RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 TAGAPQ8N103 731 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 FAM46DQ8NEK8 389 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 CCL4L1Q8NHW4 92 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 RAX2Q96IS3 184 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 FMO2Q99518 471 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 PRPF18Q99633 342 aaKnown RBP4.96□□□□□ -1.62
CLIP1-217ENST00000543205 VRK1Q99986 396 aaPredicted RBP4.96□□□□□ -1.62
CLIP1-217ENST00000543205 TSSK1BQ9BXA7 367 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 CLPBQ9H078 707 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 DPEP2Q9H4A9 486 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 OSGEPL1Q9H4B0 414 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 VPS37BQ9H9H4 285 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 ACSS2Q9NR19 701 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 IARS2Q9NSE4 1012 aaKnown RBP4.96□□□□□ -1.62
CLIP1-217ENST00000543205 KLC4Q9NSK0 619 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 ZDHHC18Q9NUE0 388 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 DLL3Q9NYJ7 618 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 IL1RAPL1Q9NZN1 696 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 TAAR2Q9P1P5 351 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 MARCH4Q9P2E8 410 aaPredicted RBP4.96□□□□□ -1.62
CLIP1-217ENST00000543205 KCNK6Q9Y257 313 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 DNAJC16Q9Y2G8 782 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 PLEKHM1Q9Y4G2 1056 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 RALGAPA1Q6GYQ0 2036 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 PI4KAP42356 2102 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 IGLV3-16A0A075B6K0 115 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 UBA6A0AVT1 1052 aaPredicted RBP4.96□□□□□ -1.62
CLIP1-217ENST00000543205 SLC30A4O14863 429 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 OR1I1O60431 355 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 ZNF205O95201 554 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 LDOC1O95751 146 aaPredicted RBP4.96□□□□□ -1.62
CLIP1-217ENST00000543205 ANXA2P07355 339 aaKnown RBP4.96□□□□□ -1.62
CLIP1-217ENST00000543205 GSTA2P09210 222 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 QDPRP09417 244 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 GSTM1P09488 218 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 SFTPCP11686 197 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 OGNP20774 298 aaKnown RBP4.96□□□□□ -1.62
CLIP1-217ENST00000543205 AK4P27144 223 aaPredicted RBP4.96□□□□□ -1.62
CLIP1-217ENST00000543205 RPL10P27635 214 aaKnown RBP4.96□□□□□ -1.62
CLIP1-217ENST00000543205 FMO4P31512 558 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 CARSP49589 748 aaKnown RBP4.96□□□□□ -1.62
CLIP1-217ENST00000543205 CTSCP53634 463 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 EIF3BP55884 814 aaKnown RBP4.96□□□□□ -1.62
CLIP1-217ENST00000543205 TEKQ02763 1124 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 FASTKD3Q14CZ7 662 aaKnown RBP4.96□□□□□ -1.62
CLIP1-217ENST00000543205 NR0B2Q15466 257 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 ADRM1Q16186 407 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 BCL7AQ4VC05 210 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 HSP90AA5PQ58FG0 334 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 CATSPEREQ5SY80 951 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 STEAP4Q687X5 459 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 PTRHD1Q6GMV3 140 aaKnown RBP4.96□□□□□ -1.62
CLIP1-217ENST00000543205 TRAT1Q6PIZ9 186 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 C3orf62Q6ZUJ4 267 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 KANSL1Q7Z3B3 1105 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 AMZ2Q86W34 360 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 LRRC6Q86X45 466 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 NRROSQ86YC3 692 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 CILP2Q8IUL8 1156 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 ZNF547Q8IVP9 402 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 CLDN19Q8N6F1 224 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 PNPLA1Q8N8W4 532 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 OR4C6Q8NH72 309 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 NAT14Q8WUY8 206 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 NCSTNQ92542 709 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 DLG3Q92796 817 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 MTFMTQ96DP5 389 aaKnown RBP4.96□□□□□ -1.62
CLIP1-217ENST00000543205 CERS2Q96G23 380 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 C9orf72Q96LT7 481 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 WDR83Q9BRX9 315 aaKnown RBP4.96□□□□□ -1.62
CLIP1-217ENST00000543205 TIMM29Q9BSF4 260 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 CCM2Q9BSQ5 444 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 RTKNQ9BST9 563 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 CDADC1Q9BWV3 514 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 KRTAP17-1Q9BYP8 105 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 OPA3Q9H6K4 179 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 NECTIN3Q9NQS3 549 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 PRDM7Q9NQW5 492 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 PAPOLBQ9NRJ5 636 aaKnown RBP4.96□□□□□ -1.62
CLIP1-217ENST00000543205 ADPRHL2Q9NX46 363 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 NCKIPSDQ9NZQ3 722 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 SLAMF8Q9P0V8 285 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 ZNF624Q9P2J8 865 aaPredicted RBP4.96□□□□□ -1.62
CLIP1-217ENST00000543205 GULP1Q9UBP9 304 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 FTSJ1Q9UET6 329 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 GNPTGQ9UJJ9 305 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 NFU1Q9UMS0 254 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 BTBD3Q9Y2F9 522 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 PCYT1BQ9Y5K3 369 aaPredicted RBP4.96□□□□□ -1.62
CLIP1-217ENST00000543205 CFAP20Q9Y6A4 193 aaKnown RBP4.96□□□□□ -1.62
CLIP1-217ENST00000543205 PRSS21Q9Y6M0 314 aa4.96□□□□□ -1.62
CLIP1-217ENST00000543205 FLNBO75369 2602 aaKnown RBP4.95□□□□□ -1.62
CLIP1-217ENST00000543205 ADAMTS9Q9P2N4 1935 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 MGAT4DA6NG13 374 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 A8MV72 311 aaPredicted RBP4.95□□□□□ -1.62
CLIP1-217ENST00000543205 B4DGG1 531 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 PRMT5O14744 637 aaPredicted RBP4.95□□□□□ -1.62
CLIP1-217ENST00000543205 TXNL1O43396 289 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 TRIM16O95361 564 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 FTH1P02794 183 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms