RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 HSMCR30P0CW71 290 aa8.83□□□□□ -1
THBS3-211ENST00000541990 PPP3CCP48454 512 aa8.83□□□□□ -1
THBS3-211ENST00000541990 RENBPP51606 427 aa8.83□□□□□ -1
THBS3-211ENST00000541990 KEAP1Q14145 624 aa8.83□□□□□ -1
THBS3-211ENST00000541990 TYSND1Q2T9J0 566 aa8.83□□□□□ -1
THBS3-211ENST00000541990 CEP78Q5JTW2 689 aa8.83□□□□□ -1
THBS3-211ENST00000541990 LY6G5CQ5SRR4 150 aa8.83□□□□□ -1
THBS3-211ENST00000541990 SNX20Q7Z614 316 aa8.83□□□□□ -1
THBS3-211ENST00000541990 MTFMTQ96DP5 389 aaKnown RBP8.83□□□□□ -1
THBS3-211ENST00000541990 EGLN2Q96KS0 407 aa8.83□□□□□ -1
THBS3-211ENST00000541990 KCNC2Q96PR1 638 aa8.83□□□□□ -1
THBS3-211ENST00000541990 C1QTNF3Q9BXJ4 246 aa8.83□□□□□ -1
THBS3-211ENST00000541990 ROGDIQ9GZN7 287 aa8.83□□□□□ -1
THBS3-211ENST00000541990 CCDC177Q9NQR7 707 aaPredicted RBP8.83□□□□□ -1
THBS3-211ENST00000541990 C1orf109Q9NX04 203 aa8.83□□□□□ -1
THBS3-211ENST00000541990 NUP214P35658 2090 aaPredicted RBP8.83□□□□□ -1
THBS3-211ENST00000541990 PLXNA3P51805 1871 aa8.83□□□□□ -1
THBS3-211ENST00000541990 TRBV5-3A0A0A0MS03 114 aa8.83□□□□□ -1
THBS3-211ENST00000541990 SEC22BO75396 215 aa8.83□□□□□ -1
THBS3-211ENST00000541990 ALPIP09923 528 aa8.83□□□□□ -1
THBS3-211ENST00000541990 NAT1P18440 290 aa8.83□□□□□ -1
THBS3-211ENST00000541990 EFNA1P20827 205 aaPredicted RBP8.83□□□□□ -1
THBS3-211ENST00000541990 HLA-FP30511 346 aa8.83□□□□□ -1
THBS3-211ENST00000541990 CA5AP35218 305 aa8.83□□□□□ -1
THBS3-211ENST00000541990 RFX2P48378 723 aa8.83□□□□□ -1
THBS3-211ENST00000541990 HSPA7P48741 367 aa8.83□□□□□ -1
THBS3-211ENST00000541990 ZNF135P52742 658 aaPredicted RBP8.83□□□□□ -1
THBS3-211ENST00000541990 RING1Q06587 406 aa8.83□□□□□ -1
THBS3-211ENST00000541990 LMAN2Q12907 356 aa8.83□□□□□ -1
THBS3-211ENST00000541990 TBRG1Q3YBR2 411 aa8.83□□□□□ -1
THBS3-211ENST00000541990 OR2T5Q6IEZ7 315 aa8.83□□□□□ -1
THBS3-211ENST00000541990 SLC46A3Q7Z3Q1 461 aa8.83□□□□□ -1
THBS3-211ENST00000541990 PLPP6Q8IY26 295 aa8.83□□□□□ -1
THBS3-211ENST00000541990 ATG16L2Q8NAA4 619 aa8.83□□□□□ -1
THBS3-211ENST00000541990 GPR150Q8NGU9 434 aa8.83□□□□□ -1
THBS3-211ENST00000541990 OR2T29Q8NH02 315 aa8.83□□□□□ -1
THBS3-211ENST00000541990 CD200R1Q8TD46 325 aa8.83□□□□□ -1
THBS3-211ENST00000541990 CHAC2Q8WUX2 184 aa8.83□□□□□ -1
THBS3-211ENST00000541990 FAM120BQ96EK7 910 aaKnown RBP8.83□□□□□ -1
THBS3-211ENST00000541990 OR2A14Q96R47 310 aa8.83□□□□□ -1
THBS3-211ENST00000541990 OR52E6Q96RD3 313 aa8.83□□□□□ -1
THBS3-211ENST00000541990 CPPED1Q9BRF8 314 aaPredicted RBP8.83□□□□□ -1
THBS3-211ENST00000541990 NXF2Q9GZY0 626 aaKnown RBP8.83□□□□□ -1
THBS3-211ENST00000541990 SYTL2Q9HCH5 934 aa8.83□□□□□ -1
THBS3-211ENST00000541990 RAD18Q9NS91 495 aa8.83□□□□□ -1
THBS3-211ENST00000541990 GPR83Q9NYM4 423 aa8.83□□□□□ -1
THBS3-211ENST00000541990 WBP11Q9Y2W2 641 aaKnown RBP8.83□□□□□ -1
THBS3-211ENST00000541990 PCDHGA6Q9Y5G7 932 aa8.83□□□□□ -1
THBS3-211ENST00000541990 ANAPC1Q9H1A4 1944 aa8.82□□□□□ -1
THBS3-211ENST00000541990 TRAV19A0A0A6YYK7 116 aa8.82□□□□□ -1
THBS3-211ENST00000541990 WASH3PC4AMC7 463 aa8.82□□□□□ -1
THBS3-211ENST00000541990 ARHGAP33O14559 1287 aa8.82□□□□□ -1
THBS3-211ENST00000541990 ICMTO60725 284 aa8.82□□□□□ -1
THBS3-211ENST00000541990 ALX3O95076 343 aa8.82□□□□□ -1
THBS3-211ENST00000541990 RETP07949 1114 aa8.82□□□□□ -1
THBS3-211ENST00000541990 STSP08842 583 aa8.82□□□□□ -1
THBS3-211ENST00000541990 S100A5P33763 92 aa8.82□□□□□ -1
THBS3-211ENST00000541990 UGT2B10P36537 528 aa8.82□□□□□ -1
THBS3-211ENST00000541990 MAGEA2P43356 314 aa8.82□□□□□ -1
THBS3-211ENST00000541990 CXCR4P61073 352 aa8.82□□□□□ -1
THBS3-211ENST00000541990 CHRNEQ04844 493 aa8.82□□□□□ -1
THBS3-211ENST00000541990 PRKCDQ05655 676 aa8.82□□□□□ -1
THBS3-211ENST00000541990 FOXD4Q12950 439 aaPredicted RBP8.82□□□□□ -1
THBS3-211ENST00000541990 GPR50Q13585 617 aa8.82□□□□□ -1
THBS3-211ENST00000541990 TAB1Q15750 504 aa8.82□□□□□ -1
THBS3-211ENST00000541990 RFX4Q33E94 735 aa8.82□□□□□ -1
THBS3-211ENST00000541990 KIAA1614Q5VZ46 1190 aa8.82□□□□□ -1
THBS3-211ENST00000541990 CCDC149Q6ZUS6 474 aa8.82□□□□□ -1
THBS3-211ENST00000541990 C12orf40Q86WS4 652 aa8.82□□□□□ -1
THBS3-211ENST00000541990 CALHM3Q86XJ0 350 aa8.82□□□□□ -1
THBS3-211ENST00000541990 OR8H2Q8N162 312 aa8.82□□□□□ -1
THBS3-211ENST00000541990 HCAR2Q8TDS4 363 aa8.82□□□□□ -1
THBS3-211ENST00000541990 RMDN1Q96DB5 314 aa8.82□□□□□ -1
THBS3-211ENST00000541990 TRMT2BQ96GJ1 504 aaKnown RBP8.82□□□□□ -1
THBS3-211ENST00000541990 RNF170Q96K19 258 aa8.82□□□□□ -1
THBS3-211ENST00000541990 DPH2Q9BQC3 489 aaPredicted RBP8.82□□□□□ -1
THBS3-211ENST00000541990 BBS2Q9BXC9 721 aa8.82□□□□□ -1
THBS3-211ENST00000541990 DPY30Q9C005 99 aa8.82□□□□□ -1
THBS3-211ENST00000541990 IRF2BPLQ9H1B7 796 aa8.82□□□□□ -1
THBS3-211ENST00000541990 POPDC3Q9HBV1 291 aa8.82□□□□□ -1
THBS3-211ENST00000541990 RANGRFQ9HD47 186 aaPredicted RBP8.82□□□□□ -1
THBS3-211ENST00000541990 SERHLQ9NQF3 203 aa8.82□□□□□ -1
THBS3-211ENST00000541990 KRT84Q9NSB2 600 aa8.82□□□□□ -1
THBS3-211ENST00000541990 TMEM184CQ9NVA4 438 aa8.82□□□□□ -1
THBS3-211ENST00000541990 GPRC5BQ9NZH0 403 aa8.82□□□□□ -1
THBS3-211ENST00000541990 MUTYHQ9UIF7 546 aa8.82□□□□□ -1
THBS3-211ENST00000541990 MOSPD1Q9UJG1 213 aa8.82□□□□□ -1
THBS3-211ENST00000541990 SAMHD1Q9Y3Z3 626 aaKnown RBP8.82□□□□□ -1
THBS3-211ENST00000541990 GRXCR2A6NFK2 248 aa8.82□□□□□ -1
THBS3-211ENST00000541990 UPK3BL1B0FP48 263 aa8.82□□□□□ -1
THBS3-211ENST00000541990 UPK3BL2E5RIL1 263 aa8.82□□□□□ -1
THBS3-211ENST00000541990 MEN1O00255 615 aa8.82□□□□□ -1
THBS3-211ENST00000541990 LRATO95237 230 aa8.82□□□□□ -1
THBS3-211ENST00000541990 ABCB1P08183 1280 aaPredicted RBP8.82□□□□□ -1
THBS3-211ENST00000541990 AKT1P31749 480 aa8.82□□□□□ -1
THBS3-211ENST00000541990 CHRDL2Q6WN34 429 aa8.82□□□□□ -1
THBS3-211ENST00000541990 NEK10Q6ZWH5 1172 aa8.82□□□□□ -1
THBS3-211ENST00000541990 EFL1Q7Z2Z2 1120 aaKnown RBP8.82□□□□□ -1
THBS3-211ENST00000541990 LPCAT1Q8NF37 534 aa8.82□□□□□ -1
THBS3-211ENST00000541990 MDGA1Q8NFP4 955 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms