RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 FRG2Q64ET8 278 aa17.75■□□□□ 0.43
SMPD1-208ENST00000533123 ADNP2Q6IQ32 1131 aa17.75■□□□□ 0.43
SMPD1-208ENST00000533123 SPDL1Q96EA4 605 aa17.75■□□□□ 0.43
SMPD1-208ENST00000533123 FRG2BQ96QU4 278 aa17.75■□□□□ 0.43
SMPD1-208ENST00000533123 PCBD2Q9H0N5 130 aa17.75■□□□□ 0.43
SMPD1-208ENST00000533123 HRASLS2Q9NWW9 162 aa17.75■□□□□ 0.43
SMPD1-208ENST00000533123 GSAPA4D1B5 854 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 RHPN2P1A8MT19 583 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 BBIP1A8MTZ0 92 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 PCDHGA12O60330 932 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 PSMG1O95456 288 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 CDH1P12830 882 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 KCNK10P57789 538 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 RCN1Q15293 331 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 TIGD2Q4W5G0 525 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 SLCO4C1Q6ZQN7 724 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 ZNF438Q7Z4V0 828 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 RSC1A1Q92681 617 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 STMN2Q93045 179 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 APOLD1Q96LR9 279 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.74■□□□□ 0.43
SMPD1-208ENST00000533123 CUEDC1Q9NWM3 386 aaPredicted RBP17.74■□□□□ 0.43
SMPD1-208ENST00000533123 ADA2Q9NZK5 511 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 ZIM2Q9NZV7 527 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 HEATR5BQ9P2D3 2071 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 RP1P56715 2156 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 ANKRD28O15084 1053 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 UGDHO60701 494 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 ZNF806P0C7X5 589 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 POLR2JP52435 117 aaKnown RBP17.74■□□□□ 0.43
SMPD1-208ENST00000533123 IRX1P78414 480 aaPredicted RBP17.74■□□□□ 0.43
SMPD1-208ENST00000533123 MEF2AQ02078 507 aaPredicted RBP17.74■□□□□ 0.43
SMPD1-208ENST00000533123 PRDX1Q06830 199 aaKnown RBP17.74■□□□□ 0.43
SMPD1-208ENST00000533123 SPEM2Q0P670 501 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 CCNIQ14094 377 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 LIPJQ5W064 366 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 C17orf64Q86WR6 236 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 ENDOVQ8N8Q3 282 aaKnown RBP17.74■□□□□ 0.43
SMPD1-208ENST00000533123 FAM156AQ8NDB6 213 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 HIPK4Q8NE63 616 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 SLC24A3Q9HC58 644 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 C1orf109Q9NX04 203 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 NDUFAF1Q9Y375 327 aa17.74■□□□□ 0.43
SMPD1-208ENST00000533123 H7BY64 318 aa17.73■□□□□ 0.43
SMPD1-208ENST00000533123 NUDT21O43809 227 aaKnown RBP17.73■□□□□ 0.43
SMPD1-208ENST00000533123 UBXN7O94888 489 aa17.73■□□□□ 0.43
SMPD1-208ENST00000533123 GLB1P16278 677 aa17.73■□□□□ 0.43
SMPD1-208ENST00000533123 ALDH4A1P30038 563 aa17.73■□□□□ 0.43
SMPD1-208ENST00000533123 DDX39BQ13838 428 aaKnown RBP17.73■□□□□ 0.43
SMPD1-208ENST00000533123 C8orf82Q6P1X6 216 aaPredicted RBP17.73■□□□□ 0.43
SMPD1-208ENST00000533123 ZFAND4Q86XD8 727 aa17.73■□□□□ 0.43
SMPD1-208ENST00000533123 LIX1Q8N485 282 aa17.73■□□□□ 0.43
SMPD1-208ENST00000533123 PRAP1Q96NZ9 151 aa17.73■□□□□ 0.43
SMPD1-208ENST00000533123 UCK1Q9HA47 277 aa17.73■□□□□ 0.43
SMPD1-208ENST00000533123 RXFP3Q9NSD7 469 aa17.73■□□□□ 0.43
SMPD1-208ENST00000533123 PADI4Q9UM07 663 aa17.73■□□□□ 0.43
SMPD1-208ENST00000533123 FAM221BA6H8Z2 402 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 AMD1P17707 334 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 TCN1P20061 433 aaPredicted RBP17.72■□□□□ 0.43
SMPD1-208ENST00000533123 PPP1CAP62136 330 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 BLMHQ13867 455 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 KIAA0040Q15053 153 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 GRHL2Q6ISB3 625 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 NXPE4Q6UWF7 544 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 PCYOX1LQ8NBM8 494 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 OR2L3Q8NG85 312 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 WDR20Q8TBZ3 569 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 OR2A14Q96R47 310 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 MTERF1Q99551 399 aaKnown RBP17.72■□□□□ 0.43
SMPD1-208ENST00000533123 SERPINI1Q99574 410 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 DCLRE1BQ9H816 532 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 ACTR10Q9NZ32 417 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 CROTQ9UKG9 612 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 EIF3LQ9Y262 564 aaKnown RBP17.72■□□□□ 0.43
SMPD1-208ENST00000533123 KLHL20Q9Y2M5 609 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 IGKV1-8A0A0C4DH67 115 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 A0A1W2PP18 115 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 FAM234BA2RU67 622 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 OR5K3A6NET4 321 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 LILRA5A6NI73 299 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 FXYD1O00168 92 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 C1GALT1C1LP0DN25 315 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 PPM1FP49593 454 aaPredicted RBP17.72■□□□□ 0.43
SMPD1-208ENST00000533123 PCDH1Q08174 1060 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 CAPRIN1Q14444 709 aaKnown RBP17.72■□□□□ 0.43
SMPD1-208ENST00000533123 KIR2DS3Q14952 304 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 ATG9BQ674R7 924 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 OOSP2Q86WS3 158 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 CLHC1Q8NHS4 586 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 FLVCR1-AS1Q8TAF5 88 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 SLC22A18Q96BI1 424 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 APIPQ96GX9 242 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 ANKRD27Q96NW4 1050 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 TWSG1Q9GZX9 223 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 SPNS1Q9H2V7 528 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 MRPS30Q9NP92 439 aaKnown RBP17.72■□□□□ 0.43
SMPD1-208ENST00000533123 BTBD3Q9Y2F9 522 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 DLGAP4Q9Y2H0 992 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 UNC13CQ8NB66 2214 aa17.72■□□□□ 0.43
SMPD1-208ENST00000533123 CCDC154A6NI56 674 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms