RNA–Protein interactions for RNA: ENST00000534131.1

CTSC-209, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-209ENST00000534131 GRM7Q14831 915 aa11.29□□□□□ -0.6
CTSC-209ENST00000534131 CPSF6Q16630 551 aaKnown RBP eCLIP11.29□□□□□ -0.6
CTSC-209ENST00000534131 DEFB110Q30KQ9 67 aa11.29□□□□□ -0.6
CTSC-209ENST00000534131 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.29□□□□□ -0.6
CTSC-209ENST00000534131 GGTA1PQ4G0N0 100 aa11.29□□□□□ -0.6
CTSC-209ENST00000534131 C10orf62Q5T681 223 aaPredicted RBP11.29□□□□□ -0.6
CTSC-209ENST00000534131 YOD1Q5VVQ6 348 aaPredicted RBP11.29□□□□□ -0.6
CTSC-209ENST00000534131 ASPGQ86U10 573 aa11.29□□□□□ -0.6
CTSC-209ENST00000534131 TMEM126BQ8IUX1 230 aa11.29□□□□□ -0.6
CTSC-209ENST00000534131 OR4F6Q8NGB9 312 aa11.29□□□□□ -0.6
CTSC-209ENST00000534131 METTL6Q8TCB7 284 aa11.29□□□□□ -0.6
CTSC-209ENST00000534131 SLC13A3Q8WWT9 602 aa11.29□□□□□ -0.6
CTSC-209ENST00000534131 ZNF501Q96CX3 271 aaPredicted RBP11.29□□□□□ -0.6
CTSC-209ENST00000534131 NXPE2Q96DL1 559 aa11.29□□□□□ -0.6
CTSC-209ENST00000534131 CENPKQ9BS16 269 aa11.29□□□□□ -0.6
CTSC-209ENST00000534131 NDC1Q9BTX1 674 aa11.29□□□□□ -0.6
CTSC-209ENST00000534131 DDA1Q9BW61 102 aa11.29□□□□□ -0.6
CTSC-209ENST00000534131 SCNM1Q9BWG6 230 aa11.29□□□□□ -0.6
CTSC-209ENST00000534131 SLC29A3Q9BZD2 475 aa11.29□□□□□ -0.6
CTSC-209ENST00000534131 ELOVL6Q9H5J4 265 aa11.29□□□□□ -0.6
CTSC-209ENST00000534131 MANSC1Q9H8J5 431 aa11.29□□□□□ -0.6
CTSC-209ENST00000534131 ZBTB26Q9HCK0 441 aa11.29□□□□□ -0.6
CTSC-209ENST00000534131 PFDN4Q9NQP4 134 aa11.29□□□□□ -0.6
CTSC-209ENST00000534131 TXLNGQ9NUQ3 528 aa11.29□□□□□ -0.6
CTSC-209ENST00000534131 NMRK1Q9NWW6 199 aa11.29□□□□□ -0.6
CTSC-209ENST00000534131 SIDT1Q9NXL6 827 aaKnown RBP11.29□□□□□ -0.6
CTSC-209ENST00000534131 PILRAQ9UKJ1 303 aa11.29□□□□□ -0.6
CTSC-209ENST00000534131 SRPK3Q9UPE1 567 aa11.29□□□□□ -0.6
CTSC-209ENST00000534131 NEUROG3Q9Y4Z2 214 aa11.29□□□□□ -0.6
CTSC-209ENST00000534131 FRYQ5TBA9 3013 aa11.29□□□□□ -0.6
CTSC-209ENST00000534131 SPTBP11277 2137 aa11.29□□□□□ -0.6
CTSC-209ENST00000534131 IGF2RP11717 2491 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 KMT2BQ9UMN6 2715 aaPredicted RBP11.28□□□□□ -0.6
CTSC-209ENST00000534131 H0YIV9 168 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 ZSCAN9O15535 394 aaPredicted RBP11.28□□□□□ -0.6
CTSC-209ENST00000534131 OR4F21O95013 312 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 TNFSF15O95150 251 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 ESRRBO95718 433 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 TSPAN8P19075 237 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 ITIH1P19827 911 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 SCTRP47872 440 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 SLC1A6P48664 564 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 WDR4P57081 412 aaKnown RBP11.28□□□□□ -0.6
CTSC-209ENST00000534131 ABCE1P61221 599 aaKnown RBP11.28□□□□□ -0.6
CTSC-209ENST00000534131 STXBP1P61764 594 aaKnown RBP11.28□□□□□ -0.6
CTSC-209ENST00000534131 ZNF33BQ06732 778 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 TGM3Q08188 693 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 PWP1Q13610 501 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 E2F2Q14209 437 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 WASHC2DQ5SRD0 308 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 GARNL3Q5VVW2 1013 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 NIPAL1Q6NVV3 410 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 ZCCHC23Q6ZST2 131 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 CHSY3Q70JA7 882 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 RPS27LQ71UM5 84 aaKnown RBP11.28□□□□□ -0.6
CTSC-209ENST00000534131 PLD3Q8IV08 490 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 CSNK1A1LQ8N752 337 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 BMPERQ8N8U9 685 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 SRFBP1Q8NEF9 429 aaKnown RBP11.28□□□□□ -0.6
CTSC-209ENST00000534131 OR52B6Q8NGF0 335 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 FAM76AQ8TAV0 307 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 LRRC8CQ8TDW0 803 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 AGAP11Q8TF27 550 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 USP7Q93009 1102 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 CLIP3Q96DZ5 547 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 CDK15Q96Q40 435 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 OR2A5Q96R48 311 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 RNF11Q9Y3C5 154 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 MSRB2Q9Y3D2 182 aa11.28□□□□□ -0.6
CTSC-209ENST00000534131 A0A088AWK7 358 aa11.27□□□□□ -0.61
CTSC-209ENST00000534131 NDUFS4O43181 175 aa11.27□□□□□ -0.61
CTSC-209ENST00000534131 LCMT2O60294 686 aaKnown RBP11.27□□□□□ -0.61
CTSC-209ENST00000534131 CPNE3O75131 537 aaKnown RBP11.27□□□□□ -0.61
CTSC-209ENST00000534131 ULK1O75385 1050 aa11.27□□□□□ -0.61
CTSC-209ENST00000534131 CLEC3AO75596 197 aa11.27□□□□□ -0.61
CTSC-209ENST00000534131 SCRG1O75711 98 aa11.27□□□□□ -0.61
CTSC-209ENST00000534131 KLK3P07288 261 aaPredicted RBP11.27□□□□□ -0.61
CTSC-209ENST00000534131 SERPINA6P08185 405 aa11.27□□□□□ -0.61
CTSC-209ENST00000534131 CCNYL3P0C7X3 344 aa11.27□□□□□ -0.61
CTSC-209ENST00000534131 UROSP10746 265 aa11.27□□□□□ -0.61
CTSC-209ENST00000534131 PIM1P11309 404 aaPredicted RBP11.27□□□□□ -0.61
CTSC-209ENST00000534131 EPORP19235 508 aa11.27□□□□□ -0.61
CTSC-209ENST00000534131 ZNF10P21506 573 aaPredicted RBP11.27□□□□□ -0.61
CTSC-209ENST00000534131 BGNP21810 368 aa11.27□□□□□ -0.61
CTSC-209ENST00000534131 CD82P27701 267 aa11.27□□□□□ -0.61
CTSC-209ENST00000534131 BCL6P41182 706 aa11.27□□□□□ -0.61
CTSC-209ENST00000534131 GABRA4P48169 554 aa11.27□□□□□ -0.61
CTSC-209ENST00000534131 ERVPABLB-1P60509 514 aa11.27□□□□□ -0.61
CTSC-209ENST00000534131 CYP4F2P78329 520 aa11.27□□□□□ -0.61
CTSC-209ENST00000534131 TRAF3Q13114 568 aa11.27□□□□□ -0.61
CTSC-209ENST00000534131 DDX39BQ13838 428 aaKnown RBP11.27□□□□□ -0.61
CTSC-209ENST00000534131 RTP5Q14D33 572 aa11.27□□□□□ -0.61
CTSC-209ENST00000534131 ZRSR2Q15696 482 aaKnown RBP11.27□□□□□ -0.61
CTSC-209ENST00000534131 MUM1Q2TAK8 710 aa11.27□□□□□ -0.61
CTSC-209ENST00000534131 ARL13AQ5H913 290 aaPredicted RBP11.27□□□□□ -0.61
CTSC-209ENST00000534131 FRG2Q64ET8 278 aa11.27□□□□□ -0.61
CTSC-209ENST00000534131 FRMPD2BQ6IN97 320 aa11.27□□□□□ -0.61
CTSC-209ENST00000534131 SYVN1Q86TM6 617 aa11.27□□□□□ -0.61
CTSC-209ENST00000534131 CUZD1Q86UP6 607 aa11.27□□□□□ -0.61
CTSC-209ENST00000534131 LAS2Q8IYD9 372 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms