RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 UBE2R2Q712K3 238 aaPredicted RBP8.01□□□□□ -1.13
USP28-215ENST00000545608 PRSS41Q7RTY9 318 aa8.01□□□□□ -1.13
USP28-215ENST00000545608 PIWIL4Q7Z3Z4 852 aaKnown RBP8.01□□□□□ -1.13
USP28-215ENST00000545608 VN1R4Q7Z5H5 301 aa8.01□□□□□ -1.13
USP28-215ENST00000545608 FJX1Q86VR8 437 aa8.01□□□□□ -1.13
USP28-215ENST00000545608 CPNE9Q8IYJ1 553 aa8.01□□□□□ -1.13
USP28-215ENST00000545608 RASGEF1CQ8N431 466 aa8.01□□□□□ -1.13
USP28-215ENST00000545608 OR9A4Q8NGU2 314 aa8.01□□□□□ -1.13
USP28-215ENST00000545608 CD200R1Q8TD46 325 aa8.01□□□□□ -1.13
USP28-215ENST00000545608 NR4A3Q92570 626 aa8.01□□□□□ -1.13
USP28-215ENST00000545608 KCNJ9Q92806 393 aa8.01□□□□□ -1.13
USP28-215ENST00000545608 MAGOHBQ96A72 148 aaKnown RBP8.01□□□□□ -1.13
USP28-215ENST00000545608 MS4A14Q96JA4 679 aa8.01□□□□□ -1.13
USP28-215ENST00000545608 SIGLEC10Q96LC7 697 aa8.01□□□□□ -1.13
USP28-215ENST00000545608 IMMP1LQ96LU5 166 aa8.01□□□□□ -1.13
USP28-215ENST00000545608 FRMD6Q96NE9 622 aa8.01□□□□□ -1.13
USP28-215ENST00000545608 SERPINB12Q96P63 405 aa8.01□□□□□ -1.13
USP28-215ENST00000545608 MACROD1Q9BQ69 325 aa8.01□□□□□ -1.13
USP28-215ENST00000545608 DRC3Q9H069 523 aa8.01□□□□□ -1.13
USP28-215ENST00000545608 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.01□□□□□ -1.13
USP28-215ENST00000545608 CCDC68Q9H2F9 335 aa8.01□□□□□ -1.13
USP28-215ENST00000545608 C20orf96Q9NUD7 363 aaPredicted RBP8.01□□□□□ -1.13
USP28-215ENST00000545608 TMEM184CQ9NVA4 438 aa8.01□□□□□ -1.13
USP28-215ENST00000545608 SAMD15Q9P1V8 674 aa8.01□□□□□ -1.13
USP28-215ENST00000545608 FBXO5Q9UKT4 447 aa8.01□□□□□ -1.13
USP28-215ENST00000545608 SH2B3Q9UQQ2 575 aa8.01□□□□□ -1.13
USP28-215ENST00000545608 CROCCQ5TZA2 2017 aa8.01□□□□□ -1.13
USP28-215ENST00000545608 UTP20O75691 2785 aaKnown RBP8.01□□□□□ -1.13
USP28-215ENST00000545608 NUP210LQ5VU65 1888 aa8□□□□□ -1.13
USP28-215ENST00000545608 KCNE1BA0A087WTH5 132 aa8□□□□□ -1.13
USP28-215ENST00000545608 A0A1B0GUH1 482 aa8□□□□□ -1.13
USP28-215ENST00000545608 OR2W5A6NFC9 320 aa8□□□□□ -1.13
USP28-215ENST00000545608 LCMT2O60294 686 aaKnown RBP8□□□□□ -1.13
USP28-215ENST00000545608 SEC24DO94855 1032 aaPredicted RBP8□□□□□ -1.13
USP28-215ENST00000545608 UQCRHP07919 91 aa8□□□□□ -1.13
USP28-215ENST00000545608 C8orf89P0DMQ9 161 aa8□□□□□ -1.13
USP28-215ENST00000545608 ENO3P13929 434 aaPredicted RBP8□□□□□ -1.13
USP28-215ENST00000545608 MST1P26927 711 aa8□□□□□ -1.13
USP28-215ENST00000545608 COILP38432 576 aaPredicted RBP8□□□□□ -1.13
USP28-215ENST00000545608 MAGEA3P43357 314 aa8□□□□□ -1.13
USP28-215ENST00000545608 AVPR1BP47901 424 aa8□□□□□ -1.13
USP28-215ENST00000545608 IDH3AP50213 366 aa8□□□□□ -1.13
USP28-215ENST00000545608 PER3P56645 1201 aa8□□□□□ -1.13
USP28-215ENST00000545608 CSNK1G2P78368 415 aa8□□□□□ -1.13
USP28-215ENST00000545608 CCZ1BP86790 482 aa8□□□□□ -1.13
USP28-215ENST00000545608 CCZ1P86791 482 aaPredicted RBP8□□□□□ -1.13
USP28-215ENST00000545608 TIAL1Q01085 375 aaKnown RBP eCLIP8□□□□□ -1.13
USP28-215ENST00000545608 LONRF1Q17RB8 773 aa8□□□□□ -1.13
USP28-215ENST00000545608 HSP90AA5PQ58FG0 334 aa8□□□□□ -1.13
USP28-215ENST00000545608 ARSJQ5FYB0 599 aaPredicted RBP8□□□□□ -1.13
USP28-215ENST00000545608 SP5Q6BEB4 398 aaPredicted RBP8□□□□□ -1.13
USP28-215ENST00000545608 HIBCHQ6NVY1 386 aaPredicted RBP8□□□□□ -1.13
USP28-215ENST00000545608 LANCL3Q6ZV70 420 aa8□□□□□ -1.13
USP28-215ENST00000545608 TICAM1Q8IUC6 712 aa8□□□□□ -1.13
USP28-215ENST00000545608 LRRC8AQ8IWT6 810 aa8□□□□□ -1.13
USP28-215ENST00000545608 NAT8LQ8N9F0 302 aa8□□□□□ -1.13
USP28-215ENST00000545608 OR51Q1Q8NH59 317 aa8□□□□□ -1.13
USP28-215ENST00000545608 RELTQ969Z4 430 aa8□□□□□ -1.13
USP28-215ENST00000545608 CCDC138Q96M89 665 aa8□□□□□ -1.13
USP28-215ENST00000545608 CYTH2Q99418 400 aa8□□□□□ -1.13
USP28-215ENST00000545608 EBNA1BP2Q99848 306 aaKnown RBP8□□□□□ -1.13
USP28-215ENST00000545608 AARSD1Q9BTE6 412 aaKnown RBP8□□□□□ -1.13
USP28-215ENST00000545608 TUBB6Q9BUF5 446 aa8□□□□□ -1.13
USP28-215ENST00000545608 VN1R1Q9GZP7 353 aa8□□□□□ -1.13
USP28-215ENST00000545608 XAB2Q9HCS7 855 aaKnown RBP8□□□□□ -1.13
USP28-215ENST00000545608 IARS2Q9NSE4 1012 aaKnown RBP8□□□□□ -1.13
USP28-215ENST00000545608 STMN3Q9NZ72 180 aa8□□□□□ -1.13
USP28-215ENST00000545608 HCN3Q9P1Z3 774 aa8□□□□□ -1.13
USP28-215ENST00000545608 VTI1BQ9UEU0 232 aa8□□□□□ -1.13
USP28-215ENST00000545608 ADAMTS6Q9UKP5 1117 aa8□□□□□ -1.13
USP28-215ENST00000545608 PDE10AQ9Y233 779 aa8□□□□□ -1.13
USP28-215ENST00000545608 MAD1L1Q9Y6D9 718 aa8□□□□□ -1.13
USP28-215ENST00000545608 SVILO95425 2214 aa8□□□□□ -1.13
USP28-215ENST00000545608 DIDO1Q9BTC0 2240 aaKnown RBP8□□□□□ -1.13
USP28-215ENST00000545608 TEX15Q9BXT5 2789 aa7.99□□□□□ -1.13
USP28-215ENST00000545608 ZGRF1Q86YA3 2104 aa7.99□□□□□ -1.13
USP28-215ENST00000545608 FEZF1A0PJY2 475 aa7.99□□□□□ -1.13
USP28-215ENST00000545608 ARHGAP10A1A4S6 786 aa7.99□□□□□ -1.13
USP28-215ENST00000545608 OR5H15A6NDH6 313 aa7.99□□□□□ -1.13
USP28-215ENST00000545608 A8MUI8 341 aa7.99□□□□□ -1.13
USP28-215ENST00000545608 H0YIG0 161 aa7.99□□□□□ -1.13
USP28-215ENST00000545608 SGK494L7N484 410 aa7.99□□□□□ -1.13
USP28-215ENST00000545608 ZNF500O60304 480 aaPredicted RBP7.99□□□□□ -1.13
USP28-215ENST00000545608 RASAL1O95294 804 aa7.99□□□□□ -1.13
USP28-215ENST00000545608 NSA2O95478 260 aaKnown RBP7.99□□□□□ -1.13
USP28-215ENST00000545608 ICAM2P13598 275 aa7.99□□□□□ -1.13
USP28-215ENST00000545608 PRF1P14222 555 aa7.99□□□□□ -1.13
USP28-215ENST00000545608 IL1RNP18510 177 aa7.99□□□□□ -1.13
USP28-215ENST00000545608 HRH2P25021 359 aa7.99□□□□□ -1.13
USP28-215ENST00000545608 GABRB3P28472 473 aa7.99□□□□□ -1.13
USP28-215ENST00000545608 BCL6P41182 706 aa7.99□□□□□ -1.13
USP28-215ENST00000545608 ST13P50502 369 aaKnown RBP7.99□□□□□ -1.13
USP28-215ENST00000545608 RPS15AP62244 130 aaKnown RBP7.99□□□□□ -1.13
USP28-215ENST00000545608 TBPL1P62380 186 aa7.99□□□□□ -1.13
USP28-215ENST00000545608 ZNF33BQ06732 778 aa7.99□□□□□ -1.13
USP28-215ENST00000545608 NAE1Q13564 534 aa7.99□□□□□ -1.13
USP28-215ENST00000545608 INAQ16352 499 aa7.99□□□□□ -1.13
USP28-215ENST00000545608 CYP1B1Q16678 543 aa7.99□□□□□ -1.13
USP28-215ENST00000545608 ZXDCQ2QGD7 858 aaPredicted RBP7.99□□□□□ -1.13
USP28-215ENST00000545608 MINDY4Q4G0A6 757 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms