RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 FFAR3O14843 346 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 PPM1DO15297 605 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 GPR42O15529 346 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 UGDHO60701 494 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 KATNA1O75449 491 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 EEDO75530 441 aaKnown RBP6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 SLC22A3O75751 556 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 ATP6AP2O75787 350 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 EPN2O95208 641 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 RPN2P04844 631 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 CHRM5P08912 532 aaPredicted RBP6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 ALDOCP09972 364 aaKnown RBP6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 CDH1P12830 882 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 HOXB3P14651 431 aaPredicted RBP6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 JUPP14923 745 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 PEX2P28328 305 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 HALP42357 657 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 DPP6P42658 865 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 LSSP48449 732 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 CHN2P52757 468 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 EEFSECP57772 596 aaKnown RBP6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 HNRNPKP61978 463 aaKnown RBP eCLIP6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 PPP1CAP62136 330 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 EMX2Q04743 252 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 CHIT1Q13231 466 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 SIM2Q14190 667 aaPredicted RBP6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 RCAN2Q14206 197 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 ABRAXAS2Q15018 415 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 ELOCQ15369 112 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 LPAL2Q16609 132 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 DEFB133Q30KQ1 61 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 SFT2D3Q587I9 215 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 PLA2G2CQ5R387 149 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 PRAMEF13Q5VWM6 474 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 LPCAT4Q643R3 524 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 CAPN13Q6MZZ7 669 aaPredicted RBP6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 SLC23A3Q6PIS1 610 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 SCIMPQ6UWF3 145 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 LCTLQ6UWM7 567 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 TMEM26Q6ZUK4 368 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 FKBP9P1Q75LS8 142 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 ZNF438Q7Z4V0 828 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 ZNF761Q86XN6 746 aaPredicted RBP6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 PROSER1Q86XN7 944 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 TICAM1Q8IUC6 712 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 SLC35F3Q8IY50 421 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 RNF175Q8N4F7 328 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 ARL14Q8N4G2 192 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 SNX31Q8N9S9 440 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 GLB1L3Q8NCI6 653 aaPredicted RBP6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 FAM46DQ8NEK8 389 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 OR4K1Q8NGD4 311 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 SAP25Q8TEE9 199 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 ZFPM2Q8WW38 1151 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 LRRC58Q96CX6 371 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 C11orf24Q96F05 449 aaPredicted RBP6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 MED8Q96G25 268 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 MARK4Q96L34 752 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 PPM1MQ96MI6 270 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 OR2A14Q96R47 310 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 OSBPL11Q9BXB4 747 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 SLC29A3Q9BZD2 475 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 AICDAQ9GZX7 198 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 SMOC1Q9H4F8 434 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 EHD1Q9H4M9 534 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 CCDC177Q9NQR7 707 aaPredicted RBP6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 GPRC5BQ9NZH0 403 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 OR6C2Q9NZP2 312 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 ACTR3BQ9P1U1 418 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 SPASTQ9UBP0 616 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 TAC3Q9UHF0 121 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 HEBP2Q9Y5Z4 205 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 PRORSD1PA6NEY8 169 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 CCDC154A6NI56 674 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 NPIPB8E9PQR5 432 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 H0YIV9 168 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 NR5A2O00482 541 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 SORBS2O94875 1100 aaKnown RBP6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 TNFAIP8O95379 198 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 CLDN9O95484 217 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 ETHE1O95571 254 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 GPIP06744 558 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 LINC00032P0C843 101 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 CTSEP14091 401 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 NDUFS1P28331 727 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 HSD17B2P37059 387 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 AQP4P55087 323 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 C21orf59P57076 290 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 SNRPNP63162 240 aaKnown RBP6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 ZNF33BQ06732 778 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 TCF15Q12870 199 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 PDK3Q15120 406 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 TEAD4Q15561 434 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 CPSF6Q16630 551 aaKnown RBP eCLIP6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 HLA-BQ31612 363 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 ATG9BQ674R7 924 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 TCEAL6Q6IPX3 200 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 GRHL2Q6ISB3 625 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 ZNF425Q6IV72 752 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 LCN8Q6JVE9 175 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms