST00000547486 ICAM2P13598 275 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 HIST1H2ADP20671 130 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 CCND1P24385 295 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 PDAP1Q13442 181 aaKnown RBP12.6□□□□□ -0.39
CPSF6-204ENST00000547486 MORF4L2Q15014 288 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 CATSPEREQ5SY80 951 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 MFSD4BQ5TF39 518 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 STEAP4Q687X5 459 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 DUPD1Q68J44 220 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 ZNF787Q6DD87 383 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 MAMDC2Q7Z304 686 aaPredicted RBP12.6□□□□□ -0.39
CPSF6-204ENST00000547486 ANKRD37Q7Z713 158 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 CTAGE6Q86UF2 777 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 ANKMY2Q8IV38 441 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 PDIK1LQ8N165 341 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 OR5T3Q8NGG3 340 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 METTL21AQ8WXB1 218 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 HIST1H2AHQ96KK5 128 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 HIST1H2AJQ99878 128 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 TRIM51Q9BSJ1 452 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 H2AFJQ9BTM1 129 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 TUBB6Q9BUF5 446 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 ANKHQ9HCJ1 492 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 ARL15Q9NXU5 204 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 NAALAD2Q9Y3Q0 740 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 PSAT1Q9Y617 370 aa12.6□□□□□ -0.39
CPSF6-204ENST00000547486 SPTBN1Q01082 2364 aaKnown RBP12.59□□□□□ -0.39
CPSF6-204ENST00000547486 CNTRLQ7Z7A1 2325 aa12.59□□□□□ -0.39
CPSF6-204ENST00000547486 TRAV17A0A0B4J275 112 aa12.59□□□□□ -0.39
CPSF6-204ENST00000547486 ZNF860A6NHJ4 632 aa12.59□□□□□ -0.39
CPSF6-204ENST00000547486 A8MUI8 341 aa12.59□□□□□ -0.39
CPSF6-204ENST00000547486 OR1F1O43749 312 aa12.59□□□□□ -0.39
CPSF6-204ENST00000547486 WISP2O76076 250 aa12.59□□□□□ -0.39
CPSF6-204ENST00000547486 GUCA1CO95843 209 aa12.59□□□□□ -0.39
CPSF6-204ENST00000547486 ST13P50502 369 aaKnown RBP12.59□□□□□ -0.39
CPSF6-204ENST00000547486 CCR8P51685 355 aa12.59□□□□□ -0.39
CPSF6-204ENST00000547486 TDGF1P3P51864 188 aa12.59□□□□□ -0.39
CPSF6-204ENST00000547486 ITGA8P53708 1063 aa12.59□□□□□ -0.39
CPSF6-204ENST00000547486 DR1Q01658 176 aa12.59□□□□□ -0.39
CPSF6-204ENST00000547486 FAM180AQ6UWF9 173 aa12.59□□□□□ -0.39
CPSF6-204ENST00000547486 SBSNQ6UWP8 590 aa12.59□□□□□ -0.39
CPSF6-204ENST00000547486 SYDE1Q6ZW31 735 aaPredicted RBP12.59□□□□□ -0.39
CPSF6-204ENST00000547486 AFAP1L2Q8N4X5 818 aa12.59□□□□□ -0.39
CPSF6-204ENST00000547486 BCORP1Q8N888 145 aa12.59□□□□□ -0.39
CPSF6-204ENST00000547486 GABPB2Q8TAK5 448 aaPredicted RBP12.59□□□□□ -0.39
CPSF6-204ENST00000547486 NEIL2Q969S2 332 aa12.59□□□□□ -0.39
CPSF6-204ENST00000547486 FBXL8Q96CD0 374 aa12.59□□□□□ -0.39
CPSF6-204ENST00000547486 PDLIM5Q96HC4 596 aaKnown RBP12.59□□□□□ -0.39
CPSF6-204ENST00000547486 MAGEB10Q96LZ2 347 aaPredicted RBP12.59□□□□□ -0.39
CPSF6-204ENST00000547486 HAUS8Q9BT25 410 aa12.59□□□□□ -0.39
CPSF6-204ENST00000547486 SARGQ9BW04 601 aa12.59□□□□□ -0.39
CPSF6-204ENST00000547486 RBCK1Q9BYM8 510 aa12.59□□□□□ -0.39
CPSF6-204ENST00000547486 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.59□□□□□ -0.39
CPSF6-204ENST00000547486 SPNS1Q9H2V7 528 aa12.59□□□□□ -0.39
CPSF6-204ENST00000547486 LANCL2Q9NS86 450 aa12.59□□□□□ -0.39
CPSF6-204ENST00000547486 OLAHQ9NV23 265 aa12.59□□□□□ -0.39
CPSF6-204ENST00000547486 SLC22A7Q9Y694 548 aa12.59□□□□□ -0.39
CPSF6-204ENST00000547486 POLEQ07864 2286 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 CDC7O00311 574 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 FANCGO15287 622 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 TTI1O43156 1089 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 MAN1A2O60476 641 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 CDC123O75794 336 aaPredicted RBP12.58□□□□□ -0.4
CPSF6-204ENST00000547486 MST1P26927 711 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 GRK3P35626 688 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 DCTP40126 519 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 AP1S2P56377 157 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 KCNK10P57789 538 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 GNG11P61952 73 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 RHAGQ02094 409 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 ZNF33BQ06732 778 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 FRG1Q14331 258 aaKnown RBP12.58□□□□□ -0.4
CPSF6-204ENST00000547486 FASTKD3Q14CZ7 662 aaKnown RBP12.58□□□□□ -0.4
CPSF6-204ENST00000547486 PPP1R3AQ16821 1122 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 BTBD16Q32M84 506 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 FCRLBQ6BAA4 426 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 PLAG1Q6DJT9 500 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 FAM45BPQ6NSW5 357 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 H3F3CQ6NXT2 135 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 PLPP5Q8NEB5 264 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 FAM45AQ8TCE6 357 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 LRRC39Q96DD0 335 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 PEX11GQ96HA9 241 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 TSNARE1Q96NA8 513 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 NPAS2Q99743 824 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms