RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 RNF175Q8N4F7 328 aa16.21■□□□□ 0.19
COPS3-212ENST00000539941 OR2A1Q8NGT9 310 aa16.21■□□□□ 0.19
COPS3-212ENST00000539941 CHTF18Q8WVB6 975 aa16.21■□□□□ 0.19
COPS3-212ENST00000539941 LCN9Q8WX39 176 aa16.21■□□□□ 0.19
COPS3-212ENST00000539941 STARD8Q92502 1023 aa16.21■□□□□ 0.19
COPS3-212ENST00000539941 VPS33AQ96AX1 596 aa16.21■□□□□ 0.19
COPS3-212ENST00000539941 TESCQ96BS2 214 aa16.21■□□□□ 0.19
COPS3-212ENST00000539941 SPNS1Q9H2V7 528 aa16.21■□□□□ 0.19
COPS3-212ENST00000539941 XKR8Q9H6D3 395 aa16.21■□□□□ 0.19
COPS3-212ENST00000539941 SH3GLB1Q9Y371 365 aa16.21■□□□□ 0.19
COPS3-212ENST00000539941 FANCMQ8IYD8 2048 aa16.21■□□□□ 0.19
COPS3-212ENST00000539941 KIR2DS5A0A0G2JLQ3 304 aa16.21■□□□□ 0.18
COPS3-212ENST00000539941 A0A0G2JNG1 304 aa16.21■□□□□ 0.18
COPS3-212ENST00000539941 A0A1W2PR77 199 aa16.21■□□□□ 0.18
COPS3-212ENST00000539941 ASPDHA6ND91 283 aa16.21■□□□□ 0.18
COPS3-212ENST00000539941 KIR2DS3K7RE56 304 aa16.21■□□□□ 0.18
COPS3-212ENST00000539941 TRIM38O00635 465 aa16.21■□□□□ 0.18
COPS3-212ENST00000539941 XRCC1P18887 633 aaPredicted RBP16.21■□□□□ 0.18
COPS3-212ENST00000539941 ME2P23368 584 aa16.21■□□□□ 0.18
COPS3-212ENST00000539941 PTX3P26022 381 aaPredicted RBP16.21■□□□□ 0.18
COPS3-212ENST00000539941 PSMB5P28074 263 aa16.21■□□□□ 0.18
COPS3-212ENST00000539941 AVPR2P30518 371 aa16.21■□□□□ 0.18
COPS3-212ENST00000539941 HOXA6P31267 233 aa16.21■□□□□ 0.18
COPS3-212ENST00000539941 DPP6P42658 865 aa16.21■□□□□ 0.18
COPS3-212ENST00000539941 SESN3P58005 492 aa16.21■□□□□ 0.18
COPS3-212ENST00000539941 HPCAP84074 193 aa16.21■□□□□ 0.18
COPS3-212ENST00000539941 KIR2DS5Q14953 304 aa16.21■□□□□ 0.18
COPS3-212ENST00000539941 ZNF423Q2M1K9 1284 aa16.21■□□□□ 0.18
COPS3-212ENST00000539941 DPY19L1Q2PZI1 675 aa16.21■□□□□ 0.18
COPS3-212ENST00000539941 SAMD4BQ5PRF9 694 aaKnown RBP16.21■□□□□ 0.18
COPS3-212ENST00000539941 AMIGO1Q86WK6 493 aa16.21■□□□□ 0.18
COPS3-212ENST00000539941 HPS6Q86YV9 775 aa16.21■□□□□ 0.18
COPS3-212ENST00000539941 NRG4Q8WWG1 115 aa16.21■□□□□ 0.18
COPS3-212ENST00000539941 JADE3Q92613 823 aa16.21■□□□□ 0.18
COPS3-212ENST00000539941 LRRC58Q96CX6 371 aa16.21■□□□□ 0.18
COPS3-212ENST00000539941 DGCR14Q96DF8 476 aaKnown RBP16.21■□□□□ 0.18
COPS3-212ENST00000539941 NRTNQ99748 197 aa16.21■□□□□ 0.18
COPS3-212ENST00000539941 POT1Q9NUX5 634 aa16.21■□□□□ 0.18
COPS3-212ENST00000539941 CUEDC1Q9NWM3 386 aaPredicted RBP16.21■□□□□ 0.18
COPS3-212ENST00000539941 TAAR2Q9P1P5 351 aa16.21■□□□□ 0.18
COPS3-212ENST00000539941 TMEM181Q9P2C4 612 aa16.21■□□□□ 0.18
COPS3-212ENST00000539941 BCAP29Q9UHQ4 241 aa16.21■□□□□ 0.18
COPS3-212ENST00000539941 POMPQ9Y244 141 aa16.21■□□□□ 0.18
COPS3-212ENST00000539941 C15orf38-AP3S2A0A0A6YYH1 394 aa16.2■□□□□ 0.18
COPS3-212ENST00000539941 FXYD1O00168 92 aa16.2■□□□□ 0.18
COPS3-212ENST00000539941 ETHE1O95571 254 aa16.2■□□□□ 0.18
COPS3-212ENST00000539941 DCNP07585 359 aaKnown RBP16.2■□□□□ 0.18
COPS3-212ENST00000539941 CTSEP14091 401 aa16.2■□□□□ 0.18
COPS3-212ENST00000539941 PRPS1L1P21108 318 aa16.2■□□□□ 0.18
COPS3-212ENST00000539941 GSTM2P28161 218 aa16.2■□□□□ 0.18
COPS3-212ENST00000539941 ASMTP46597 345 aa16.2■□□□□ 0.18
COPS3-212ENST00000539941 AP2B1P63010 937 aa16.2■□□□□ 0.18
COPS3-212ENST00000539941 MEF2AQ02078 507 aaPredicted RBP16.2■□□□□ 0.18
COPS3-212ENST00000539941 NFYCQ13952 458 aa16.2■□□□□ 0.18
COPS3-212ENST00000539941 CCDC92Q53HC0 331 aaPredicted RBP16.2■□□□□ 0.18
COPS3-212ENST00000539941 ADNP2Q6IQ32 1131 aa16.2■□□□□ 0.18
COPS3-212ENST00000539941 LAYNQ6UX15 382 aa16.2■□□□□ 0.18
COPS3-212ENST00000539941 MSANTD1Q6ZTZ1 278 aa16.2■□□□□ 0.18
COPS3-212ENST00000539941 ARPINQ7Z6K5 226 aa16.2■□□□□ 0.18
COPS3-212ENST00000539941 TRIM48Q8IWZ4 208 aa16.2■□□□□ 0.18
COPS3-212ENST00000539941 TTLQ8NG68 377 aa16.2■□□□□ 0.18
COPS3-212ENST00000539941 SLC13A3Q8WWT9 602 aa16.2■□□□□ 0.18
COPS3-212ENST00000539941 SLC22A18Q96BI1 424 aa16.2■□□□□ 0.18
COPS3-212ENST00000539941 SLC45A3Q96JT2 553 aa16.2■□□□□ 0.18
COPS3-212ENST00000539941 SLX1AQ9BQ83 275 aa16.2■□□□□ 0.18
COPS3-212ENST00000539941 ECSITQ9BQ95 431 aa16.2■□□□□ 0.18
COPS3-212ENST00000539941 TWSG1Q9GZX9 223 aa16.2■□□□□ 0.18
COPS3-212ENST00000539941 PRM3Q9NNZ6 103 aa16.2■□□□□ 0.18
COPS3-212ENST00000539941 ADA2Q9NZK5 511 aa16.2■□□□□ 0.18
COPS3-212ENST00000539941 ABCD2Q9UBJ2 740 aa16.2■□□□□ 0.18
COPS3-212ENST00000539941 CCDC163A0A0D9SF12 145 aa16.19■□□□□ 0.18
COPS3-212ENST00000539941 PRAMEF33A0A0G2JMD5 474 aa16.19■□□□□ 0.18
COPS3-212ENST00000539941 ANKDD1BA6NHY2 528 aa16.19■□□□□ 0.18
COPS3-212ENST00000539941 SEMA3DO95025 777 aa16.19■□□□□ 0.18
COPS3-212ENST00000539941 PGRP06401 933 aa16.19■□□□□ 0.18
COPS3-212ENST00000539941 CMPK1P30085 196 aa16.19■□□□□ 0.18
COPS3-212ENST00000539941 TIA1P31483 386 aaKnown RBP eCLIP16.19■□□□□ 0.18
COPS3-212ENST00000539941 CSNK1G2P78368 415 aa16.19■□□□□ 0.18
COPS3-212ENST00000539941 CEACAM7Q14002 265 aa16.19■□□□□ 0.18
COPS3-212ENST00000539941 FAM174BQ3ZCQ3 159 aa16.19■□□□□ 0.18
COPS3-212ENST00000539941 PAGE3Q5JUK9 113 aa16.19■□□□□ 0.18
COPS3-212ENST00000539941 B3GNT6Q6ZMB0 384 aa16.19■□□□□ 0.18
COPS3-212ENST00000539941 SYT12Q8IV01 421 aa16.19■□□□□ 0.18
COPS3-212ENST00000539941 RIMKLAQ8IXN7 391 aa16.19■□□□□ 0.18
COPS3-212ENST00000539941 KRTCAP2Q8N6L1 136 aa16.19■□□□□ 0.18
COPS3-212ENST00000539941 C1orf52Q8N6N3 182 aaKnown RBP16.19■□□□□ 0.18
COPS3-212ENST00000539941 ZNF740Q8NDX6 193 aa16.19■□□□□ 0.18
COPS3-212ENST00000539941 DNAJB8Q8NHS0 232 aa16.19■□□□□ 0.18
COPS3-212ENST00000539941 CCDC124Q96CT7 223 aaKnown RBP16.19■□□□□ 0.18
COPS3-212ENST00000539941 TMEM74Q96NL1 305 aa16.19■□□□□ 0.18
COPS3-212ENST00000539941 TSSK3Q96PN8 268 aa16.19■□□□□ 0.18
COPS3-212ENST00000539941 TCEAL2Q9H3H9 227 aaPredicted RBP16.19■□□□□ 0.18
COPS3-212ENST00000539941 MRPS30Q9NP92 439 aaKnown RBP16.19■□□□□ 0.18
COPS3-212ENST00000539941 TMEM184CQ9NVA4 438 aa16.19■□□□□ 0.18
COPS3-212ENST00000539941 SUCOQ9UBS9 1254 aaKnown RBP16.19■□□□□ 0.18
COPS3-212ENST00000539941 KLF15Q9UIH9 416 aa16.19■□□□□ 0.18
COPS3-212ENST00000539941 SLCO1B1Q9Y6L6 691 aa16.19■□□□□ 0.18
COPS3-212ENST00000539941 TRBC2A0A5B9 178 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 FAM221BA6H8Z2 402 aa16.18■□□□□ 0.18
COPS3-212ENST00000539941 H7BY64 318 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms