RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 VPS29Q9UBQ0 182 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 NT5C1B-RDH14C9J2C7 533 aa16.03■□□□□ 0.16
CTSB-228ENST00000533455 TLL1O43897 1013 aa16.03■□□□□ 0.16
CTSB-228ENST00000533455 MED26O95402 600 aa16.03■□□□□ 0.16
CTSB-228ENST00000533455 GALTP07902 379 aa16.03■□□□□ 0.16
CTSB-228ENST00000533455 ITPKAP23677 461 aa16.03■□□□□ 0.16
CTSB-228ENST00000533455 CCND3P30281 292 aaPredicted RBP16.03■□□□□ 0.16
CTSB-228ENST00000533455 UGT2B15P54855 530 aa16.03■□□□□ 0.16
CTSB-228ENST00000533455 PFN3P60673 137 aa16.03■□□□□ 0.16
CTSB-228ENST00000533455 OLR1P78380 273 aa16.03■□□□□ 0.16
CTSB-228ENST00000533455 NDUFA5Q16718 116 aa16.03■□□□□ 0.16
CTSB-228ENST00000533455 ATP13A5Q4VNC0 1218 aa16.03■□□□□ 0.16
CTSB-228ENST00000533455 DESI1Q6ICB0 168 aa16.03■□□□□ 0.16
CTSB-228ENST00000533455 TPRG1Q6ZUI0 275 aa16.03■□□□□ 0.16
CTSB-228ENST00000533455 RASGRP3Q8IV61 690 aa16.03■□□□□ 0.16
CTSB-228ENST00000533455 SLC5A8Q8N695 610 aa16.03■□□□□ 0.16
CTSB-228ENST00000533455 P2RY13Q9BPV8 354 aa16.03■□□□□ 0.16
CTSB-228ENST00000533455 RAD18Q9NS91 495 aa16.03■□□□□ 0.16
CTSB-228ENST00000533455 TMEM184CQ9NVA4 438 aa16.03■□□□□ 0.16
CTSB-228ENST00000533455 NDUFAF4Q9P032 175 aa16.03■□□□□ 0.16
CTSB-228ENST00000533455 MAPRE3Q9UPY8 281 aa16.03■□□□□ 0.16
CTSB-228ENST00000533455 BTBD3Q9Y2F9 522 aa16.03■□□□□ 0.16
CTSB-228ENST00000533455 PCDHB7Q9Y5E2 793 aa16.03■□□□□ 0.16
CTSB-228ENST00000533455 KLK4Q9Y5K2 254 aa16.03■□□□□ 0.16
CTSB-228ENST00000533455 GCM2O75603 506 aaPredicted RBP16.02■□□□□ 0.16
CTSB-228ENST00000533455 IGSF6O95976 241 aa16.02■□□□□ 0.16
CTSB-228ENST00000533455 HSD3B1P14060 373 aa16.02■□□□□ 0.16
CTSB-228ENST00000533455 CD22P20273 847 aa16.02■□□□□ 0.16
CTSB-228ENST00000533455 HSD3B2P26439 372 aa16.02■□□□□ 0.16
CTSB-228ENST00000533455 GTF2E2P29084 291 aaKnown RBP16.02■□□□□ 0.16
CTSB-228ENST00000533455 SERPINA4P29622 427 aa16.02■□□□□ 0.16
CTSB-228ENST00000533455 SELENOWP63302 87 aa16.02■□□□□ 0.16
CTSB-228ENST00000533455 HSPA14Q0VDF9 509 aa16.02■□□□□ 0.16
CTSB-228ENST00000533455 PLEKHS1Q5SXH7 462 aa16.02■□□□□ 0.16
CTSB-228ENST00000533455 C10orf62Q5T681 223 aaPredicted RBP16.02■□□□□ 0.16
CTSB-228ENST00000533455 ZNF367Q7RTV3 350 aa16.02■□□□□ 0.16
CTSB-228ENST00000533455 VRK3Q8IV63 474 aa16.02■□□□□ 0.16
CTSB-228ENST00000533455 C11orf65Q8NCR3 313 aa16.02■□□□□ 0.16
CTSB-228ENST00000533455 C9orf43Q8TAL5 461 aaPredicted RBP16.02■□□□□ 0.16
CTSB-228ENST00000533455 TRMT2BQ96GJ1 504 aaKnown RBP16.02■□□□□ 0.16
CTSB-228ENST00000533455 CLSTN3Q9BQT9 956 aa16.02■□□□□ 0.16
CTSB-228ENST00000533455 OR51E2Q9H255 320 aa16.02■□□□□ 0.16
CTSB-228ENST00000533455 EHD1Q9H4M9 534 aa16.02■□□□□ 0.16
CTSB-228ENST00000533455 NMRK2Q9NPI5 230 aa16.02■□□□□ 0.16
CTSB-228ENST00000533455 MKLN1Q9UL63 735 aa16.02■□□□□ 0.16
CTSB-228ENST00000533455 ZNF451Q9Y4E5 1061 aa16.02■□□□□ 0.16
CTSB-228ENST00000533455 A8MX80 341 aa16.02■□□□□ 0.15
CTSB-228ENST00000533455 PLK4O00444 970 aa16.02■□□□□ 0.15
CTSB-228ENST00000533455 GREM1O60565 184 aa16.02■□□□□ 0.15
CTSB-228ENST00000533455 PTHP01270 115 aa16.02■□□□□ 0.15
CTSB-228ENST00000533455 STSP08842 583 aa16.02■□□□□ 0.15
CTSB-228ENST00000533455 ASMTP46597 345 aa16.02■□□□□ 0.15
CTSB-228ENST00000533455 RGS6P49758 472 aa16.02■□□□□ 0.15
CTSB-228ENST00000533455 SMAD3P84022 425 aaKnown RBP16.02■□□□□ 0.15
CTSB-228ENST00000533455 IRF8Q02556 426 aa16.02■□□□□ 0.15
CTSB-228ENST00000533455 ACSM2AQ08AH3 577 aa16.02■□□□□ 0.15
CTSB-228ENST00000533455 PLD1Q13393 1074 aa16.02■□□□□ 0.15
CTSB-228ENST00000533455 GAB1Q13480 694 aa16.02■□□□□ 0.15
CTSB-228ENST00000533455 ARMCX4Q5H9R4 360 aa16.02■□□□□ 0.15
CTSB-228ENST00000533455 ANXA8L1Q5VT79 327 aa16.02■□□□□ 0.15
CTSB-228ENST00000533455 ACSM2BQ68CK6 577 aa16.02■□□□□ 0.15
CTSB-228ENST00000533455 ZNF605Q86T29 641 aa16.02■□□□□ 0.15
CTSB-228ENST00000533455 NPAS3Q8IXF0 933 aa16.02■□□□□ 0.15
CTSB-228ENST00000533455 GPR83Q9NYM4 423 aa16.02■□□□□ 0.15
CTSB-228ENST00000533455 RBMX2Q9Y388 322 aaKnown RBP16.02■□□□□ 0.15
CTSB-228ENST00000533455 PCDHGB6Q9Y5F9 930 aa16.02■□□□□ 0.15
CTSB-228ENST00000533455 PNMA8CA0A1B0GUJ8 204 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 ZNF821O75541 412 aaPredicted RBP16.01■□□□□ 0.15
CTSB-228ENST00000533455 RPL17P18621 184 aaKnown RBP16.01■□□□□ 0.15
CTSB-228ENST00000533455 OR1D2P34982 312 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 DEFA1P59665 94 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 DEFA3P59666 94 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 KCNC3Q14003 757 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 ELOAQ14241 798 aaKnown RBP16.01■□□□□ 0.15
CTSB-228ENST00000533455 CPTPQ5TA50 214 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 LRRC66Q68CR7 880 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 C19orf48Q6RUI8 117 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 Q6ZNB5 142 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 METTL3Q86U44 580 aaKnown RBP16.01■□□□□ 0.15
CTSB-228ENST00000533455 FAM217AQ8IXS0 508 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 SYTL1Q8IYJ3 562 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 STX19Q8N4C7 294 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 SKA2Q8WVK7 121 aaPredicted RBP16.01■□□□□ 0.15
CTSB-228ENST00000533455 VOPP1Q96AW1 172 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 YIPF2Q9BWQ6 316 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 SIAEQ9HAT2 523 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 AMBNQ9NP70 447 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 PRDM8Q9NQV8 689 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 THSD1Q9NS62 852 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 QPCTLQ9NXS2 382 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 VPS4AQ9UN37 437 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 PPIL1Q9Y3C6 166 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 BACE2Q9Y5Z0 518 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 LOC100506127A0A0U1RQW1 187 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 GABRR3A8MPY1 467 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 UPK3BL1B0FP48 263 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 UPK3BL2E5RIL1 263 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 ALOX12P18054 663 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 FLT3LGP49771 235 aa16.01■□□□□ 0.15
CTSB-228ENST00000533455 NUDT6P53370 316 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms