RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 BCAP31P51572 246 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 SELENOWP63302 87 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 TLE2Q04725 743 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 SMN1Q16637 294 aaKnown RBP15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 CCDC71Q8IV32 467 aaPredicted RBP15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 C11orf65Q8NCR3 313 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 HUS1BQ8NHY5 278 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 IRF7Q92985 503 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 CXorf40BQ96DE9 158 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 FOPNLQ96NB1 174 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 TOX2Q96NM4 488 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 VPS35Q96QK1 796 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 CORO1BQ9BR76 489 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 CCM2Q9BSQ5 444 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 RUBCNLQ9H714 662 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 AKIP1Q9NQ31 210 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 ASAH2Q9NR71 780 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 ZNF282Q9UDV7 671 aaPredicted RBP15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 VPS4AQ9UN37 437 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 SLC5A10A0PJK1 596 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 ZNF197O14709 1029 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 PCDHGA12O60330 932 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 WBP4O75554 376 aaKnown RBP15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 LEFTY1O75610 366 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 TIMP2P16035 220 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 IMPA1P29218 277 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 CA8P35219 290 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 PCGF2P35227 344 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 GRK3P35626 688 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 ZNF284Q2VY69 593 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 ZNF648Q5T619 568 aaPredicted RBP15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 SLC39A5Q6ZMH5 540 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 NAGSQ8N159 534 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 RASGEF1AQ8N9B8 481 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 DEFB118Q96PH6 123 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 SIGLEC11Q96RL6 698 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 GABARAPL3Q9BY60 117 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 EPS8L2Q9H6S3 715 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 FBXO8Q9NRD0 319 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 RASSF1Q9NS23 344 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 SIRT5Q9NXA8 310 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 FAM8A1Q9UBU6 413 aa15.45■□□□□ 0.06
CHMP1A-202ENST00000535997 NPC1O15118 1278 aa15.44■□□□□ 0.06
CHMP1A-202ENST00000535997 AXIN1O15169 862 aa15.44■□□□□ 0.06
CHMP1A-202ENST00000535997 PSMB9P28065 219 aa15.44■□□□□ 0.06
CHMP1A-202ENST00000535997 RELAQ04206 551 aa15.44■□□□□ 0.06
CHMP1A-202ENST00000535997 HKDC1Q2TB90 917 aa15.44■□□□□ 0.06
CHMP1A-202ENST00000535997 CCSMST1Q4G0I0 132 aa15.44■□□□□ 0.06
CHMP1A-202ENST00000535997 ARSIQ5FYB1 569 aa15.44■□□□□ 0.06
CHMP1A-202ENST00000535997 EGFLAMQ63HQ2 1017 aa15.44■□□□□ 0.06
CHMP1A-202ENST00000535997 CCDC81Q6ZN84 652 aa15.44■□□□□ 0.06
CHMP1A-202ENST00000535997 UBE2FQ969M7 185 aa15.44■□□□□ 0.06
CHMP1A-202ENST00000535997 PKP4Q99569 1192 aa15.44■□□□□ 0.06
CHMP1A-202ENST00000535997 ZBP1Q9H171 429 aa15.44■□□□□ 0.06
CHMP1A-202ENST00000535997 SH3BP4Q9P0V3 963 aa15.44■□□□□ 0.06
CHMP1A-202ENST00000535997 GNG14A0A1W2PPG7 69 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 TSPAN11A1L157 253 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 TMEM229AB2RXF0 380 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 NTRK1P04629 796 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 IMPDH2P12268 514 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 TYRP14679 529 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 TIA1P31483 386 aaKnown RBP eCLIP15.43■□□□□ 0.066e-7■■□□□ 11.8
CHMP1A-202ENST00000535997 KRT20P35900 424 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 PRLHRP49683 370 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 CTSCP53634 463 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 PNLIPRP1P54315 467 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 VBP1P61758 197 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 TMEM115Q12893 351 aaPredicted RBP15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 FADDQ13158 208 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 DGCR6Q14129 220 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 DEFB115Q30KQ5 88 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 C10orf62Q5T681 223 aaPredicted RBP15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 TECPR1Q7Z6L1 1165 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 ENTHD1Q8IYW4 607 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 GOT1L1Q8NHS2 421 aaPredicted RBP15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 NDNFQ8TB73 568 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 DYNC2LI1Q8TCX1 351 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 GLYATL1Q969I3 302 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 MAL2Q969L2 176 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 REPS1Q96D71 796 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 LGALS12Q96DT0 336 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 MYOCQ99972 504 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 BHLHE41Q9C0J9 482 aaPredicted RBP15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 CLDN24A6NM45 220 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 ADAMDEC1O15204 470 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 NADKO95544 446 aaPredicted RBP15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 FADS2O95864 444 aaKnown RBP15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 POLR2EP19388 210 aaKnown RBP15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 RRM2P31350 389 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 NNMTP40261 264 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 PREPP48147 710 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 PXNP49023 591 aaPredicted RBP15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 ELOAQ14241 798 aaKnown RBP15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 OXA1LQ15070 435 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.43■□□□□ 0.063e-8■■■■■ 30.7
CHMP1A-202ENST00000535997 MLIPQ5VWP3 458 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 MED27Q6P2C8 311 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 SLCO4C1Q6ZQN7 724 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 FAM124AQ86V42 546 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 RBM12BQ8IXT5 1001 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms