RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 CDC7O00311 574 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 MAP2K7O14733 419 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 PCDH17O14917 1159 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 BMP10O95393 424 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 GUCA1CO95843 209 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 SSTR1P30872 391 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 CASQ1P31415 396 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 CCR8P51685 355 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 CALCOCO2Q13137 446 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 AGAP7PQ5VUJ5 663 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 SYT10Q6XYQ8 523 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 CYS1Q717R9 158 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 ASPGQ86U10 573 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 CUZD1Q86UP6 607 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 PDSS2Q86YH6 399 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 PARP9Q8IXQ6 854 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 NKAPQ8N5F7 415 aaKnown RBP13.31□□□□□ -0.28
SF3B2-215ENST00000534307 EFCAB3Q8N7B9 438 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 KCT2Q8NC54 265 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 CAMKVQ8NCB2 501 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 PPP4R1Q8TF05 950 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 PYROXD1Q8WU10 500 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 NEIL2Q969S2 332 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 ALKBH8Q96BT7 664 aaKnown RBP13.31□□□□□ -0.28
SF3B2-215ENST00000534307 THOC3Q96J01 351 aaKnown RBP13.31□□□□□ -0.28
SF3B2-215ENST00000534307 AGAP4Q96P64 663 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 BARD1Q99728 777 aaKnown RBP13.31□□□□□ -0.28
SF3B2-215ENST00000534307 WDR77Q9BQA1 342 aaPredicted RBP13.31□□□□□ -0.28
SF3B2-215ENST00000534307 TRIM54Q9BYV2 358 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 PHACTR1Q9C0D0 580 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 POPDC3Q9HBV1 291 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 SAYSD1Q9NPB0 183 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 PCDHGA10Q9Y5H3 936 aa13.31□□□□□ -0.28
SF3B2-215ENST00000534307 F8P00451 2351 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 TCRBV9S1A1TA0A576 114 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 TRBC2A0A5B9 178 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 NPEPPSL1A6NEC2 478 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 VPS4BO75351 444 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 JRKO75564 520 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 CYC1P08574 325 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 IL1RNP18510 177 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 SAT1P21673 171 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 GNLYP22749 145 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 SOX11P35716 441 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 AVPR1BP47901 424 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 CDKL1Q00532 357 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 ILF2Q12905 390 aaKnown RBP13.3□□□□□ -0.28
SF3B2-215ENST00000534307 PCOLCEQ15113 449 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 CATSPEREQ5SY80 951 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 ZDHHC24Q6UX98 284 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 CAPN12Q6ZSI9 719 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 NDUFAF7Q7L592 441 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 IQCKQ8N0W5 287 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 ZADH2Q8N4Q0 377 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 AFAP1L2Q8N4X5 818 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 ZNF740Q8NDX6 193 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 SLC13A3Q8WWT9 602 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 PSMF1Q92530 271 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 SNRNP40Q96DI7 357 aaKnown RBP13.3□□□□□ -0.28
SF3B2-215ENST00000534307 MOCOSQ96EN8 888 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 C19orf60Q96EN9 201 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 YIPF2Q9BWQ6 316 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 VN1R1Q9GZP7 353 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 SPNS1Q9H2V7 528 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 MKL2Q9ULH7 1088 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 VPS4AQ9UN37 437 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 OARD1Q9Y530 152 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 SLC22A7Q9Y694 548 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 CNTRLQ7Z7A1 2325 aa13.3□□□□□ -0.28
SF3B2-215ENST00000534307 CPAMD8Q8IZJ3 1885 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 SCN3AQ9NY46 2000 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 NSG1A0A0A6YYJ2 146 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 CTAGE15A4D2H0 777 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 PABPN1LA6NDY0 278 aaKnown RBP13.29□□□□□ -0.28
SF3B2-215ENST00000534307 FAM159BA6NKW6 160 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 TCP11X1B4DZS4 312 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 SGK494L7N484 410 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 KRT38O76015 456 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 KLHL18O94889 574 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 AGFG2O95081 481 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 SERPINA7P05543 415 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 HEXBP07686 556 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 SLC35G6P0C7Q6 338 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 PRR35P0CG20 571 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 VARSP26640 1264 aaKnown RBP13.29□□□□□ -0.28
SF3B2-215ENST00000534307 GRK3P35626 688 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 SCTRP47872 440 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 GPX6P59796 221 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 REEP5Q00765 189 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 POU4F1Q01851 419 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 MEF2AQ02078 507 aaPredicted RBP13.29□□□□□ -0.28
SF3B2-215ENST00000534307 PWP1Q13610 501 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 TRADDQ15628 312 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 TSNQ15631 228 aaKnown RBP13.29□□□□□ -0.28
SF3B2-215ENST00000534307 FAAH2Q6GMR7 532 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 ADAMTSL2Q86TH1 951 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 CTAGE6Q86UF2 777 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 THOC6Q86W42 341 aaKnown RBP13.29□□□□□ -0.28
SF3B2-215ENST00000534307 KBTBD2Q8IY47 623 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 KLHDC8AQ8IYD2 350 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms