RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 SCYL1Q96KG9 808 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 UBXN10Q96LJ8 280 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 MAGEB10Q96LZ2 347 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 TSNARE1Q96NA8 513 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 GPR78Q96P69 363 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 FAM111AQ96PZ2 611 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 SLC30A3Q99726 388 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 C1GALT1Q9NS00 363 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 NDOR1Q9UHB4 597 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 TRMT6Q9UJA5 497 aaKnown RBP10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 EMCNQ9ULC0 261 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 C19orf84I3L1E1 186 aa10.82□□□□□ -0.68
TRAPPC4-213ENST00000533149 MASP2O00187 686 aa10.82□□□□□ -0.68
TRAPPC4-213ENST00000533149 ZNF749O43361 778 aa10.82□□□□□ -0.68
TRAPPC4-213ENST00000533149 SGTAO43765 313 aa10.82□□□□□ -0.68
TRAPPC4-213ENST00000533149 PLIN3O60664 434 aa10.82□□□□□ -0.68
TRAPPC4-213ENST00000533149 CLDN14O95500 239 aa10.82□□□□□ -0.68
TRAPPC4-213ENST00000533149 PROCP04070 461 aa10.82□□□□□ -0.68
TRAPPC4-213ENST00000533149 LTA4HP09960 611 aaKnown RBP10.82□□□□□ -0.68
TRAPPC4-213ENST00000533149 CDH3P22223 829 aa10.82□□□□□ -0.68
TRAPPC4-213ENST00000533149 ETV4P43268 484 aa10.82□□□□□ -0.68
TRAPPC4-213ENST00000533149 CLCN7P51798 805 aa10.82□□□□□ -0.68
TRAPPC4-213ENST00000533149 KPNA2P52292 529 aaKnown RBP10.82□□□□□ -0.68
TRAPPC4-213ENST00000533149 RBPJQ06330 500 aa10.82□□□□□ -0.68
TRAPPC4-213ENST00000533149 PRKAA1Q13131 559 aa10.82□□□□□ -0.68
TRAPPC4-213ENST00000533149 TMEM220Q6QAJ8 160 aa10.82□□□□□ -0.68
TRAPPC4-213ENST00000533149 TAX1BP1Q86VP1 789 aa10.82□□□□□ -0.68
TRAPPC4-213ENST00000533149 LCA5Q86VQ0 697 aa10.82□□□□□ -0.68
TRAPPC4-213ENST00000533149 TRAPPC5Q8IUR0 188 aa10.82□□□□□ -0.68
TRAPPC4-213ENST00000533149 GPR135Q8IZ08 494 aa10.82□□□□□ -0.68
TRAPPC4-213ENST00000533149 NKAPQ8N5F7 415 aaKnown RBP10.82□□□□□ -0.68
TRAPPC4-213ENST00000533149 CHDHQ8NE62 594 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC4-213ENST00000533149 GIMAP7Q8NHV1 300 aa10.82□□□□□ -0.68
TRAPPC4-213ENST00000533149 CD200R1Q8TD46 325 aa10.82□□□□□ -0.68
TRAPPC4-213ENST00000533149 MS4A3Q96HJ5 214 aa10.82□□□□□ -0.68
TRAPPC4-213ENST00000533149 CAPS2Q9BXY5 557 aa10.82□□□□□ -0.68
TRAPPC4-213ENST00000533149 NMRAL1Q9HBL8 299 aa10.82□□□□□ -0.68
TRAPPC4-213ENST00000533149 ANKHD1Q8IWZ3 2542 aaKnown RBP10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 WDR91A4D1P6 747 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 OR6C74A6NCV1 312 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 F8W8V4 182 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 MATN2O00339 956 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 UNC5CO95185 931 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 DHRS4L1P0CG22 281 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 ESRRAP11474 423 aaPredicted RBP10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 CCR7P32248 378 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 KIR3DL1P43629 444 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 CTSCP53634 463 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 IL2P60568 153 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 DCDP81605 110 aaKnown RBP10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 DMPKQ09013 629 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 Q0VFX4 171 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 GTF2H3Q13889 308 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 FAM83EQ2M2I3 478 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 TSNAXIP1Q2TAA8 658 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 CCDC153Q494R4 210 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 C11orf96Q7Z7L8 435 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 AMZ2Q86W34 360 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 CCDC63Q8NA47 563 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 OR1N1Q8NGS0 311 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 EEF1AKMT1Q8WVE0 214 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 DYDC1Q8WWB3 177 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 CKAP2Q8WWK9 683 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 NANOS1Q8WY41 292 aaKnown RBP10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 PANX3Q96QZ0 392 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 LMF1Q96S06 567 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 IMP3Q9NV31 184 aaKnown RBP10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 IFT80Q9P2H3 777 aaPredicted RBP10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 KLHL42Q9P2K6 505 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 FBXL4Q9UKA2 621 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 AP1M2Q9Y6Q5 423 aa10.81□□□□□ -0.68
TRAPPC4-213ENST00000533149 TMEM200CA6NKL6 621 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 OR2AG2A6NM03 316 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 QSOX1O00391 747 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 APOA4P06727 396 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 BPGMP07738 259 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 RBP1P09455 135 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 MTHFD1P11586 935 aaKnown RBP10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 CPA3P15088 417 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 CD1DP15813 335 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 ZNF37AP17032 561 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 AOAHP28039 575 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 SERPINB4P48594 390 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 ATP6V0D1P61421 351 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 GNGT1P63211 74 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 ACAP2Q15057 778 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 TUBB8Q3ZCM7 444 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 ACSBG2Q5FVE4 666 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 LRRC8EQ6NSJ5 796 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 KLC3Q6P597 504 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 ISLR2Q6UXK2 745 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 NAPRTQ6XQN6 538 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 OTOAQ7RTW8 1153 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 ISCA2Q86U28 154 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 TGIF2LYQ8IUE0 185 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 CPNE9Q8IYJ1 553 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 TMEM151AQ8N4L1 468 aa10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 BEND7Q8N7W2 519 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC4-213ENST00000533149 PROKR1Q8TCW9 393 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms