RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 OR5H15A6NDH6 313 aa12.4□□□□□ -0.42
RTN3-212ENST00000543123 NDC80O14777 642 aa12.4□□□□□ -0.42
RTN3-212ENST00000543123 LRRTM2O43300 516 aa12.4□□□□□ -0.42
RTN3-212ENST00000543123 PRAMEF2O60811 474 aa12.4□□□□□ -0.42
RTN3-212ENST00000543123 JRKO75564 520 aa12.4□□□□□ -0.42
RTN3-212ENST00000543123 SEC24DO94855 1032 aaPredicted RBP12.4□□□□□ -0.42
RTN3-212ENST00000543123 CLDN1O95832 211 aa12.4□□□□□ -0.42
RTN3-212ENST00000543123 AHSGP02765 367 aa12.4□□□□□ -0.42
RTN3-212ENST00000543123 STATHP02808 62 aa12.4□□□□□ -0.42
RTN3-212ENST00000543123 ITGAMP11215 1152 aa12.4□□□□□ -0.42
RTN3-212ENST00000543123 RGS1Q08116 209 aa12.4□□□□□ -0.42
RTN3-212ENST00000543123 ILF2Q12905 390 aaKnown RBP12.4□□□□□ -0.42
RTN3-212ENST00000543123 PWP1Q13610 501 aa12.4□□□□□ -0.42
RTN3-212ENST00000543123 BTBD16Q32M84 506 aa12.4□□□□□ -0.42
RTN3-212ENST00000543123 RBM20Q5T481 1227 aaKnown RBP12.4□□□□□ -0.42
RTN3-212ENST00000543123 HIST2H2BCQ6DN03 193 aa12.4□□□□□ -0.42
RTN3-212ENST00000543123 MBOAT1Q6ZNC8 495 aa12.4□□□□□ -0.42
RTN3-212ENST00000543123 GPATCH11Q8N954 259 aa12.4□□□□□ -0.42
RTN3-212ENST00000543123 MFSD9Q8NBP5 474 aa12.4□□□□□ -0.42
RTN3-212ENST00000543123 ABHD11Q8NFV4 315 aa12.4□□□□□ -0.42
RTN3-212ENST00000543123 DNAJB8Q8NHS0 232 aa12.4□□□□□ -0.42
RTN3-212ENST00000543123 ZCCHC10Q8TBK6 192 aa12.4□□□□□ -0.42
RTN3-212ENST00000543123 NR4A3Q92570 626 aa12.4□□□□□ -0.42
RTN3-212ENST00000543123 TM4SF19Q96DZ7 209 aa12.4□□□□□ -0.42
RTN3-212ENST00000543123 IMMP1LQ96LU5 166 aa12.4□□□□□ -0.42
RTN3-212ENST00000543123 ZNF354BQ96LW1 612 aa12.4□□□□□ -0.42
RTN3-212ENST00000543123 CYTH2Q99418 400 aa12.4□□□□□ -0.42
RTN3-212ENST00000543123 PLA2G3Q9NZ20 509 aa12.4□□□□□ -0.42
RTN3-212ENST00000543123 MYO9AB2RTY4 2548 aa12.4□□□□□ -0.42
RTN3-212ENST00000543123 TRBC2A0A5B9 178 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 FEZF1A0PJY2 475 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 SGK494L7N484 410 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 NDUFS4O43181 175 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 RDH16O75452 317 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 RASAL1O95294 804 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 MLYCDO95822 493 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 WDPCPO95876 746 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 STSP08842 583 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 NPPBP16860 134 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 JAK1P23458 1154 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 GABRB3P28472 473 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 ARL4CP56559 192 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 TIAL1Q01085 375 aaKnown RBP eCLIP12.39□□□□□ -0.43
RTN3-212ENST00000543123 FRG1Q14331 258 aaKnown RBP12.39□□□□□ -0.43
RTN3-212ENST00000543123 CSHL1Q14406 222 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 PHKG1Q16816 387 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.39□□□□□ -0.43
RTN3-212ENST00000543123 HECTD2Q5U5R9 776 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 ABHD13Q7L211 337 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 PRSS41Q7RTY9 318 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 STRA8Q7Z7C7 330 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 SLC26A11Q86WA9 606 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 SLC34A3Q8N130 599 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 FBXL8Q96CD0 374 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 CFAP36Q96G28 342 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 SNF8Q96H20 258 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 SARGQ9BW04 601 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 STMN3Q9NZ72 180 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 ZFATQ9P243 1243 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 CHMP2BQ9UQN3 213 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 VWA7Q9Y334 891 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 NAALAD2Q9Y3Q0 740 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 ITPR2Q14571 2701 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 CPAMD8Q8IZJ3 1885 aa12.39□□□□□ -0.43
RTN3-212ENST00000543123 SVILO95425 2214 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 URADA6NGE7 173 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 A8MUI8 341 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 OR1F1O43749 312 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 BANF1O75531 89 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 TSPAN12O95859 305 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 CELA2AP08217 269 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 DCTP40126 519 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 ELK3P41970 407 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 TAS2R50P59544 299 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 DR1Q01658 176 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 RBPJQ06330 500 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 ACTN3Q08043 901 aaPredicted RBP12.38□□□□□ -0.43
RTN3-212ENST00000543123 ABRAXAS2Q15018 415 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 NSDHLQ15738 373 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 MSS51Q4VC12 460 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 TEDDM1Q5T9Z0 273 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 MTFR2Q6P444 385 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 LANCL3Q6ZV70 420 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 ANKRD37Q7Z713 158 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 SLC5A8Q8N695 610 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 HORMAD2Q8N7B1 307 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 KCT2Q8NC54 265 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 OR4K1Q8NGD4 311 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 OR56A3Q8NH54 315 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 M1APQ8TC57 530 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 SLC5A11Q8WWX8 675 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 ANKRD7Q92527 254 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 PDLIM5Q96HC4 596 aaKnown RBP12.38□□□□□ -0.43
RTN3-212ENST00000543123 LPAR4Q99677 370 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 MACROD1Q9BQ69 325 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 CLK4Q9HAZ1 481 aaKnown RBP12.38□□□□□ -0.43
RTN3-212ENST00000543123 KCNK13Q9HB14 408 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 MMP25Q9NPA2 562 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 NSMCE4AQ9NXX6 385 aa12.38□□□□□ -0.43
RTN3-212ENST00000543123 SUCOQ9UBS9 1254 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms