RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 FAM219AQ8IW50 185 aa4.89□□□□□ -1.63
YBX3-210ENST00000540975 C17orf47Q8NEP4 570 aa4.89□□□□□ -1.63
YBX3-210ENST00000540975 OR2L2Q8NH16 312 aa4.89□□□□□ -1.63
YBX3-210ENST00000540975 VPS33AQ96AX1 596 aa4.89□□□□□ -1.63
YBX3-210ENST00000540975 PYCR2Q96C36 320 aa4.89□□□□□ -1.63
YBX3-210ENST00000540975 NXPE2Q96DL1 559 aa4.89□□□□□ -1.63
YBX3-210ENST00000540975 PDLIM5Q96HC4 596 aaKnown RBP4.89□□□□□ -1.63
YBX3-210ENST00000540975 GDAP1L1Q96MZ0 367 aa4.89□□□□□ -1.63
YBX3-210ENST00000540975 FAM129AQ9BZQ8 928 aa4.89□□□□□ -1.63
YBX3-210ENST00000540975 TMX4Q9H1E5 349 aaPredicted RBP4.89□□□□□ -1.63
YBX3-210ENST00000540975 RNF121Q9H920 327 aa4.89□□□□□ -1.63
YBX3-210ENST00000540975 CTSZQ9UBR2 303 aa4.89□□□□□ -1.63
YBX3-210ENST00000540975 NPHP3Q7Z494 1330 aa4.89□□□□□ -1.63
YBX3-210ENST00000540975 A0A1W2PPW3 197 aa4.88□□□□□ -1.63
YBX3-210ENST00000540975 GLTPD2A6NH11 291 aa4.88□□□□□ -1.63
YBX3-210ENST00000540975 PLOD3O60568 738 aa4.88□□□□□ -1.63
YBX3-210ENST00000540975 SAP30O75446 220 aa4.88□□□□□ -1.63
YBX3-210ENST00000540975 LUC7L3O95232 432 aaKnown RBP4.88□□□□□ -1.63
YBX3-210ENST00000540975 CCDC175P0C221 793 aa4.88□□□□□ -1.63
YBX3-210ENST00000540975 STAG3L1P0CL83 205 aa4.88□□□□□ -1.63
YBX3-210ENST00000540975 PTGER3P43115 390 aa4.88□□□□□ -1.63
YBX3-210ENST00000540975 ZNF273Q14593 569 aa4.88□□□□□ -1.63
YBX3-210ENST00000540975 HYAL4Q2M3T9 481 aa4.88□□□□□ -1.63
YBX3-210ENST00000540975 FGD3Q5JSP0 725 aa4.88□□□□□ -1.63
YBX3-210ENST00000540975 ZNF774Q6NX45 483 aa4.88□□□□□ -1.63
YBX3-210ENST00000540975 PPP1R21Q6ZMI0 780 aa4.88□□□□□ -1.63
YBX3-210ENST00000540975 NRARPQ7Z6K4 114 aa4.88□□□□□ -1.63
YBX3-210ENST00000540975 OR8H2Q8N162 312 aa4.88□□□□□ -1.63
YBX3-210ENST00000540975 ABHD12Q8N2K0 398 aa4.88□□□□□ -1.63
YBX3-210ENST00000540975 CCDC63Q8NA47 563 aa4.88□□□□□ -1.63
YBX3-210ENST00000540975 CCDC191Q8NCU4 936 aa4.88□□□□□ -1.63
YBX3-210ENST00000540975 OR4C15Q8NGM1 316 aa4.88□□□□□ -1.63
YBX3-210ENST00000540975 OR10G7Q8NGN6 311 aa4.88□□□□□ -1.63
YBX3-210ENST00000540975 CHPT1Q8WUD6 406 aa4.88□□□□□ -1.63
YBX3-210ENST00000540975 RMDN2Q96LZ7 410 aa4.88□□□□□ -1.63
YBX3-210ENST00000540975 GPN1Q9HCN4 374 aaPredicted RBP4.88□□□□□ -1.63
YBX3-210ENST00000540975 CCDC177Q9NQR7 707 aaPredicted RBP4.88□□□□□ -1.63
YBX3-210ENST00000540975 SLC7A10Q9NS82 523 aa4.88□□□□□ -1.63
YBX3-210ENST00000540975 BAIAP2L1Q9UHR4 511 aa4.88□□□□□ -1.63
YBX3-210ENST00000540975 FBXL4Q9UKA2 621 aa4.88□□□□□ -1.63
YBX3-210ENST00000540975 PILRBQ9UKJ0 227 aa4.88□□□□□ -1.63
YBX3-210ENST00000540975 IGHV4-30-2A0A087WSY4 118 aa4.87□□□□□ -1.63
YBX3-210ENST00000540975 SHISA7A6NL88 538 aa4.87□□□□□ -1.63
YBX3-210ENST00000540975 ECE2O60344 883 aa4.87□□□□□ -1.63
YBX3-210ENST00000540975 PRAF2O60831 178 aa4.87□□□□□ -1.63
YBX3-210ENST00000540975 RECQL5O94762 991 aaPredicted RBP4.87□□□□□ -1.63
YBX3-210ENST00000540975 NXPH4O95158 308 aa4.87□□□□□ -1.63
YBX3-210ENST00000540975 POP4O95707 220 aaKnown RBP4.87□□□□□ -1.63
YBX3-210ENST00000540975 HPRP00739 348 aa4.87□□□□□ -1.63
YBX3-210ENST00000540975 EPORP19235 508 aa4.87□□□□□ -1.63
YBX3-210ENST00000540975 CAPGP40121 348 aa4.87□□□□□ -1.63
YBX3-210ENST00000540975 NOVP48745 357 aa4.87□□□□□ -1.63
YBX3-210ENST00000540975 SULT2A1Q06520 285 aa4.87□□□□□ -1.63
YBX3-210ENST00000540975 CD300CQ08708 224 aa4.87□□□□□ -1.63
YBX3-210ENST00000540975 RIGQ13278 110 aa4.87□□□□□ -1.63
YBX3-210ENST00000540975 FAM174BQ3ZCQ3 159 aa4.87□□□□□ -1.63
YBX3-210ENST00000540975 KRBOX4Q5JUW0 171 aa4.87□□□□□ -1.63
YBX3-210ENST00000540975 C6orf136Q5SQH8 315 aa4.87□□□□□ -1.63
YBX3-210ENST00000540975 PRSS55Q6UWB4 352 aaPredicted RBP4.87□□□□□ -1.63
YBX3-210ENST00000540975 CHURC1Q8WUH1 139 aa4.87□□□□□ -1.63
YBX3-210ENST00000540975 P2RX5Q93086 422 aa4.87□□□□□ -1.63
YBX3-210ENST00000540975 NEDD4LQ96PU5 975 aa4.87□□□□□ -1.63
YBX3-210ENST00000540975 OR10A4Q9H209 315 aa4.87□□□□□ -1.63
YBX3-210ENST00000540975 GNB4Q9HAV0 340 aa4.87□□□□□ -1.63
YBX3-210ENST00000540975 PHPT1Q9NRX4 125 aaPredicted RBP4.87□□□□□ -1.63
YBX3-210ENST00000540975 ZNF510Q9Y2H8 683 aa4.87□□□□□ -1.63
YBX3-210ENST00000540975 ZCCHC6Q5VYS8 1495 aaKnown RBP4.87□□□□□ -1.63
YBX3-210ENST00000540975 SNAP91O60641 907 aa4.86□□□□□ -1.63
YBX3-210ENST00000540975 PENKP01210 267 aaPredicted RBP4.86□□□□□ -1.63
YBX3-210ENST00000540975 EDNRAP25101 427 aa4.86□□□□□ -1.63
YBX3-210ENST00000540975 RAD23AP54725 363 aa4.86□□□□□ -1.63
YBX3-210ENST00000540975 MFAP3P55082 362 aa4.86□□□□□ -1.63
YBX3-210ENST00000540975 MS4A18Q3C1V0 323 aa4.86□□□□□ -1.63
YBX3-210ENST00000540975 ALDH1L2Q3SY69 923 aa4.86□□□□□ -1.63
YBX3-210ENST00000540975 SPECC1Q5M775 1068 aa4.86□□□□□ -1.63
YBX3-210ENST00000540975 ATP1A1-AS1Q5TC04 95 aa4.86□□□□□ -1.63
YBX3-210ENST00000540975 FAM166AQ6J272 317 aa4.86□□□□□ -1.63
YBX3-210ENST00000540975 TTC27Q6P3X3 843 aa4.86□□□□□ -1.63
YBX3-210ENST00000540975 ERN2Q76MJ5 926 aaKnown RBP4.86□□□□□ -1.63
YBX3-210ENST00000540975 CCDC186Q7Z3E2 898 aa4.86□□□□□ -1.63
YBX3-210ENST00000540975 ADCK2Q7Z695 626 aa4.86□□□□□ -1.63
YBX3-210ENST00000540975 FAM131BQ86XD5 332 aa4.86□□□□□ -1.63
YBX3-210ENST00000540975 CCDC89Q8N998 374 aa4.86□□□□□ -1.63
YBX3-210ENST00000540975 NPRL2Q8WTW4 380 aa4.86□□□□□ -1.63
YBX3-210ENST00000540975 NSMAFQ92636 917 aa4.86□□□□□ -1.63
YBX3-210ENST00000540975 TUBB1Q9H4B7 451 aa4.86□□□□□ -1.63
YBX3-210ENST00000540975 TERF2IPQ9NYB0 399 aa4.86□□□□□ -1.63
YBX3-210ENST00000540975 A0A087WZ39 114 aa4.85□□□□□ -1.63
YBX3-210ENST00000540975 HMGB1P1B2RPK0 211 aaPredicted RBP4.85□□□□□ -1.63
YBX3-210ENST00000540975 YES1P07947 543 aa4.85□□□□□ -1.63
YBX3-210ENST00000540975 AOC1P19801 751 aa4.85□□□□□ -1.63
YBX3-210ENST00000540975 RGS19P49795 217 aa4.85□□□□□ -1.63
YBX3-210ENST00000540975 GMPSP49915 693 aaPredicted RBP4.85□□□□□ -1.63
YBX3-210ENST00000540975 TAZQ16635 292 aa4.85□□□□□ -1.63
YBX3-210ENST00000540975 FAM106AQ4KMX7 169 aa4.85□□□□□ -1.63
YBX3-210ENST00000540975 FUT10Q6P4F1 479 aa4.85□□□□□ -1.63
YBX3-210ENST00000540975 C11orf57Q6ZUT1 292 aaPredicted RBP4.85□□□□□ -1.63
YBX3-210ENST00000540975 PIGWQ7Z7B1 504 aa4.85□□□□□ -1.63
YBX3-210ENST00000540975 ABI3BPQ7Z7G0 1075 aa4.85□□□□□ -1.63
YBX3-210ENST00000540975 APCDD1Q8J025 514 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms