RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 FRMD6Q96NE9 622 aa10.57□□□□□ -0.72
CLSTN3-206ENST00000535668 PRAP1Q96NZ9 151 aa10.57□□□□□ -0.72
CLSTN3-206ENST00000535668 SLC30A3Q99726 388 aa10.57□□□□□ -0.72
CLSTN3-206ENST00000535668 STOX2Q9P2F5 926 aaPredicted RBP10.57□□□□□ -0.72
CLSTN3-206ENST00000535668 PCYOX1Q9UHG3 505 aa10.57□□□□□ -0.72
CLSTN3-206ENST00000535668 TRGV8A0A0C4DH27 118 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 TCRBV7S3A2A0A539 114 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 E5RI56 91 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 E9PLN8 166 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 TTI1O43156 1089 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 NPPBP16860 134 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 IGFBP2P18065 325 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 XCR1P46094 333 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 CASP6P55212 293 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 BASP1P80723 227 aaKnown RBP10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 TIAL1Q01085 375 aaKnown RBP eCLIP10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 ZNF33BQ06732 778 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 SNX1Q13596 522 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 HERC3Q15034 1050 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 TERF2Q15554 542 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 SYT16Q17RD7 645 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 LCTLQ6UWM7 567 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 KIAA0408Q6ZU52 694 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 PDSS2Q86YH6 399 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 CNTN4Q8IWV2 1026 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 SLC5A8Q8N695 610 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 POGLUT1Q8NBL1 392 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 TMEM178AQ8NBL3 297 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 OR9A4Q8NGU2 314 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 PHF12Q96QT6 1004 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 DMRTA2Q96SC8 542 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 VKORC1Q9BQB6 163 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 UTP23Q9BRU9 249 aaKnown RBP10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 DESI2Q9BSY9 194 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 RBSNQ9H1K0 784 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 PARVBQ9HBI1 364 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 CCDC177Q9NQR7 707 aaPredicted RBP10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 PLSCR2Q9NRY7 297 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 MEMO1Q9Y316 297 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 NAV3Q8IVL0 2385 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 DNAJC13O75165 2243 aa10.56□□□□□ -0.72
CLSTN3-206ENST00000535668 MAP1AP78559 2803 aaPredicted RBP10.55□□□□□ -0.72
CLSTN3-206ENST00000535668 NIPBLQ6KC79 2804 aaeCLIP10.55□□□□□ -0.72
CLSTN3-206ENST00000535668 IGKV3D-11A0A0A0MRZ8 115 aa10.55□□□□□ -0.72
CLSTN3-206ENST00000535668 ADAM10O14672 748 aa10.55□□□□□ -0.72
CLSTN3-206ENST00000535668 WISP2O76076 250 aa10.55□□□□□ -0.72
CLSTN3-206ENST00000535668 CLDN14O95500 239 aa10.55□□□□□ -0.72
CLSTN3-206ENST00000535668 FGGP02679 453 aa10.55□□□□□ -0.72
CLSTN3-206ENST00000535668 C8GP07360 202 aa10.55□□□□□ -0.72
CLSTN3-206ENST00000535668 AP1S2P56377 157 aa10.55□□□□□ -0.72
CLSTN3-206ENST00000535668 SKP1P63208 163 aa10.55□□□□□ -0.72
CLSTN3-206ENST00000535668 DHX34Q14147 1143 aaKnown RBP10.55□□□□□ -0.72
CLSTN3-206ENST00000535668 USP10Q14694 798 aaKnown RBP10.55□□□□□ -0.72
CLSTN3-206ENST00000535668 CYP1B1Q16678 543 aa10.55□□□□□ -0.72
CLSTN3-206ENST00000535668 BTBD16Q32M84 506 aa10.55□□□□□ -0.72
CLSTN3-206ENST00000535668 ZNF470Q6ECI4 717 aa10.55□□□□□ -0.72
CLSTN3-206ENST00000535668 LANCL3Q6ZV70 420 aa10.55□□□□□ -0.72
CLSTN3-206ENST00000535668 CRLF3Q8IUI8 442 aa10.55□□□□□ -0.72
CLSTN3-206ENST00000535668 EID3Q8N140 333 aa10.55□□□□□ -0.72
CLSTN3-206ENST00000535668 BEST3Q8N1M1 668 aa10.55□□□□□ -0.72
CLSTN3-206ENST00000535668 RASGEF1CQ8N431 466 aa10.55□□□□□ -0.72
CLSTN3-206ENST00000535668 MFSD9Q8NBP5 474 aa10.55□□□□□ -0.72
CLSTN3-206ENST00000535668 ANKRD7Q92527 254 aa10.55□□□□□ -0.72
CLSTN3-206ENST00000535668 PDLIM5Q96HC4 596 aaKnown RBP10.55□□□□□ -0.72
CLSTN3-206ENST00000535668 SIGLEC10Q96LC7 697 aa10.55□□□□□ -0.72
CLSTN3-206ENST00000535668 LPAR4Q99677 370 aa10.55□□□□□ -0.72
CLSTN3-206ENST00000535668 GPAMQ9HCL2 828 aa10.55□□□□□ -0.72
CLSTN3-206ENST00000535668 ASB1Q9Y576 335 aa10.55□□□□□ -0.72
CLSTN3-206ENST00000535668 ABCA2Q9BZC7 2435 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 SYNDIG1LA6NDD5 238 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 GOLGA8KD6RF30 607 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 GOLGA8TH3BQL2 631 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 ASNA1O43681 348 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 NME2P1O60361 137 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 GALR3O60755 368 aaPredicted RBP10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 AVILO75366 819 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 SEC24DO94855 1032 aaPredicted RBP10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 TSPAN12O95859 305 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 SP1P08047 785 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 SMIM10L1P0DMW3 83 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 COX6B1P14854 86 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 CD46P15529 392 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 NME2P22392 152 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 EEF1DP29692 281 aaKnown RBP10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 AHRP35869 848 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 SLC26A5P58743 744 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 TBPL1P62380 186 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 MAT1AQ00266 395 aaKnown RBP10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 OR1C1Q15619 314 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 NSDHLQ15738 373 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 C3AR1Q16581 482 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 SLC25A25Q6KCM7 469 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 CAPN13Q6MZZ7 669 aaPredicted RBP10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 UGT3A1Q6NUS8 523 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 CES3Q6UWW8 571 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 QSOX2Q6ZRP7 698 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 PRSS41Q7RTY9 318 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 ASPGQ86U10 573 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 ZNF227Q86WZ6 799 aa10.54□□□□□ -0.72
CLSTN3-206ENST00000535668 DENND6AQ8IWF6 608 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms