RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 FAM153BP0C7A2 387 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 CCDC166P0CW27 439 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 EDN3P14138 238 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 PRF1P14222 555 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 NCF1P14598 390 aaPredicted RBP8.3□□□□□ -1.08
COPB1-210ENST00000533533 ALAS2P22557 587 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 MMP11P24347 488 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 IMPA1P29218 277 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 MSH2P43246 934 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 TSFMP43897 325 aaKnown RBP8.3□□□□□ -1.08
COPB1-210ENST00000533533 RAB10P61026 200 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 NAE1Q13564 534 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 CSHL1Q14406 222 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 TSNQ15631 228 aaKnown RBP8.3□□□□□ -1.08
COPB1-210ENST00000533533 ZRSR2Q15696 482 aaKnown RBP8.3□□□□□ -1.08
COPB1-210ENST00000533533 PHKG1Q16816 387 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 FAM153CQ494X1 144 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 AGAP7PQ5VUJ5 663 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 PRAMEF13Q5VWM6 474 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 AGTRAPQ6RW13 159 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 IGFL2Q6UWQ7 119 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 TAOK1Q7L7X3 1001 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 CMC1Q7Z7K0 106 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 TBC1D1Q86TI0 1168 aaPredicted RBP8.3□□□□□ -1.08
COPB1-210ENST00000533533 RELL1Q8IUW5 271 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 FBXO15Q8NCQ5 510 aaPredicted RBP8.3□□□□□ -1.08
COPB1-210ENST00000533533 OR2L3Q8NG85 312 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 DNAJB14Q8TBM8 379 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 GRHL3Q8TE85 626 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 ANKRD49Q8WVL7 239 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 FAR1Q8WVX9 515 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 DLG3Q92796 817 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 FKBP10Q96AY3 582 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 AGAP4Q96P64 663 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 DPH7Q9BTV6 452 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 ACSS3Q9H6R3 686 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 POPDC3Q9HBV1 291 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 CCDC177Q9NQR7 707 aaPredicted RBP8.3□□□□□ -1.08
COPB1-210ENST00000533533 EURLQ9NYK6 297 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 STOX2Q9P2F5 926 aaPredicted RBP8.3□□□□□ -1.08
COPB1-210ENST00000533533 IKZF3Q9UKT9 509 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 PLCL2Q9UPR0 1127 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 OSGIN2Q9Y236 505 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 A0A0J9YVX5 310 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 A0A1B0GX78 115 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 A0A1W2PPV9 198 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 ARHGAP10A1A4S6 786 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 E7ENX8 843 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 SOCS6O14544 535 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 ZG16O60844 167 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 ALOX12BO75342 701 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 ONECUT2O95948 504 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 ALBP02768 609 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 S100BP04271 92 aaPredicted RBP8.29□□□□□ -1.08
COPB1-210ENST00000533533 EIF2S1P05198 315 aaKnown RBP8.29□□□□□ -1.08
COPB1-210ENST00000533533 ANXA5P08758 320 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 ENO2P09104 434 aaPredicted RBP8.29□□□□□ -1.08
COPB1-210ENST00000533533 POU3F2P20265 443 aaPredicted RBP8.29□□□□□ -1.08
COPB1-210ENST00000533533 ITGAXP20702 1163 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 CRABP2P29373 138 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 GMPRP36959 345 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 GCGRP47871 477 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 AP1S2P56377 157 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 TBPL1P62380 186 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 YBX1P67809 324 aaKnown RBP8.29□□□□□ -1.08
COPB1-210ENST00000533533 TAP2Q03519 686 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 CDC16Q13042 620 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 ZNF169Q14929 603 aaPredicted RBP8.29□□□□□ -1.08
COPB1-210ENST00000533533 TLR1Q15399 786 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 ZC3H12BQ5HYM0 836 aaKnown RBP8.29□□□□□ -1.08
COPB1-210ENST00000533533 IRAK1BP1Q5VVH5 260 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 ICE2Q659A1 982 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 B3GNTL1Q67FW5 361 aaPredicted RBP8.29□□□□□ -1.08
COPB1-210ENST00000533533 SP5Q6BEB4 398 aaPredicted RBP8.29□□□□□ -1.08
COPB1-210ENST00000533533 FCRL6Q6DN72 434 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 CAPN13Q6MZZ7 669 aaPredicted RBP8.29□□□□□ -1.08
COPB1-210ENST00000533533 KIRREL2Q6UWL6 708 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 TTLL10Q6ZVT0 673 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 TRMT10CQ7L0Y3 403 aaKnown RBP8.29□□□□□ -1.08
COPB1-210ENST00000533533 OVCH1Q7RTY7 1134 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 ADAMTSL2Q86TH1 951 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 MCATQ8IVS2 390 aaKnown RBP8.29□□□□□ -1.08
COPB1-210ENST00000533533 OR2A1Q8NGT9 310 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 HMGCLL1Q8TB92 370 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 UBLCP1Q8WVY7 318 aaPredicted RBP8.29□□□□□ -1.08
COPB1-210ENST00000533533 ATL1Q8WXF7 558 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 PYCR2Q96C36 320 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 MOCOSQ96EN8 888 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 PDLIM5Q96HC4 596 aaKnown RBP8.29□□□□□ -1.08
COPB1-210ENST00000533533 CNDP1Q96KN2 507 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 PAFAH2Q99487 392 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 SPSB2Q99619 263 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 SELENOSQ9BQE4 189 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 MCMBPQ9BTE3 642 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 VPS11Q9H270 941 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 SLC26A1Q9H2B4 701 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 WDR54Q9H977 334 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 PRM3Q9NNZ6 103 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 RNF112Q9ULX5 631 aa8.29□□□□□ -1.08
COPB1-210ENST00000533533 HS3ST3B1Q9Y662 390 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms