RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 PLD3Q8IV08 490 aa20.83■□□□□ 0.93
VPS51-212ENST00000533656 LAS2Q8IYD9 372 aa20.83■□□□□ 0.93
VPS51-212ENST00000533656 TTC29Q8NA56 475 aaPredicted RBP20.83■□□□□ 0.93
VPS51-212ENST00000533656 CAMKVQ8NCB2 501 aa20.83■□□□□ 0.93
VPS51-212ENST00000533656 OR52B6Q8NGF0 335 aa20.83■□□□□ 0.93
VPS51-212ENST00000533656 USP7Q93009 1102 aa20.83■□□□□ 0.93
VPS51-212ENST00000533656 MECRQ9BV79 373 aa20.83■□□□□ 0.93
VPS51-212ENST00000533656 SPNS1Q9H2V7 528 aa20.83■□□□□ 0.93
VPS51-212ENST00000533656 APMAPQ9HDC9 416 aa20.83■□□□□ 0.93
VPS51-212ENST00000533656 THSD1Q9NS62 852 aa20.83■□□□□ 0.93
VPS51-212ENST00000533656 IRAK4Q9NWZ3 460 aa20.83■□□□□ 0.93
VPS51-212ENST00000533656 TRPS1Q9UHF7 1281 aa20.83■□□□□ 0.93
VPS51-212ENST00000533656 SRPK3Q9UPE1 567 aa20.83■□□□□ 0.93
VPS51-212ENST00000533656 TSC22D4Q9Y3Q8 395 aa20.83■□□□□ 0.93
VPS51-212ENST00000533656 PCM1Q15154 2024 aa20.82■□□□□ 0.92
VPS51-212ENST00000533656 CDRT15L2A8MXV6 281 aa20.82■□□□□ 0.92
VPS51-212ENST00000533656 H0YIV9 168 aa20.82■□□□□ 0.92
VPS51-212ENST00000533656 ZSCAN9O15535 394 aaPredicted RBP20.82■□□□□ 0.92
VPS51-212ENST00000533656 SNUPNO95149 360 aaKnown RBP20.82■□□□□ 0.92
VPS51-212ENST00000533656 SLC35G6P0C7Q6 338 aa20.82■□□□□ 0.92
VPS51-212ENST00000533656 CD22P20273 847 aa20.82■□□□□ 0.92
VPS51-212ENST00000533656 ARSFP54793 590 aa20.82■□□□□ 0.92
VPS51-212ENST00000533656 VSX2P58304 361 aaPredicted RBP20.82■□□□□ 0.92
VPS51-212ENST00000533656 PPP2R2AP63151 447 aa20.82■□□□□ 0.92
VPS51-212ENST00000533656 PWP1Q13610 501 aa20.82■□□□□ 0.92
VPS51-212ENST00000533656 COL28A1Q2UY09 1125 aa20.82■□□□□ 0.92
VPS51-212ENST00000533656 GARNL3Q5VVW2 1013 aa20.82■□□□□ 0.92
VPS51-212ENST00000533656 GPRIN3Q6ZVF9 776 aa20.82■□□□□ 0.92
VPS51-212ENST00000533656 ASPGQ86U10 573 aa20.82■□□□□ 0.92
VPS51-212ENST00000533656 MYLK4Q86YV6 388 aaPredicted RBP20.82■□□□□ 0.92
VPS51-212ENST00000533656 CSNK1A1LQ8N752 337 aa20.82■□□□□ 0.92
VPS51-212ENST00000533656 ZNF740Q8NDX6 193 aa20.82■□□□□ 0.92
VPS51-212ENST00000533656 PPP1R14CQ8TAE6 165 aa20.82■□□□□ 0.92
VPS51-212ENST00000533656 RHBGQ9H310 441 aa20.82■□□□□ 0.92
VPS51-212ENST00000533656 DKK4Q9UBT3 224 aa20.82■□□□□ 0.92
VPS51-212ENST00000533656 B3GALT1Q9Y5Z6 326 aa20.82■□□□□ 0.92
VPS51-212ENST00000533656 ANKDD1BA6NHY2 528 aa20.81■□□□□ 0.92
VPS51-212ENST00000533656 C9orf172C9J069 976 aa20.81■□□□□ 0.92
VPS51-212ENST00000533656 HCRTR1O43613 425 aa20.81■□□□□ 0.92
VPS51-212ENST00000533656 LCMT2O60294 686 aaKnown RBP20.81■□□□□ 0.92
VPS51-212ENST00000533656 CPNE3O75131 537 aaKnown RBP20.81■□□□□ 0.92
VPS51-212ENST00000533656 SCRG1O75711 98 aa20.81■□□□□ 0.92
VPS51-212ENST00000533656 ESRRBO95718 433 aa20.81■□□□□ 0.92
VPS51-212ENST00000533656 SERPINE1P05121 402 aa20.81■□□□□ 0.92
VPS51-212ENST00000533656 ENO1P06733 434 aaKnown RBP20.81■□□□□ 0.92
VPS51-212ENST00000533656 GRK2P25098 689 aa20.81■□□□□ 0.92
VPS51-212ENST00000533656 PHEXP78562 749 aa20.81■□□□□ 0.92
VPS51-212ENST00000533656 RGS1Q08116 209 aa20.81■□□□□ 0.92
VPS51-212ENST00000533656 PRTGQ2VWP7 1150 aa20.81■□□□□ 0.92
VPS51-212ENST00000533656 FAM214AQ32MH5 1076 aa20.81■□□□□ 0.92
VPS51-212ENST00000533656 WASHC2DQ5SRD0 308 aa20.81■□□□□ 0.92
VPS51-212ENST00000533656 RPS27LQ71UM5 84 aaKnown RBP20.81■□□□□ 0.92
VPS51-212ENST00000533656 VN1R4Q7Z5H5 301 aa20.81■□□□□ 0.92
VPS51-212ENST00000533656 TMEM126BQ8IUX1 230 aa20.81■□□□□ 0.92
VPS51-212ENST00000533656 TRIM42Q8IWZ5 723 aa20.81■□□□□ 0.92
VPS51-212ENST00000533656 OR4F6Q8NGB9 312 aa20.81■□□□□ 0.92
VPS51-212ENST00000533656 OR6Y1Q8NGX8 325 aa20.81■□□□□ 0.92
VPS51-212ENST00000533656 RAB3IL1Q8TBN0 382 aa20.81■□□□□ 0.92
VPS51-212ENST00000533656 SLC13A3Q8WWT9 602 aa20.81■□□□□ 0.92
VPS51-212ENST00000533656 TM4SF19Q96DZ7 209 aa20.81■□□□□ 0.92
VPS51-212ENST00000533656 ZNF578Q96N58 590 aaPredicted RBP20.81■□□□□ 0.92
VPS51-212ENST00000533656 CTRCQ99895 268 aa20.81■□□□□ 0.92
VPS51-212ENST00000533656 PAIP2Q9BPZ3 127 aaKnown RBP20.81■□□□□ 0.92
VPS51-212ENST00000533656 SLC29A3Q9BZD2 475 aa20.81■□□□□ 0.92
VPS51-212ENST00000533656 EML4Q9HC35 981 aaKnown RBP20.81■□□□□ 0.92
VPS51-212ENST00000533656 ASCL3Q9NQ33 180 aa20.81■□□□□ 0.92
VPS51-212ENST00000533656 ACSL6Q9UKU0 697 aa20.81■□□□□ 0.92
VPS51-212ENST00000533656 AK5Q9Y6K8 562 aa20.81■□□□□ 0.92
VPS51-212ENST00000533656 SNRNP200O75643 2136 aaKnown RBP20.8■□□□□ 0.92
VPS51-212ENST00000533656 LOC105369274A0A096LPK9 316 aa20.8■□□□□ 0.92
VPS51-212ENST00000533656 LOC102723532A0A0G2JNH3 316 aa20.8■□□□□ 0.92
VPS51-212ENST00000533656 PMS2P1A4D2B8 440 aa20.8■□□□□ 0.92
VPS51-212ENST00000533656 CLEC3AO75596 197 aa20.8■□□□□ 0.92
VPS51-212ENST00000533656 EIF2S1P05198 315 aaKnown RBP20.8■□□□□ 0.92
VPS51-212ENST00000533656 NEFHP12036 1026 aa20.8■□□□□ 0.92
VPS51-212ENST00000533656 WDR4P57081 412 aaKnown RBP20.8■□□□□ 0.92
VPS51-212ENST00000533656 RCN2Q14257 317 aa20.8■□□□□ 0.92
VPS51-212ENST00000533656 PWWP2BQ6NUJ5 590 aa20.8■□□□□ 0.92
VPS51-212ENST00000533656 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.8■□□□□ 0.92
VPS51-212ENST00000533656 OR4N4Q8N0Y3 316 aa20.8■□□□□ 0.92
VPS51-212ENST00000533656 ANKRD53Q8N9V6 530 aa20.8■□□□□ 0.92
VPS51-212ENST00000533656 OR7G3Q8NG95 312 aa20.8■□□□□ 0.92
VPS51-212ENST00000533656 NT5CQ8TCD5 201 aa20.8■□□□□ 0.92
VPS51-212ENST00000533656 AGAP11Q8TF27 550 aa20.8■□□□□ 0.92
VPS51-212ENST00000533656 NDC1Q9BTX1 674 aa20.8■□□□□ 0.92
VPS51-212ENST00000533656 SLC7A5P2Q9GIP4 190 aa20.8■□□□□ 0.92
VPS51-212ENST00000533656 SPRTNQ9H040 489 aaPredicted RBP20.8■□□□□ 0.92
VPS51-212ENST00000533656 RNF11Q9Y3C5 154 aa20.8■□□□□ 0.92
VPS51-212ENST00000533656 URADA6NGE7 173 aa20.79■□□□□ 0.92
VPS51-212ENST00000533656 TMEM114B3SHH9 223 aa20.79■□□□□ 0.92
VPS51-212ENST00000533656 NDUFS4O43181 175 aa20.79■□□□□ 0.92
VPS51-212ENST00000533656 BRINP1O60477 761 aa20.79■□□□□ 0.92
VPS51-212ENST00000533656 SERPINA6P08185 405 aa20.79■□□□□ 0.92
VPS51-212ENST00000533656 NR1D1P20393 614 aa20.79■□□□□ 0.92
VPS51-212ENST00000533656 PIK3CBP42338 1070 aa20.79■□□□□ 0.92
VPS51-212ENST00000533656 ZNF33BQ06732 778 aa20.79■□□□□ 0.92
VPS51-212ENST00000533656 MAP7Q14244 749 aa20.79■□□□□ 0.92
VPS51-212ENST00000533656 CHI3L2Q15782 390 aa20.79■□□□□ 0.92
VPS51-212ENST00000533656 NDUFA9Q16795 377 aa20.79■□□□□ 0.92
VPS51-212ENST00000533656 MUM1Q2TAK8 710 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms