RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 SLC14A1Q13336 389 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 COL9A2Q14055 689 aaPredicted RBP11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 MAPKAPK3Q16644 382 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 SPIN4Q56A73 249 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 GALNT18Q6P9A2 607 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 TRIM73Q86UV7 250 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 ADGRF3Q8IZF5 1079 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 CLECL1Q8IZS7 167 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 ABCA7Q8IZY2 2146 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 KNL1Q8NG31 2342 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 FLVCR1-AS1Q8TAF5 88 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 GPBAR1Q8TDU6 330 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 ANKRD27Q96NW4 1050 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 MS4A8Q9BY19 250 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 ALG2Q9H553 416 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 LHX9Q9NQ69 397 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 NMRK1Q9NWW6 199 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 TRNAU1APQ9NX07 287 aaKnown RBP11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 DMTF1Q9Y222 760 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 MAN2B2Q9Y2E5 1009 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 MRPS17Q9Y2R5 130 aaKnown RBP11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 TSC22D4Q9Y3Q8 395 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 PCDHB14Q9Y5E9 798 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 DGKBQ9Y6T7 804 aa11.76□□□□□ -0.53
AP003559.1-201ENST00000540906 NUP214P35658 2090 aaPredicted RBP11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 PRSS51A0A1B0GVH4 220 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 A0A1W2PR77 199 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 TCRBV3S1A0A5B6 114 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 C19orf67A6NJJ6 358 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 SCAMP2O15127 329 aaKnown RBP11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 OR1F1O43749 312 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 KCNH1O95259 989 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 TNFP01375 233 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 KLK1P06870 262 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 CHRM5P08912 532 aaPredicted RBP11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 F3P13726 295 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 COX7A2P14406 83 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 CLNS1AP54105 237 aaKnown RBP11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 EEFSECP57772 596 aaKnown RBP11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 RUNDC3AQ59EK9 446 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 LPCAT4Q643R3 524 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 ADCK2Q7Z695 626 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 UBE3DQ7Z6J8 389 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 SLC9B2Q86UD5 537 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 SPPL2CQ8IUH8 684 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 HOMEZQ8IX15 550 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 KRT78Q8N1N4 520 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 PJA1Q8NG27 643 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 OR2L3Q8NG85 312 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 CREB3L4Q8TEY5 395 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 C16orf78Q8WTQ4 265 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 AIF1LQ9BQI0 150 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 CPPED1Q9BRF8 314 aaPredicted RBP11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 PCBD2Q9H0N5 130 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 CHRDQ9H2X0 955 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 AASDHPPTQ9NRN7 309 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 SIRT5Q9NXA8 310 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 TAAR2Q9P1P5 351 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 STOML1Q9UBI4 398 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 ANGPTL2Q9UKU9 493 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 C15orf41Q9Y2V0 281 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 PCDHB11Q9Y5F2 797 aa11.75□□□□□ -0.53
AP003559.1-201ENST00000540906 CEP192Q8TEP8 1941 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 A0A0G2JN53 185 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 GNG14A0A1W2PPG7 69 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 METTL12A8MUP2 240 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 K7ESF4 209 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 PRPS1L1P21108 318 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 TPP2P29144 1249 aaPredicted RBP11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 C21orf58P58505 322 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 CYP4F3Q08477 520 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 GPR18Q14330 331 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 MPEG1Q2M385 716 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 LRIF1Q5T3J3 769 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 IYDQ6PHW0 289 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 DGLUCYQ7Z3D6 616 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 AMIGO1Q86WK6 493 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 ZNF761Q86XN6 746 aaPredicted RBP11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 CLEC4FQ8N1N0 589 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 LCN9Q8WX39 176 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 UBE2E3Q969T4 207 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 CLDN23Q96B33 292 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 CXorf40BQ96DE9 158 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 ZNF583Q96ND8 569 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 PKP2Q99959 881 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 KCNH6Q9H252 994 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 KLHL31Q9H511 634 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 MRPS30Q9NP92 439 aaKnown RBP11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 MUTYHQ9UIF7 546 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 HEBP2Q9Y5Z4 205 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 A0A096LPI6 279 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 TCRBV5S2A0A599 114 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 MAP3K13O43283 966 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 ZNF217O75362 1048 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 MYO1DO94832 1006 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 PDGFBP01127 241 aaPredicted RBP11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 PEX2P28328 305 aa11.74□□□□□ -0.53
AP003559.1-201ENST00000540906 BSGP35613 385 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms