RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 LRFN5Q96NI6 719 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 FAM111AQ96PZ2 611 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 RUFY1Q96T51 708 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 EFCAB11Q9BUY7 163 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 SLC7A5P2Q9GIP4 190 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 PITHD1Q9GZP4 211 aaPredicted RBP11.5□□□□□ -0.57
CHD4-203ENST00000535717 NT5DC2Q9H857 520 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 NOL11Q9H8H0 719 aaKnown RBP11.5□□□□□ -0.57
CHD4-203ENST00000535717 TMBIM4Q9HC24 238 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 SSU72Q9NP77 194 aaKnown RBP11.5□□□□□ -0.57
CHD4-203ENST00000535717 CUTCQ9NTM9 273 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 COPG2Q9UBF2 871 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 ZFP69BQ9UJL9 534 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 PADI1Q9ULC6 663 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 SRPK3Q9UPE1 567 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 EPG5Q9HCE0 2579 aa11.5□□□□□ -0.57
CHD4-203ENST00000535717 ITPR1Q14643 2758 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 LOC101059948A0A1B0GTJ6 334 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 GOLGA6L10A6NI86 522 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 PPP6CO00743 305 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 TXNDC9O14530 226 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 DSCR3O14972 297 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 NDUFS4O43181 175 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 KLK10O43240 276 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 SUPT7LO94864 414 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 CCNYL3P0C7X3 344 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 TSPAN8P19075 237 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 ITGAXP20702 1163 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 ALAS2P22557 587 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 STAT5AP42229 794 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 EMP3P54852 163 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 CDH13P55290 713 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 CYP4F2P78329 520 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 TRAF3Q13114 568 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 LAPTM5Q13571 262 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 MPP2Q14168 576 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 PCLAFQ15004 111 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 FAM214AQ32MH5 1076 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 PAGE2BQ5JRK9 111 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 LIPJQ5W064 366 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 ADNP2Q6IQ32 1131 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 LCN10Q6JVE6 187 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 ZNF517Q6ZMY9 492 aaPredicted RBP11.49□□□□□ -0.57
CHD4-203ENST00000535717 VN1R5Q7Z5H4 357 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 VASH2Q86V25 355 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 C10orf107Q8IVU9 208 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.49□□□□□ -0.57
CHD4-203ENST00000535717 KCT2Q8NC54 265 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 CAMKVQ8NCB2 501 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 OR52B6Q8NGF0 335 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 NT5CQ8TCD5 201 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 CREB3L4Q8TEY5 395 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 MR1Q95460 341 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 TLCD1Q96CP7 247 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 DCBLD2Q96PD2 775 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 GBP5Q96PP8 586 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 CDK15Q96Q40 435 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 NLNQ9BYT8 704 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 DPH1Q9BZG8 443 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 STMN4Q9H169 189 aaPredicted RBP11.49□□□□□ -0.57
CHD4-203ENST00000535717 YY1AP1Q9H869 796 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 ACTR8Q9H981 624 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 VIPAS39Q9H9C1 493 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 SEMA4BQ9NPR2 832 aaPredicted RBP11.49□□□□□ -0.57
CHD4-203ENST00000535717 LHX9Q9NQ69 397 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 TXLNGQ9NUQ3 528 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 OXSMQ9NWU1 459 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 NDOR1Q9UHB4 597 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 MRPS2Q9Y399 296 aaKnown RBP11.49□□□□□ -0.57
CHD4-203ENST00000535717 RNF11Q9Y3C5 154 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 ACTL7BQ9Y614 415 aa11.49□□□□□ -0.57
CHD4-203ENST00000535717 FER1L5A0AVI2 2057 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 A0A1B0GTL3 188 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 A0A1B0GX78 115 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 TERTO14746 1132 aaKnown RBP11.48□□□□□ -0.57
CHD4-203ENST00000535717 RRP8O43159 456 aaKnown RBP11.48□□□□□ -0.57
CHD4-203ENST00000535717 UGDHO60701 494 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 CLDN9O95484 217 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 SERPIND1P05546 499 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 KLK3P07288 261 aaPredicted RBP11.48□□□□□ -0.57
CHD4-203ENST00000535717 SLC35G6P0C7Q6 338 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 HNF4AP41235 474 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 ETV4P43268 484 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 ATP1A2P50993 1020 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 CCNG1P51959 295 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 NAGLUP54802 743 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 DNAJB13P59910 316 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 CLCQ05315 142 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 ABHD18Q0P651 414 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 HYAL2Q12891 473 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 SRSF6Q13247 344 aaKnown RBP11.48□□□□□ -0.57
CHD4-203ENST00000535717 PWP1Q13610 501 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 RBBP7Q16576 425 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 HIST2H2ACQ16777 129 aaPredicted RBP11.48□□□□□ -0.57
CHD4-203ENST00000535717 MUM1Q2TAK8 710 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 NKAIN1Q4KMZ8 207 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 MANEAQ5SRI9 462 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 GARNL3Q5VVW2 1013 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 HIST2H2AA3Q6FI13 130 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 GRHL2Q6ISB3 625 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms