RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 SYTL1Q8IYJ3 562 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 ALG14Q96F25 216 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 CMTM7Q96FZ5 175 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 TPT1P8Q9HAU6 139 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 TAS2R16Q9NYV7 291 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 SH3BP4Q9P0V3 963 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 PCDHGB1Q9Y5G3 927 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 PRRG1O14668 218 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 DLGAP3O95886 979 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 DNTTP04053 509 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 WEE1P30291 646 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 CD70P32970 193 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 MLLT3P42568 568 aaPredicted RBP18.67■□□□□ 0.58
CAPN1-226ENST00000533820 TP53BP2Q13625 1128 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 XKR6Q5GH73 641 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 SNAP47Q5SQN1 464 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.67■□□□□ 0.58
CAPN1-226ENST00000533820 SVOPQ8N4V2 548 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 UBTD2Q8WUN7 234 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 APH1BQ8WW43 257 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 SCAMP4Q969E2 229 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 RAD18Q9NS91 495 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 RLIMQ9NVW2 624 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 FZD4Q9ULV1 537 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 BOLA1Q9Y3E2 137 aa18.67■□□□□ 0.58
CAPN1-226ENST00000533820 TRBV5-4A0A0C4DH59 114 aa18.66■□□□□ 0.58
CAPN1-226ENST00000533820 IDH3BO43837 385 aa18.66■□□□□ 0.58
CAPN1-226ENST00000533820 HOXB9P17482 250 aaPredicted RBP18.66■□□□□ 0.58
CAPN1-226ENST00000533820 ACVR2AP27037 513 aa18.66■□□□□ 0.58
CAPN1-226ENST00000533820 CD40LGP29965 261 aa18.66■□□□□ 0.58
CAPN1-226ENST00000533820 ALDH7A1P49419 539 aaKnown RBP18.66■□□□□ 0.58
CAPN1-226ENST00000533820 CRISP3P54108 245 aa18.66■□□□□ 0.58
CAPN1-226ENST00000533820 KEAP1Q14145 624 aa18.66■□□□□ 0.58
CAPN1-226ENST00000533820 CDKN3Q16667 212 aa18.66■□□□□ 0.58
CAPN1-226ENST00000533820 HKDC1Q2TB90 917 aa18.66■□□□□ 0.58
CAPN1-226ENST00000533820 TSPYL5Q86VY4 417 aaPredicted RBP18.66■□□□□ 0.58
CAPN1-226ENST00000533820 POC5Q8NA72 575 aa18.66■□□□□ 0.58
CAPN1-226ENST00000533820 FAM83FQ8NEG4 500 aaPredicted RBP18.66■□□□□ 0.58
CAPN1-226ENST00000533820 ASIC5Q9NY37 505 aa18.66■□□□□ 0.58
CAPN1-226ENST00000533820 RPS6KA6Q9UK32 745 aa18.66■□□□□ 0.58
CAPN1-226ENST00000533820 RNF6Q9Y252 685 aa18.66■□□□□ 0.58
CAPN1-226ENST00000533820 MFN2O95140 757 aa18.66■□□□□ 0.58
CAPN1-226ENST00000533820 GJA1P17302 382 aa18.66■□□□□ 0.58
CAPN1-226ENST00000533820 CD22P20273 847 aa18.66■□□□□ 0.58
CAPN1-226ENST00000533820 LHCGRP22888 699 aa18.66■□□□□ 0.58
CAPN1-226ENST00000533820 TGFBR2P37173 567 aa18.66■□□□□ 0.58
CAPN1-226ENST00000533820 ETV3P41162 512 aa18.66■□□□□ 0.58
CAPN1-226ENST00000533820 WNT3P56703 355 aa18.66■□□□□ 0.58
CAPN1-226ENST00000533820 HJURPQ8NCD3 748 aaPredicted RBP18.66■□□□□ 0.58
CAPN1-226ENST00000533820 FEVQ99581 238 aa18.66■□□□□ 0.58
CAPN1-226ENST00000533820 CLSTN3Q9BQT9 956 aa18.66■□□□□ 0.58
CAPN1-226ENST00000533820 ZDHHC6Q9H6R6 413 aa18.66■□□□□ 0.58
CAPN1-226ENST00000533820 GPR83Q9NYM4 423 aa18.66■□□□□ 0.58
CAPN1-226ENST00000533820 AP3M1Q9Y2T2 418 aa18.66■□□□□ 0.58
CAPN1-226ENST00000533820 KCNE1BA0A087WTH5 132 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 CENPBD1B2RD01 187 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 SERPINA11Q86U17 422 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 TESCQ96BS2 214 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 SCLYQ96I15 445 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 RDH14Q9HBH5 336 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 RNF186Q9NXI6 227 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 YIPF1Q9Y548 306 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 OR2A25A4D2G3 310 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 DNAJB5O75953 348 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 GRK5P34947 590 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 SLC19A1P41440 591 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 ACSM2AQ08AH3 577 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 ACSM2BQ68CK6 577 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 RGMBQ6NW40 437 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 LYPD8Q6UX82 237 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 DNAJB7Q7Z6W7 309 aaPredicted RBP18.65■□□□□ 0.58
CAPN1-226ENST00000533820 DCAF4L2Q8NA75 395 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 OR4K1Q8NGD4 311 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 MAP6Q96JE9 813 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 STARD7Q9NQZ5 370 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 DNAJC11Q9NVH1 559 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 ZDHHC3Q9NYG2 299 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 SLC6A14Q9UN76 642 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 PCDHGA6Q9Y5G7 932 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 PRPS1L1P21108 318 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 MAPK1P28482 360 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 SERPINB1P30740 379 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 CYP4F8P98187 520 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 LRIT3Q3SXY7 679 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 POM121L1PQ3SYA9 428 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 FAM180BQ6P0A1 224 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 PRSS48Q7RTY5 328 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 TMCO2Q7Z6W1 182 aaPredicted RBP18.65■□□□□ 0.58
CAPN1-226ENST00000533820 NAGSQ8N159 534 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 VN1R3Q9BXE9 311 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 TMEM121BQ9BXQ6 578 aaPredicted RBP18.65■□□□□ 0.58
CAPN1-226ENST00000533820 SMG9Q9H0W8 520 aaKnown RBP18.65■□□□□ 0.58
CAPN1-226ENST00000533820 FBXO8Q9NRD0 319 aa18.65■□□□□ 0.58
CAPN1-226ENST00000533820 MEN1O00255 615 aa18.64■□□□□ 0.57
CAPN1-226ENST00000533820 RGS13O14921 159 aa18.64■□□□□ 0.57
CAPN1-226ENST00000533820 PCDH7O60245 1069 aa18.64■□□□□ 0.57
CAPN1-226ENST00000533820 ETHE1O95571 254 aa18.64■□□□□ 0.57
CAPN1-226ENST00000533820 STSP08842 583 aa18.64■□□□□ 0.57
CAPN1-226ENST00000533820 SERPINA4P29622 427 aa18.64■□□□□ 0.57
CAPN1-226ENST00000533820 CRATP43155 626 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms