RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 CAMK1GQ96NX5 476 aa18.77■□□□□ 0.6
SUDS3-204ENST00000543473 CPQQ9Y646 472 aa18.77■□□□□ 0.6
SUDS3-204ENST00000543473 GSTM3P21266 225 aa18.77■□□□□ 0.6
SUDS3-204ENST00000543473 NR4A2P43354 598 aa18.77■□□□□ 0.6
SUDS3-204ENST00000543473 TAF13Q15543 124 aa18.77■□□□□ 0.6
SUDS3-204ENST00000543473 CHRNA6Q15825 494 aa18.77■□□□□ 0.6
SUDS3-204ENST00000543473 SPIN4Q56A73 249 aa18.77■□□□□ 0.6
SUDS3-204ENST00000543473 ARL9Q6T311 187 aa18.77■□□□□ 0.6
SUDS3-204ENST00000543473 PHYKPLQ8IUZ5 450 aa18.77■□□□□ 0.6
SUDS3-204ENST00000543473 ZMIZ2Q8NF64 920 aa18.77■□□□□ 0.6
SUDS3-204ENST00000543473 FRS2Q8WU20 508 aa18.77■□□□□ 0.6
SUDS3-204ENST00000543473 ZNF486Q96H40 463 aaPredicted RBP18.77■□□□□ 0.6
SUDS3-204ENST00000543473 ZDHHC3Q9NYG2 299 aa18.77■□□□□ 0.6
SUDS3-204ENST00000543473 ZNF510Q9Y2H8 683 aa18.77■□□□□ 0.6
SUDS3-204ENST00000543473 IFNA16P05015 189 aa18.77■□□□□ 0.59
SUDS3-204ENST00000543473 SRPRAP08240 638 aaKnown RBP18.77■□□□□ 0.59
SUDS3-204ENST00000543473 MAP2K3P46734 347 aa18.77■□□□□ 0.59
SUDS3-204ENST00000543473 SLC36A3Q495N2 470 aa18.77■□□□□ 0.59
SUDS3-204ENST00000543473 TMEM220Q6QAJ8 160 aa18.77■□□□□ 0.59
SUDS3-204ENST00000543473 IMP4Q96G21 291 aaKnown RBP18.77■□□□□ 0.59
SUDS3-204ENST00000543473 CRTAC1Q9NQ79 661 aa18.77■□□□□ 0.59
SUDS3-204ENST00000543473 TNFRSF10DQ9UBN6 386 aa18.77■□□□□ 0.59
SUDS3-204ENST00000543473 WNT9AO14904 365 aa18.76■□□□□ 0.59
SUDS3-204ENST00000543473 POP4O95707 220 aaKnown RBP18.76■□□□□ 0.59
SUDS3-204ENST00000543473 BCHEP06276 602 aa18.76■□□□□ 0.59
SUDS3-204ENST00000543473 CKMT1AP12532 417 aa18.76■□□□□ 0.59
SUDS3-204ENST00000543473 ZNF81P51508 661 aa18.76■□□□□ 0.59
SUDS3-204ENST00000543473 UGT8Q16880 541 aa18.76■□□□□ 0.59
SUDS3-204ENST00000543473 ANKRD26P1Q6NSI1 321 aa18.76■□□□□ 0.59
SUDS3-204ENST00000543473 ZFP90Q8TF47 636 aa18.76■□□□□ 0.59
SUDS3-204ENST00000543473 GTPBP2Q9BX10 602 aaKnown RBP18.76■□□□□ 0.59
SUDS3-204ENST00000543473 C1QTNF7Q9BXJ2 289 aa18.76■□□□□ 0.59
SUDS3-204ENST00000543473 NLE1Q9NVX2 485 aaPredicted RBP18.76■□□□□ 0.59
SUDS3-204ENST00000543473 RHCGQ9UBD6 479 aa18.76■□□□□ 0.59
SUDS3-204ENST00000543473 ENPP5Q9UJA9 477 aa18.76■□□□□ 0.59
SUDS3-204ENST00000543473 AP2S1P53680 142 aaPredicted RBP18.76■□□□□ 0.59
SUDS3-204ENST00000543473 ARF5P84085 180 aa18.76■□□□□ 0.59
SUDS3-204ENST00000543473 GRM2Q14416 872 aa18.76■□□□□ 0.59
SUDS3-204ENST00000543473 ZNF630Q2M218 657 aaPredicted RBP18.76■□□□□ 0.59
SUDS3-204ENST00000543473 PNCKQ6P2M8 343 aa18.76■□□□□ 0.59
SUDS3-204ENST00000543473 FAM171BQ6P995 826 aa18.76■□□□□ 0.59
SUDS3-204ENST00000543473 PRSS48Q7RTY5 328 aa18.76■□□□□ 0.59
SUDS3-204ENST00000543473 TSPYL5Q86VY4 417 aaPredicted RBP18.76■□□□□ 0.59
SUDS3-204ENST00000543473 SRFBP1Q8NEF9 429 aaKnown RBP18.76■□□□□ 0.59
SUDS3-204ENST00000543473 SLC2A13Q96QE2 648 aa18.76■□□□□ 0.59
SUDS3-204ENST00000543473 SLC30A3Q99726 388 aa18.76■□□□□ 0.59
SUDS3-204ENST00000543473 MYOCQ99972 504 aa18.76■□□□□ 0.59
SUDS3-204ENST00000543473 CCL16O15467 120 aa18.76■□□□□ 0.59
SUDS3-204ENST00000543473 MITFO75030 526 aaPredicted RBP18.76■□□□□ 0.59
SUDS3-204ENST00000543473 TCEA1P23193 301 aaKnown RBP18.76■□□□□ 0.59
SUDS3-204ENST00000543473 MAGEA2P43356 314 aa18.76■□□□□ 0.59
SUDS3-204ENST00000543473 PTGES3Q15185 160 aaKnown RBP18.76■□□□□ 0.59
SUDS3-204ENST00000543473 LRRC66Q68CR7 880 aa18.76■□□□□ 0.59
SUDS3-204ENST00000543473 ADGRD2Q7Z7M1 963 aa18.76■□□□□ 0.59
SUDS3-204ENST00000543473 ZNF598Q86UK7 904 aaKnown RBP18.76■□□□□ 0.59
SUDS3-204ENST00000543473 PTPN18Q99952 460 aa18.76■□□□□ 0.59
SUDS3-204ENST00000543473 IFT27Q9BW83 186 aa18.76■□□□□ 0.59
SUDS3-204ENST00000543473 GPSM3Q9Y4H4 160 aa18.76■□□□□ 0.59
SUDS3-204ENST00000543473 C12orf71A8MTZ7 269 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 NEDD8-MDP1E9PL57 170 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 OR1F1O43749 312 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 SLBPQ14493 270 aaKnown RBP eCLIP18.75■□□□□ 0.59
SUDS3-204ENST00000543473 CARM1Q86X55 608 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 LILRA2Q8N149 483 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 NDNFQ8TB73 568 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 L3HYPDHQ96EM0 354 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 EFCAB11Q9BUY7 163 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 ENAMQ9NRM1 1142 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 BTAF1O14981 1849 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 C1QTNF3-AMACRE9PGA6 284 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 PI15O43692 258 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 C1orf216Q8TAB5 229 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 CLIP3Q96DZ5 547 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 FAM129BQ96TA1 746 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 B3GNT3Q9Y2A9 372 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 L7N2F9 121 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 PIRO00625 290 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 EDIL3O43854 480 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 PPIGQ13427 754 aaKnown RBP eCLIP18.75■□□□□ 0.59
SUDS3-204ENST00000543473 SF1Q15637 639 aaKnown RBP18.75■□□□□ 0.59
SUDS3-204ENST00000543473 LIPKQ5VXJ0 399 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 C14orf80Q86SX3 495 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 RANBP3LQ86VV4 465 aaPredicted RBP18.75■□□□□ 0.59
SUDS3-204ENST00000543473 DTWD1Q8N5C7 304 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 NPWQ8N729 165 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 TMEM125Q96AQ2 219 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 PLD4Q96BZ4 506 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 SLC28A3Q9HAS3 691 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 MARK1Q9P0L2 795 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 MKL2Q9ULH7 1088 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 WWP2O00308 870 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 PLD2O14939 933 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 NUAK1O60285 661 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 SERPINA3P01011 423 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 BCKDHAP12694 445 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 HTR2BP41595 481 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 RPA4Q13156 261 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 SWI5Q1ZZU3 235 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 MS4A13Q5J8X5 152 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 PAGE3Q5JUK9 113 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms