RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 MINDY4Q4G0A6 757 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 MFSD4BQ5TF39 518 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 FAAH2Q6GMR7 532 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 CAPN13Q6MZZ7 669 aaPredicted RBP8.17□□□□□ -1.1
DDB1-212ENST00000538470 H3F3CQ6NXT2 135 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 MTFR2Q6P444 385 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 AGTRAPQ6RW13 159 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 CPEB2Q7Z5Q1 589 aaKnown RBP8.17□□□□□ -1.1
DDB1-212ENST00000538470 STRA8Q7Z7C7 330 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 LGI4Q8N135 537 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 TBC1D19Q8N5T2 526 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 ATL1Q8WXF7 558 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 SLCO2A1Q92959 643 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 RELTQ969Z4 430 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 TM4SF19Q96DZ7 209 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 CERS2Q96G23 380 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 MS4A14Q96JA4 679 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 HIST1H2AHQ96KK5 128 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 ZNF354BQ96LW1 612 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 TAAR6Q96RI8 345 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 OSBPL9Q96SU4 736 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 NDNQ99608 321 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 HIST1H2AJQ99878 128 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 H2AFJQ9BTM1 129 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 HCN3Q9P1Z3 774 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 SUCOQ9UBS9 1254 aaKnown RBP8.17□□□□□ -1.1
DDB1-212ENST00000538470 ASIC3Q9UHC3 531 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 ADAMTS6Q9UKP5 1117 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 ENTPD4Q9Y227 616 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 SLC22A7Q9Y694 548 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 LRBAP50851 2863 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 ENO4A6NNW6 628 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 HNRNPRO43390 633 aaKnown RBP8.16□□□□□ -1.1
DDB1-212ENST00000538470 ZG16O60844 167 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 RDH16O75452 317 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 SEC24DO94855 1032 aaPredicted RBP8.16□□□□□ -1.1
DDB1-212ENST00000538470 MLYCDO95822 493 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 CELA2AP08217 269 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 F7P08709 466 aaPredicted RBP8.16□□□□□ -1.1
DDB1-212ENST00000538470 CDH1P12830 882 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 JAK1P23458 1154 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 COL8A1P27658 744 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 CCR8P51685 355 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 IL2P60568 153 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 TIAL1Q01085 375 aaKnown RBP eCLIP8.16□□□□□ -1.1
DDB1-212ENST00000538470 RBPJQ06330 500 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 PDAP1Q13442 181 aaKnown RBP8.16□□□□□ -1.1
DDB1-212ENST00000538470 NAE1Q13564 534 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 PWP1Q13610 501 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 MEP1AQ16819 746 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 BTBD16Q32M84 506 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 DUPD1Q68J44 220 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 FAM45BPQ6NSW5 357 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 RPTNQ6XPR3 784 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 MBOAT1Q6ZNC8 495 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 LANCL3Q6ZV70 420 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 PRSS41Q7RTY9 318 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 ANKRD37Q7Z713 158 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 SLC35F6Q8N357 371 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 C17orf53Q8N3J3 647 aaPredicted RBP8.16□□□□□ -1.1
DDB1-212ENST00000538470 AFAP1L2Q8N4X5 818 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 SLC5A8Q8N695 610 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 MFSD9Q8NBP5 474 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 PLPP5Q8NEB5 264 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 ABHD11Q8NFV4 315 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 ZCCHC10Q8TBK6 192 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 M1APQ8TC57 530 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 FAM45AQ8TCE6 357 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 EEF1AKMT1Q8WVE0 214 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 SLC13A3Q8WWT9 602 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 LRRC39Q96DD0 335 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 LINGO1Q96FE5 620 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 CYTH2Q99418 400 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 TRIM54Q9BYV2 358 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 MMP25Q9NPA2 562 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 PLA2G3Q9NZ20 509 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 SNX12Q9UMY4 172 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 SH2B3Q9UQQ2 575 aa8.16□□□□□ -1.1
DDB1-212ENST00000538470 KLF2Q9Y5W3 355 aaPredicted RBP8.16□□□□□ -1.1
DDB1-212ENST00000538470 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.16□□□□□ -1.1
DDB1-212ENST00000538470 TRBC2A0A5B9 178 aa8.15□□□□□ -1.1
DDB1-212ENST00000538470 FEZF1A0PJY2 475 aa8.15□□□□□ -1.1
DDB1-212ENST00000538470 MAGEB17A8MXT2 336 aa8.15□□□□□ -1.1
DDB1-212ENST00000538470 SGK494L7N484 410 aa8.15□□□□□ -1.1
DDB1-212ENST00000538470 NDUFS4O43181 175 aa8.15□□□□□ -1.1
DDB1-212ENST00000538470 TSPAN12O95859 305 aa8.15□□□□□ -1.1
DDB1-212ENST00000538470 STATHP02808 62 aa8.15□□□□□ -1.1
DDB1-212ENST00000538470 TCP1P17987 556 aaKnown RBP8.15□□□□□ -1.1
DDB1-212ENST00000538470 AHRP35869 848 aa8.15□□□□□ -1.1
DDB1-212ENST00000538470 CA7P43166 264 aa8.15□□□□□ -1.1
DDB1-212ENST00000538470 CDKN2DP55273 166 aa8.15□□□□□ -1.1
DDB1-212ENST00000538470 KCNK10P57789 538 aa8.15□□□□□ -1.1
DDB1-212ENST00000538470 TAS2R50P59544 299 aa8.15□□□□□ -1.1
DDB1-212ENST00000538470 SNRPNP63162 240 aaKnown RBP8.15□□□□□ -1.1
DDB1-212ENST00000538470 RHAGQ02094 409 aa8.15□□□□□ -1.1
DDB1-212ENST00000538470 RGS1Q08116 209 aa8.15□□□□□ -1.1
DDB1-212ENST00000538470 FRG1Q14331 258 aaKnown RBP8.15□□□□□ -1.1
DDB1-212ENST00000538470 MORF4L2Q15014 288 aa8.15□□□□□ -1.1
DDB1-212ENST00000538470 ABRAXAS2Q15018 415 aa8.15□□□□□ -1.1
DDB1-212ENST00000538470 PHKG1Q16816 387 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms