RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 MACROD1Q9BQ69 325 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 AIF1LQ9BQI0 150 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 EFCAB11Q9BUY7 163 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 NT5DC2Q9H857 520 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 SEMA5BQ9P283 1151 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 PDP2Q9P2J9 529 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 ANKMY1Q9P2S6 941 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 STK38LQ9Y2H1 464 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 DNAJC15Q9Y5T4 150 aa8.94□□□□□ -0.98
DDX55-208ENST00000541259 TRBC2A0A5B9 178 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 GMNCA6NCL1 334 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 PIP5K1BO14986 540 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 SHOX2O60902 331 aaPredicted RBP8.93□□□□□ -0.98
DDX55-208ENST00000541259 SNUPNO95149 360 aaKnown RBP8.93□□□□□ -0.98
DDX55-208ENST00000541259 ZBTB11O95625 1053 aaPredicted RBP8.93□□□□□ -0.98
DDX55-208ENST00000541259 TBX6O95947 436 aaPredicted RBP8.93□□□□□ -0.98
DDX55-208ENST00000541259 LINC00032P0C843 101 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 THRAP10827 490 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 CSRP1P21291 193 aaKnown RBP8.93□□□□□ -0.98
DDX55-208ENST00000541259 DRD4P21917 467 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 CXCR2P25025 360 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 SCTRP47872 440 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 GABRA4P48169 554 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 PDX1P52945 283 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 SNRPNP63162 240 aaKnown RBP8.93□□□□□ -0.98
DDX55-208ENST00000541259 CYP4F2P78329 520 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 BTKQ06187 659 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 ZFP36L1Q07352 338 aaKnown RBP8.93□□□□□ -0.98
DDX55-208ENST00000541259 PAGE2BQ5JRK9 111 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 PHF19Q5T6S3 580 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 VWA5B1Q5TIE3 1220 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 FRG2Q64ET8 278 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 MED27Q6P2C8 311 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 DHRS13Q6UX07 377 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 RNF44Q7L0R7 432 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 DGLUCYQ7Z3D6 616 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 PRSS42Q7Z5A4 293 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 ARHGAP22Q7Z5H3 698 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 VN1R4Q7Z5H5 301 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.93□□□□□ -0.98
DDX55-208ENST00000541259 MFSD9Q8NBP5 474 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 RFWD2Q8NHY2 731 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 HUS1BQ8NHY5 278 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 PIWIL2Q8TC59 973 aaKnown RBP8.93□□□□□ -0.98
DDX55-208ENST00000541259 TWIST2Q8WVJ9 160 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 SELENOMQ8WWX9 145 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 SLC41A2Q96JW4 573 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 C3orf30Q96M34 536 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 FRG2BQ96QU4 278 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 OR2A5Q96R48 311 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 MTERF1Q99551 399 aaKnown RBP8.93□□□□□ -0.98
DDX55-208ENST00000541259 SLC29A3Q9BZD2 475 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 NUF2Q9BZD4 464 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 AICDAQ9GZX7 198 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 FAM107BQ9H098 131 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 RHBGQ9H310 441 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 ZNF768Q9H5H4 540 aaKnown RBP8.93□□□□□ -0.98
DDX55-208ENST00000541259 NPHS2Q9NP85 383 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 SOHLH2Q9NX45 425 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 GIMAP2Q9UG22 337 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 SNX6Q9UNH7 406 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 CFAP54Q96N23 3096 aa8.93□□□□□ -0.98
DDX55-208ENST00000541259 MAGEB17A8MXT2 336 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 H0YGG7 62 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 SLC30A4O14863 429 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 P2RX6O15547 441 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 ULK1O75385 1050 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 DKK1O94907 266 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 ETHE1O95571 254 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 TGFB1P01137 390 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 KRT6AP02538 564 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 KRT6BP04259 564 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 SERPIND1P05546 499 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 FTH1P19P0C7X4 201 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 EZRP15311 586 aaKnown RBP8.92□□□□□ -0.98
DDX55-208ENST00000541259 FOLR1P15328 257 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 NELFEP18615 380 aaKnown RBP8.92□□□□□ -0.98
DDX55-208ENST00000541259 GRK3P35626 688 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 KRT6CP48668 564 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 VSX2P58304 361 aaPredicted RBP8.92□□□□□ -0.98
DDX55-208ENST00000541259 ARF3P61204 181 aaPredicted RBP8.92□□□□□ -0.98
DDX55-208ENST00000541259 RPS15AP62244 130 aaKnown RBP8.92□□□□□ -0.98
DDX55-208ENST00000541259 RPS13P62277 151 aaKnown RBP8.92□□□□□ -0.98
DDX55-208ENST00000541259 HSD11B2P80365 405 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 CBX1P83916 185 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 E2F1Q01094 437 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 HMGCS1Q01581 520 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 HYAL2Q12891 473 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 IFT88Q13099 833 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 ILKQ13418 452 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 C16orf72Q14CZ0 275 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 GPR19Q15760 415 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 CLPPQ16740 277 aaPredicted RBP8.92□□□□□ -0.98
DDX55-208ENST00000541259 RSPO4Q2I0M5 234 aaPredicted RBP8.92□□□□□ -0.98
DDX55-208ENST00000541259 SLC9B1Q4ZJI4 515 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 CDCP2Q5VXM1 449 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 Q6ZSR9 355 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 MCATQ8IVS2 390 aaKnown RBP8.92□□□□□ -0.98
DDX55-208ENST00000541259 DDIASQ8IXT1 998 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 D2HGDHQ8N465 521 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms