RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 RPAP2Q8IXW5 612 aaPredicted RBP3.55□□□□□ -1.84
CCDC7-209ENST00000539197 MINDY1Q8N5J2 469 aa3.55□□□□□ -1.84
CCDC7-209ENST00000539197 ITLN1Q8WWA0 313 aa3.55□□□□□ -1.84
CCDC7-209ENST00000539197 SLC22A18Q96BI1 424 aa3.55□□□□□ -1.84
CCDC7-209ENST00000539197 NUS1Q96E22 293 aa3.55□□□□□ -1.84
CCDC7-209ENST00000539197 TAAR6Q96RI8 345 aa3.55□□□□□ -1.84
CCDC7-209ENST00000539197 TEX12Q9BXU0 123 aa3.55□□□□□ -1.84
CCDC7-209ENST00000539197 PNNQ9H307 717 aaKnown RBP3.55□□□□□ -1.84
CCDC7-209ENST00000539197 CDH20Q9HBT6 801 aa3.55□□□□□ -1.84
CCDC7-209ENST00000539197 CPSF3Q9UKF6 684 aaKnown RBP3.55□□□□□ -1.84
CCDC7-209ENST00000539197 MRPS18CQ9Y3D5 142 aaKnown RBP3.55□□□□□ -1.84
CCDC7-209ENST00000539197 NPHP3Q7Z494 1330 aa3.54□□□□□ -1.84
CCDC7-209ENST00000539197 K7EQG2 157 aa3.54□□□□□ -1.84
CCDC7-209ENST00000539197 RNF103O00237 685 aa3.54□□□□□ -1.84
CCDC7-209ENST00000539197 SAP30O75446 220 aa3.54□□□□□ -1.84
CCDC7-209ENST00000539197 CD22P20273 847 aa3.54□□□□□ -1.84
CCDC7-209ENST00000539197 SAT1P21673 171 aa3.54□□□□□ -1.84
CCDC7-209ENST00000539197 NONOQ15233 471 aaKnown RBP eCLIP3.54□□□□□ -1.84
CCDC7-209ENST00000539197 NPTX1Q15818 432 aa3.54□□□□□ -1.84
CCDC7-209ENST00000539197 C6orf163Q5TEZ5 329 aa3.54□□□□□ -1.84
CCDC7-209ENST00000539197 CYB5D1Q6P9G0 228 aa3.54□□□□□ -1.84
CCDC7-209ENST00000539197 C1orf122Q6ZSJ8 110 aa3.54□□□□□ -1.84
CCDC7-209ENST00000539197 RYBPQ8N488 228 aaPredicted RBP3.54□□□□□ -1.84
CCDC7-209ENST00000539197 CCDC185Q8N715 623 aa3.54□□□□□ -1.84
CCDC7-209ENST00000539197 GBP7Q8N8V2 638 aaPredicted RBP3.54□□□□□ -1.84
CCDC7-209ENST00000539197 OR9Q2Q8NGE9 314 aa3.54□□□□□ -1.84
CCDC7-209ENST00000539197 KCNE4Q8WWG9 221 aa3.54□□□□□ -1.84
CCDC7-209ENST00000539197 PTERQ96BW5 349 aa3.54□□□□□ -1.84
CCDC7-209ENST00000539197 TMCO6Q96DC7 493 aa3.54□□□□□ -1.84
CCDC7-209ENST00000539197 DGAT2Q96PD7 388 aa3.54□□□□□ -1.84
CCDC7-209ENST00000539197 CHCHD6Q9BRQ6 235 aa3.54□□□□□ -1.84
CCDC7-209ENST00000539197 ASB8Q9H765 288 aa3.54□□□□□ -1.84
CCDC7-209ENST00000539197 HAUS2Q9NVX0 235 aa3.54□□□□□ -1.84
CCDC7-209ENST00000539197 GDE1Q9NZC3 331 aa3.54□□□□□ -1.84
CCDC7-209ENST00000539197 KLK11Q9UBX7 282 aa3.54□□□□□ -1.84
CCDC7-209ENST00000539197 PILRAQ9UKJ1 303 aa3.54□□□□□ -1.84
CCDC7-209ENST00000539197 A0A087WZ39 114 aa3.53□□□□□ -1.84
CCDC7-209ENST00000539197 FSD2A1L4K1 749 aa3.53□□□□□ -1.84
CCDC7-209ENST00000539197 A6NCN8 305 aa3.53□□□□□ -1.84
CCDC7-209ENST00000539197 HDAC3O15379 428 aa3.53□□□□□ -1.84
CCDC7-209ENST00000539197 WDHD1O75717 1129 aaPredicted RBP3.53□□□□□ -1.84
CCDC7-209ENST00000539197 C9P02748 559 aa3.53□□□□□ -1.84
CCDC7-209ENST00000539197 GIG44P09565 113 aaPredicted RBP3.53□□□□□ -1.84
CCDC7-209ENST00000539197 SAGP10523 405 aaPredicted RBP3.53□□□□□ -1.84
CCDC7-209ENST00000539197 CAPN3P20807 821 aa3.53□□□□□ -1.84
CCDC7-209ENST00000539197 CLDN15P56746 228 aa3.53□□□□□ -1.84
CCDC7-209ENST00000539197 ABCE1P61221 599 aaKnown RBP3.53□□□□□ -1.84
CCDC7-209ENST00000539197 POLR2LP62875 67 aaKnown RBP3.53□□□□□ -1.84
CCDC7-209ENST00000539197 CHAF1BQ13112 559 aa3.53□□□□□ -1.84
CCDC7-209ENST00000539197 HERC4Q5GLZ8 1057 aaPredicted RBP3.53□□□□□ -1.84
CCDC7-209ENST00000539197 LINC00242Q5T6M2 205 aa3.53□□□□□ -1.84
CCDC7-209ENST00000539197 MARC1Q5VT66 337 aa3.53□□□□□ -1.84
CCDC7-209ENST00000539197 RASGEF1AQ8N9B8 481 aa3.53□□□□□ -1.84
CCDC7-209ENST00000539197 APPL2Q8NEU8 664 aa3.53□□□□□ -1.84
CCDC7-209ENST00000539197 TSACCQ96A04 125 aaPredicted RBP3.53□□□□□ -1.84
CCDC7-209ENST00000539197 C11orf52Q96A22 123 aa3.53□□□□□ -1.84
CCDC7-209ENST00000539197 ZNF830Q96NB3 372 aaPredicted RBP3.53□□□□□ -1.84
CCDC7-209ENST00000539197 SDHCQ99643 169 aaPredicted RBP3.53□□□□□ -1.84
CCDC7-209ENST00000539197 TREX2Q9BQ50 279 aaPredicted RBP3.53□□□□□ -1.84
CCDC7-209ENST00000539197 SDF4Q9BRK5 362 aa3.53□□□□□ -1.84
CCDC7-209ENST00000539197 STRADBQ9C0K7 418 aa3.53□□□□□ -1.84
CCDC7-209ENST00000539197 MOB1AQ9H8S9 216 aa3.53□□□□□ -1.84
CCDC7-209ENST00000539197 MARCH7Q9H992 704 aa3.53□□□□□ -1.84
CCDC7-209ENST00000539197 GSN-AS1Q9NRJ2 163 aa3.53□□□□□ -1.84
CCDC7-209ENST00000539197 HAO2Q9NYQ3 351 aa3.53□□□□□ -1.84
CCDC7-209ENST00000539197 SLC24A2Q9UI40 661 aa3.53□□□□□ -1.84
CCDC7-209ENST00000539197 hCG_38984A0A1B0GV85 526 aa3.52□□□□□ -1.85
CCDC7-209ENST00000539197 MAGEB2O15479 319 aa3.52□□□□□ -1.85
CCDC7-209ENST00000539197 SH3BP5O60239 455 aa3.52□□□□□ -1.85
CCDC7-209ENST00000539197 RPS6KA5O75582 802 aa3.52□□□□□ -1.85
CCDC7-209ENST00000539197 SUPT20HL2P0C7V6 817 aa3.52□□□□□ -1.85
CCDC7-209ENST00000539197 C4BPBP20851 252 aa3.52□□□□□ -1.85
CCDC7-209ENST00000539197 AZGP1P25311 298 aaKnown RBP3.52□□□□□ -1.85
CCDC7-209ENST00000539197 NTRK2Q16620 822 aa3.52□□□□□ -1.85
CCDC7-209ENST00000539197 TMEM44Q2T9K0 475 aa3.52□□□□□ -1.85
CCDC7-209ENST00000539197 TTC31Q49AM3 519 aaPredicted RBP3.52□□□□□ -1.85
CCDC7-209ENST00000539197 ITPRIPL1Q6GPH6 555 aa3.52□□□□□ -1.85
CCDC7-209ENST00000539197 RPAINQ86UA6 219 aa3.52□□□□□ -1.85
CCDC7-209ENST00000539197 CARM1Q86X55 608 aa3.52□□□□□ -1.85
CCDC7-209ENST00000539197 TAGAPQ8N103 731 aa3.52□□□□□ -1.85
CCDC7-209ENST00000539197 KIAA1524Q8TCG1 905 aa3.52□□□□□ -1.85
CCDC7-209ENST00000539197 ZNF285Q96NJ3 590 aa3.52□□□□□ -1.85
CCDC7-209ENST00000539197 MRPL1Q9BYD6 325 aaKnown RBP3.52□□□□□ -1.85
CCDC7-209ENST00000539197 RAVER2Q9HCJ3 691 aaKnown RBP3.52□□□□□ -1.85
CCDC7-209ENST00000539197 DDX25Q9UHL0 483 aaKnown RBP3.52□□□□□ -1.85
CCDC7-209ENST00000539197 TRGV8A0A0C4DH27 118 aa3.51□□□□□ -1.85
CCDC7-209ENST00000539197 A8MV72 311 aaPredicted RBP3.51□□□□□ -1.85
CCDC7-209ENST00000539197 PTGESO14684 152 aa3.51□□□□□ -1.85
CCDC7-209ENST00000539197 KRTAP5-8O75690 187 aa3.51□□□□□ -1.85
CCDC7-209ENST00000539197 ATP6AP2O75787 350 aa3.51□□□□□ -1.85
CCDC7-209ENST00000539197 GSRP00390 522 aa3.51□□□□□ -1.85
CCDC7-209ENST00000539197 CSN3P07498 182 aa3.51□□□□□ -1.85
CCDC7-209ENST00000539197 EPCAMP16422 314 aa3.51□□□□□ -1.85
CCDC7-209ENST00000539197 MATKP42679 507 aa3.51□□□□□ -1.85
CCDC7-209ENST00000539197 RXRGP48443 463 aa3.51□□□□□ -1.85
CCDC7-209ENST00000539197 BTG1P62324 171 aa3.51□□□□□ -1.85
CCDC7-209ENST00000539197 WTAPQ15007 396 aa3.51□□□□□ -1.85
CCDC7-209ENST00000539197 MLF2Q15773 248 aaPredicted RBP3.51□□□□□ -1.85
CCDC7-209ENST00000539197 RILPL1Q5EBL4 403 aa3.51□□□□□ -1.85
CCDC7-209ENST00000539197 ZNF506Q5JVG8 444 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms