RNA–Protein interactions for RNA: ENST00000533666.5

CMTM1-217, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-217ENST00000533666 ADAMTS20P59510 1910 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 HYKKA2RU49 373 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 WDR91A4D1P6 747 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 FITM1A5D6W6 292 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 TMEM114B3SHH9 223 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 STMND1H3BQB6 276 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 NDUFS4O43181 175 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 BRINP1O60477 761 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 CLEC3AO75596 197 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 ESRRBO95718 433 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 KRT6AP02538 564 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 KRT6BP04259 564 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 SERPINE1P05121 402 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 KLK3P07288 261 aaPredicted RBP13.45□□□□□ -0.26
CMTM1-217ENST00000533666 SERPINA6P08185 405 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 CCNYL3P0C7X3 344 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 PCNAP12004 261 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 SPINK2P20155 84 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 NR1D1P20393 614 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 HMOX2P30519 316 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 PIK3CBP42338 1070 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 KRT6CP48668 564 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 ZNF33BQ06732 778 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 TGM3Q08188 693 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 GALNT1Q10472 559 aaPredicted RBP13.45□□□□□ -0.26
CMTM1-217ENST00000533666 TRAF3Q13114 568 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 MPP2Q14168 576 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 RCN2Q14257 317 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 CPSF6Q16630 551 aaKnown RBP eCLIP13.45□□□□□ -0.26
CMTM1-217ENST00000533666 ATG16L1Q676U5 607 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 PWWP2BQ6NUJ5 590 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 LAS2Q8IYD9 372 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 ZNF740Q8NDX6 193 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 OR7G3Q8NG95 312 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 OR4F6Q8NGB9 312 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 OR52B6Q8NGF0 335 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 RAB3IL1Q8TBN0 382 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 PROKR1Q8TCW9 393 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 CCT6BQ92526 530 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 CLIP3Q96DZ5 547 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 PRR11Q96HE9 360 aaPredicted RBP13.45□□□□□ -0.26
CMTM1-217ENST00000533666 DPH2Q9BQC3 489 aaPredicted RBP13.45□□□□□ -0.26
CMTM1-217ENST00000533666 SPRTNQ9H040 489 aaPredicted RBP13.45□□□□□ -0.26
CMTM1-217ENST00000533666 RHBGQ9H310 441 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 ZBTB26Q9HCK0 441 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 APMAPQ9HDC9 416 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 MID1IP1Q9NPA3 183 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 NMRK1Q9NWW6 199 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 CDC14AQ9UNH5 594 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 RNF11Q9Y3C5 154 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 TSC22D4Q9Y3Q8 395 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 ACACAQ13085 2346 aa13.45□□□□□ -0.26
CMTM1-217ENST00000533666 A0A088AWK7 358 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 LOC105369274A0A096LPK9 316 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 LOC102723532A0A0G2JNH3 316 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 A0A1W2PNU3 283 aaPredicted RBP13.44□□□□□ -0.26
CMTM1-217ENST00000533666 CDRT15L2A8MXV6 281 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 C9orf172C9J069 976 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 ZNF749O43361 778 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 LCMT2O60294 686 aaKnown RBP13.44□□□□□ -0.26
CMTM1-217ENST00000533666 NRP2O60462 931 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 CHEK2O96017 543 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 PIM1P11309 404 aaPredicted RBP13.44□□□□□ -0.26
CMTM1-217ENST00000533666 ZNF10P21506 573 aaPredicted RBP13.44□□□□□ -0.26
CMTM1-217ENST00000533666 AGXTP21549 392 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 SLC5A2P31639 672 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 FOXK2Q01167 660 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 ZRSR2Q15696 482 aaKnown RBP13.44□□□□□ -0.26
CMTM1-217ENST00000533666 CHI3L2Q15782 390 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 PRTGQ2VWP7 1150 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 FRG2Q64ET8 278 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 CHSY3Q70JA7 882 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 ABHD13Q7L211 337 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.44□□□□□ -0.26
CMTM1-217ENST00000533666 OR4N4Q8N0Y3 316 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 AFAP1L2Q8N4X5 818 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 SRFBP1Q8NEF9 429 aaKnown RBP13.44□□□□□ -0.26
CMTM1-217ENST00000533666 METTL6Q8TCB7 284 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 NT5CQ8TCD5 201 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 TM4SF19Q96DZ7 209 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 MVB12AQ96EY5 273 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 CDK15Q96Q40 435 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 FRG2BQ96QU4 278 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 C17orf62Q9BQA9 187 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 MLXIPLQ9NP71 852 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 PFDN4Q9NQP4 134 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 CUTCQ9NTM9 273 aa13.44□□□□□ -0.26
CMTM1-217ENST00000533666 INTS9Q9NV88 658 aaKnown RBP13.44□□□□□ -0.26
CMTM1-217ENST00000533666 FOXE1O00358 373 aaPredicted RBP13.43□□□□□ -0.26
CMTM1-217ENST00000533666 ULK1O75385 1050 aa13.43□□□□□ -0.26
CMTM1-217ENST00000533666 STK17BO94768 372 aa13.43□□□□□ -0.26
CMTM1-217ENST00000533666 KIAA0754O94854 1291 aa13.43□□□□□ -0.26
CMTM1-217ENST00000533666 HSPA4LO95757 839 aa13.43□□□□□ -0.26
CMTM1-217ENST00000533666 TSPAN8P19075 237 aa13.43□□□□□ -0.26
CMTM1-217ENST00000533666 CD22P20273 847 aa13.43□□□□□ -0.26
CMTM1-217ENST00000533666 ALAS2P22557 587 aa13.43□□□□□ -0.26
CMTM1-217ENST00000533666 PTX3P26022 381 aaPredicted RBP13.43□□□□□ -0.26
CMTM1-217ENST00000533666 AVPR1BP47901 424 aa13.43□□□□□ -0.26
CMTM1-217ENST00000533666 WDR4P57081 412 aaKnown RBP13.43□□□□□ -0.26
CMTM1-217ENST00000533666 CYP4F2P78329 520 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms