RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 MATN1P21941 496 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 TEAD1P28347 426 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 CTNNA1P35221 906 aaKnown RBP5.28□□□□□ -1.56
CPSF7-220ENST00000541963 TRIM23P36406 574 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 CD86P42081 329 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 GPR1P46091 355 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 ATP5OP48047 213 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 PCP4P48539 62 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 PRKAA2P54646 552 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 KIAA1024LP59773 190 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 SEMG2Q02383 582 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 CDK18Q07002 472 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 DPTQ07507 201 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 NIPAL4Q0D2K0 466 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 RALGDSQ12967 914 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 DNASE1L3Q13609 305 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 PRPSAP1Q14558 356 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 CNGA3Q16281 694 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 HECTD2Q5U5R9 776 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 ITPRIPL1Q6GPH6 555 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 RAET1GQ6H3X3 334 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 GRHL2Q6ISB3 625 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 BBS12Q6ZW61 710 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 SLC29A4Q7RTT9 530 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 CDKL3Q8IVW4 592 aaPredicted RBP5.28□□□□□ -1.56
CPSF7-220ENST00000541963 TEX19Q8NA77 164 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 ZNF548Q8NEK5 533 aaPredicted RBP5.28□□□□□ -1.56
CPSF7-220ENST00000541963 LPCAT1Q8NF37 534 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 OR6C4Q8NGE1 309 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 OR56A4Q8NGH8 313 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 KIF18AQ8NI77 898 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 ARRDC2Q8TBH0 407 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 HTR3CQ8WXA8 447 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 CTHRC1Q96CG8 243 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 AP2M1Q96CW1 435 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 DTD2Q96FN9 168 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 IMP4Q96G21 291 aaKnown RBP5.28□□□□□ -1.56
CPSF7-220ENST00000541963 APOLD1Q96LR9 279 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 HS6ST2Q96MM7 605 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 OLFM3Q96PB7 478 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 MCCC1Q96RQ3 725 aaPredicted RBP5.28□□□□□ -1.56
CPSF7-220ENST00000541963 LYSMD1Q96S90 227 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 HEMGNQ9BXL5 484 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 FSD1LQ9BXM9 530 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 TDRD1Q9BXT4 1180 aaKnown RBP5.28□□□□□ -1.56
CPSF7-220ENST00000541963 OSBPL8Q9BZF1 889 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 WDR26Q9H7D7 661 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 SYBUQ9NX95 663 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 PKD2L2Q9NZM6 624 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 KLHL8Q9P2G9 620 aaPredicted RBP5.28□□□□□ -1.56
CPSF7-220ENST00000541963 FAM153AQ9UHL3 310 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 MOSPD1Q9UJG1 213 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 TFR2Q9UP52 801 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 OR1A2Q9Y585 309 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 GVINP1Q7Z2Y8 2422 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 FRYLO94915 3013 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 COL5A1P20908 1838 aaPredicted RBP5.27□□□□□ -1.57
CPSF7-220ENST00000541963 TP53BP1Q12888 1972 aaPredicted RBP5.27□□□□□ -1.57
CPSF7-220ENST00000541963 TDRD6O60522 2096 aaKnown RBP5.27□□□□□ -1.57
CPSF7-220ENST00000541963 C1orf232A0A0U1RR37 186 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 MACROD2A1Z1Q3 448 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 NPIPB15A6NHN6 443 aaPredicted RBP5.27□□□□□ -1.57
CPSF7-220ENST00000541963 B9A039 149 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 LMO7DNF2Z398 122 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 H0YIZ8 118 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 ANXA9O76027 345 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 CLDN7O95471 211 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 EPOP01588 193 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 PROS1P07225 676 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 TUBBP07437 444 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 PTPN3P26045 913 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 GRK5P34947 590 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 ACADVLP49748 655 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 DIO1P49895 249 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 EIF3EP60228 445 aaKnown RBP5.27□□□□□ -1.57
CPSF7-220ENST00000541963 ZBTB17Q13105 803 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 DNAJC3Q13217 504 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 C1orf61Q13536 156 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 ZNF169Q14929 603 aaPredicted RBP5.27□□□□□ -1.57
CPSF7-220ENST00000541963 SMAD1Q15797 465 aaKnown RBP5.27□□□□□ -1.57
CPSF7-220ENST00000541963 DEFB133Q30KQ1 61 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 ZDHHC20Q5W0Z9 365 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 LRRC66Q68CR7 880 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 DGAT2L7PQ6IED9 249 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 WDR93Q6P2C0 686 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 ACSM6Q6P461 480 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 KIRREL2Q6UWL6 708 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 DHRS13Q6UX07 377 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 CCNI2Q6ZMN8 369 aaPredicted RBP5.27□□□□□ -1.57
CPSF7-220ENST00000541963 HSD11B1LQ7Z5J1 315 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 TECPR1Q7Z6L1 1165 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 TAF8Q7Z7C8 310 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 ULK2Q8IYT8 1036 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 OR52L2PQ8NGH6 319 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 CEP70Q8NHQ1 597 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 NEU4Q8WWR8 484 aaPredicted RBP5.27□□□□□ -1.57
CPSF7-220ENST00000541963 KRT35Q92764 455 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 NAT6Q93015 286 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 TSACCQ96A04 125 aaPredicted RBP5.27□□□□□ -1.57
CPSF7-220ENST00000541963 HIC2Q96JB3 615 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms