RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 IKZF5Q9H5V7 419 aa14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 UBE2ZQ9H832 354 aaPredicted RBP14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 CARS2Q9HA77 564 aaKnown RBP14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 MBNL1Q9NR56 388 aaKnown RBP14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 WBP11Q9Y2W2 641 aaKnown RBP14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 HS3ST3A1Q9Y663 406 aa14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 CXCR6O00574 342 aa14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 MYO1DO94832 1006 aa14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 SLC35G4P0C7Q5 338 aa14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 THRBP10828 461 aa14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 AMD1P17707 334 aa14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 PBLDP30039 288 aaPredicted RBP14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 IGFALSP35858 605 aa14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 ASMTP46597 345 aa14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 RGS19P49795 217 aa14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 NUP107P57740 925 aa14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 TBPL1P62380 186 aa14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 PHC1P78364 1004 aa14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 PPP2R2BQ00005 443 aa14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 TAP2Q03519 686 aa14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 NFE2L1Q14494 772 aa14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 CPSF6Q16630 551 aaKnown RBP eCLIP14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 COL13A1Q5TAT6 717 aaPredicted RBP14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 GALNT18Q6P9A2 607 aa14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 OR10A6Q8NH74 314 aa14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 GANCQ8TET4 914 aa14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 TFGQ92734 400 aaPredicted RBP14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 ISOC1Q96CN7 298 aa14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 C11orf24Q96F05 449 aaPredicted RBP14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 OR4K3Q96R72 315 aa14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 OR52E6Q96RD3 313 aa14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 BTBD1Q9H0C5 482 aa14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 TMEM9Q9P0T7 183 aa14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 USP36Q9P275 1121 aaKnown RBP14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 VPS29Q9UBQ0 182 aa14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 GMEB1Q9Y692 573 aa14.12□□□□□ -0.15
SPOCK3-226ENST00000541354 NPPBP16860 134 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 MTAPQ13126 283 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 NKG7Q16617 165 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 RBM48Q5RL73 367 aaKnown RBP14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 TTC23Q5W5X9 447 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 EP400NLQ6ZTU2 488 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 GAB3Q8WWW8 586 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 SLC5A11Q8WWX8 675 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 ATG10Q9H0Y0 220 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 PIF1Q9H611 641 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 RMND5AQ9H871 391 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 A0A1B0GVG6 124 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 PRAMEF4O60810 478 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 CEACAM5P06731 702 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 PRPS1L1P21108 318 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 ITPKAP23677 461 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 NDUFS1P28331 727 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 RPL3P39023 403 aaKnown RBP14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 SMAD2Q15796 467 aaKnown RBP14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 PRAMEF9Q5VWM5 478 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 CRTC3Q6UUV7 619 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 NXPE4Q6UWF7 544 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 FAM83HQ6ZRV2 1179 aaPredicted RBP14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 CAMKMTQ7Z624 323 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 ZDHHC13Q8IUH4 622 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 LILRA3Q8N6C8 439 aaPredicted RBP14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 KRTCAP2Q8N6L1 136 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 SMPDL3AQ92484 453 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 FAM3CQ92520 227 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 ITCHQ96J02 903 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 MRGPRX1Q96LB2 322 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 THUMPD3Q9BV44 507 aaKnown RBP14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 POLMQ9NP87 494 aaPredicted RBP14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 TMEM98Q9Y2Y6 226 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 PCDHB14Q9Y5E9 798 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 GSTA4O15217 222 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 RPL10P27635 214 aaKnown RBP14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 SRSF11Q05519 484 aaKnown RBP14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 ABHD18Q0P651 414 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 LRRC32Q14392 662 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 ZC3H12BQ5HYM0 836 aaKnown RBP14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 ZNF773Q6PK81 442 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 CHRDL2Q6WN34 429 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 ARHGAP22Q7Z5H3 698 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 REXO5Q96IC2 774 aaKnown RBP14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 ETAA1Q9NY74 926 aa14.11□□□□□ -0.15
SPOCK3-226ENST00000541354 E7EQ34 232 aa14.1□□□□□ -0.15
SPOCK3-226ENST00000541354 G3V2T6 193 aa14.1□□□□□ -0.15
SPOCK3-226ENST00000541354 FPGTO14772 594 aa14.1□□□□□ -0.15
SPOCK3-226ENST00000541354 LATO43561 262 aa14.1□□□□□ -0.15
SPOCK3-226ENST00000541354 CREG1O75629 220 aa14.1□□□□□ -0.15
SPOCK3-226ENST00000541354 MAGEA2P43356 314 aa14.1□□□□□ -0.15
SPOCK3-226ENST00000541354 DGKEP52429 567 aa14.1□□□□□ -0.15
SPOCK3-226ENST00000541354 ARFIP1P53367 373 aa14.1□□□□□ -0.15
SPOCK3-226ENST00000541354 HPCAP84074 193 aa14.1□□□□□ -0.15
SPOCK3-226ENST00000541354 TMEM214Q6NUQ4 689 aaKnown RBP14.1□□□□□ -0.15
SPOCK3-226ENST00000541354 ENPP6Q6UWR7 440 aa14.1□□□□□ -0.15
SPOCK3-226ENST00000541354 SYTL1Q8IYJ3 562 aa14.1□□□□□ -0.15
SPOCK3-226ENST00000541354 KRT78Q8N1N4 520 aa14.1□□□□□ -0.15
SPOCK3-226ENST00000541354 ST13P5Q8NFI4 369 aaPredicted RBP14.1□□□□□ -0.15
SPOCK3-226ENST00000541354 FIG4Q92562 907 aa14.1□□□□□ -0.15
SPOCK3-226ENST00000541354 HDAC2Q92769 488 aaKnown RBP14.1□□□□□ -0.15
SPOCK3-226ENST00000541354 SLC47A1Q96FL8 570 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms