RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 OR2A5Q96R48 311 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 MACROD1Q9BQ69 325 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 B3GNT4Q9C0J1 378 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 PITHD1Q9GZP4 211 aaPredicted RBP6.03□□□□□ -1.44
LTBR-212ENST00000543542 SPNS1Q9H2V7 528 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 EHD1Q9H4M9 534 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 COPS7BQ9H9Q2 264 aaPredicted RBP6.03□□□□□ -1.44
LTBR-212ENST00000543542 ANKHQ9HCJ1 492 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 MLXIPLQ9NP71 852 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 SSU72Q9NP77 194 aaKnown RBP6.03□□□□□ -1.44
LTBR-212ENST00000543542 CUTCQ9NTM9 273 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 OXSMQ9NWU1 459 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 GEMIN8Q9NWZ8 242 aaKnown RBP6.03□□□□□ -1.44
LTBR-212ENST00000543542 COPG2Q9UBF2 871 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 DHCR7Q9UBM7 475 aaKnown RBP6.03□□□□□ -1.44
LTBR-212ENST00000543542 ZFP69BQ9UJL9 534 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 PILRAQ9UKJ1 303 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 PADI1Q9ULC6 663 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 RUVBL1Q9Y265 456 aaKnown RBP6.03□□□□□ -1.44
LTBR-212ENST00000543542 PCDHB3Q9Y5E6 796 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 PCDHGA4Q9Y5G9 962 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 PCDHGA11Q9Y5H2 935 aa6.03□□□□□ -1.44
LTBR-212ENST00000543542 MDC1Q14676 2089 aaKnown RBP6.02□□□□□ -1.45
LTBR-212ENST00000543542 SPTBN4Q9H254 2564 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 KCNE1BA0A087WTH5 132 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 A0A1B0GX78 115 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 TMEM120BA0PK00 339 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 TMEM8BA6NDV4 472 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 HMGB1P1B2RPK0 211 aaPredicted RBP6.02□□□□□ -1.45
LTBR-212ENST00000543542 AGPSO00116 658 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 MEN1O00255 615 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 OR7A17O14581 309 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 FFAR3O14843 346 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 DSCR3O14972 297 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 GPR42O15529 346 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 P2RX6O15547 441 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 TLX3O43711 291 aaPredicted RBP6.02□□□□□ -1.45
LTBR-212ENST00000543542 TYROBPO43914 113 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 UGDHO60701 494 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 SH3BGRLO75368 114 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 OR4F21O95013 312 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 BPGMP07738 259 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 TCN2P20062 427 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 FBLP22087 321 aaKnown RBP6.02□□□□□ -1.45
LTBR-212ENST00000543542 GSTM2P28161 218 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 DLSTP36957 453 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 RAP1GDS1P52306 607 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 PKNOX1P55347 436 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 DNAJB13P59910 316 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 STXBP1P61764 594 aaKnown RBP6.02□□□□□ -1.45
LTBR-212ENST00000543542 RPS15P62841 145 aaKnown RBP6.02□□□□□ -1.45
LTBR-212ENST00000543542 DCDP81605 110 aaKnown RBP6.02□□□□□ -1.45
LTBR-212ENST00000543542 RELAQ04206 551 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 TGM3Q08188 693 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 ABHD18Q0P651 414 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 LCP2Q13094 533 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 PCLAFQ15004 111 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 TGIF1Q15583 401 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 ZRSR2Q15696 482 aaKnown RBP6.02□□□□□ -1.45
LTBR-212ENST00000543542 TBCCQ15814 346 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 SGO1Q5FBB7 561 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 MFSD4BQ5TF39 518 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 ARHGAP40Q5TG30 622 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 GARNL3Q5VVW2 1013 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 RHBDD2Q6NTF9 364 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 FAM199XQ6PEV8 388 aaPredicted RBP6.02□□□□□ -1.45
LTBR-212ENST00000543542 GPRIN3Q6ZVF9 776 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 CHSY3Q70JA7 882 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 ABHD13Q7L211 337 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.02□□□□□ -1.45
LTBR-212ENST00000543542 DSELQ8IZU8 1212 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 TMEM151AQ8N4L1 468 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 CDYL2Q8N8U2 506 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 ANKRD53Q8N9V6 530 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 OR4F6Q8NGB9 312 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 OR52B6Q8NGF0 335 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 METTL6Q8TCB7 284 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 PROKR1Q8TCW9 393 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 DYDC1Q8WWB3 177 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 ARL8AQ96BM9 186 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 MOCOSQ96EN8 888 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 MMABQ96EY8 250 aaPredicted RBP6.02□□□□□ -1.45
LTBR-212ENST00000543542 ATP6V1G3Q96LB4 118 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 C17orf62Q9BQA9 187 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 CENPKQ9BS16 269 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 MECRQ9BV79 373 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 NTMT1Q9BV86 223 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 C1QTNF3Q9BXJ4 246 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 DPH1Q9BZG8 443 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 SHCBP1LQ9BZQ2 653 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 ELOVL6Q9H5J4 265 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 NT5DC2Q9H857 520 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 GPN2Q9H9Y4 310 aaPredicted RBP6.02□□□□□ -1.45
LTBR-212ENST00000543542 EML4Q9HC35 981 aaKnown RBP6.02□□□□□ -1.45
LTBR-212ENST00000543542 ZNF304Q9HCX3 659 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 MID1IP1Q9NPA3 183 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 LHX9Q9NQ69 397 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 IFT80Q9P2H3 777 aaPredicted RBP6.02□□□□□ -1.45
LTBR-212ENST00000543542 ADGRE2Q9UHX3 823 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 CDC14AQ9UNH5 594 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms