RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 CNTRLQ7Z7A1 2325 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 OR6C74A6NCV1 312 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 FAM159BA6NKW6 160 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 LOC730098B7Z3J9 87 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 SDC3O75056 442 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 ARSAP15289 507 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 ZNF823P16415 610 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 KCNC3Q14003 757 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 ZNF311Q5JNZ3 666 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 MZT2AQ6P582 158 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 CLNKQ7Z7G1 428 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 TUSC5Q8IXB3 177 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 PGAM4Q8N0Y7 254 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 OXR1Q8N573 874 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 ZNF321PQ8N8H1 164 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 RHBDD1Q8TEB9 315 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 TSACCQ96A04 125 aaPredicted RBP6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 ZUFSPQ96AP4 578 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 ZFRQ96KR1 1074 aaKnown RBP6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 CLSTN3Q9BQT9 956 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 OR51B5Q9H339 312 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 PTGES2Q9H7Z7 377 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 RNPEPL1Q9HAU8 725 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 PLEKHA1Q9HB21 404 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 CCNB1IP1Q9NPC3 277 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 CKLFQ9UBR5 152 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 RARRES3Q9UL19 164 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 CLEC4AQ9UMR7 237 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 MRPS7Q9Y2R9 242 aaKnown RBP6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 PLCH1Q4KWH8 1693 aa6.69□□□□□ -1.34
SRGAP1-206ENST00000543397 C2orf71A6NGG8 1288 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 CAPN8A6NHC0 703 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 ZNF726A6NNF4 738 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 NDUFS8O00217 210 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 GNB5O14775 395 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 JUNP05412 331 aaKnown RBP6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 FHP07954 510 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 DCAF12L1Q5VU92 463 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 BROXQ5VW32 411 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 LYSMD4Q5XG99 296 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 KLHDC10Q6PID8 442 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 TDHQ8IZJ6 230 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 ZCCHC7Q8N3Z6 543 aaKnown RBP6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 OR4C6Q8NH72 309 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 KIAA1191Q96A73 305 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 ROPN1LQ96C74 230 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 FIZ1Q96SL8 496 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 OXSMQ9NWU1 459 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 CMTM6Q9NX76 183 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 P2RX2Q9UBL9 471 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 KNL1Q8NG31 2342 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 LAMB4A4D0S4 1761 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 hCG_1807616A0A1W2PRN6 198 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 FAM234BA2RU67 622 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 FOXO6A8MYZ6 492 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 BRINP1O60477 761 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 OR2B3O76000 313 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 CHRNGP07510 517 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 CD72P21854 359 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 CDH12P55289 794 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 TGFBIQ15582 683 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 DGUOKQ16854 277 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 REP15Q6BDI9 236 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 TMPRSS11AQ6ZMR5 421 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 SLC30A8Q8IWU4 369 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 OR2T34Q8NGX1 318 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 SLC25A36Q96CQ1 311 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 HAPLN2Q9GZV7 340 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 TRNAU1APQ9NX07 287 aaKnown RBP6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 MS4A12Q9NXJ0 267 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 UBR2Q8IWV8 1755 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 CLEC3AO75596 197 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 LDOC1O95751 146 aaPredicted RBP6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 MBP02144 154 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 SRCP12931 536 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 S100A1P23297 94 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 PACS2Q86VP3 889 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 ZDHHC14Q8IZN3 488 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 METTL27Q8N6F8 245 aaPredicted RBP6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 OR4F6Q8NGB9 312 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 OR5M3Q8NGP4 307 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 MIEF2Q96C03 454 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 PTCHD1Q96NR3 888 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 CAMK1GQ96NX5 476 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 COL21A1Q96P44 957 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 PLEKHG4BQ96PX9 1271 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 C17orf62Q9BQA9 187 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 C12orf49Q9H741 205 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 A0A1W2PPL8 197 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 CASC3O15234 703 aaKnown RBP6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 MAFKO60675 156 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 ENTPD5O75356 428 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 SEMA3DO95025 777 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 EBLN1P0CF75 366 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 CCR10P46092 362 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 YAP1P46937 504 aaKnown RBP6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 CDK9P50750 372 aaKnown RBP6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 CACNA2D1P54289 1103 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 CASP6P55212 293 aa6.68□□□□□ -1.34
SRGAP1-206ENST00000543397 HHEXQ03014 270 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms