RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 AGAP4Q96P64 663 aa17.96■□□□□ 0.47
SSH3-209ENST00000532600 OR4K3Q96R72 315 aa17.96■□□□□ 0.47
SSH3-209ENST00000532600 WDR77Q9BQA1 342 aaPredicted RBP17.96■□□□□ 0.47
SSH3-209ENST00000532600 ILKAPQ9H0C8 392 aaPredicted RBP17.96■□□□□ 0.47
SSH3-209ENST00000532600 UTP6Q9NYH9 597 aaKnown RBP17.96■□□□□ 0.47
SSH3-209ENST00000532600 ZFATQ9P243 1243 aa17.96■□□□□ 0.47
SSH3-209ENST00000532600 VWA7Q9Y334 891 aa17.96■□□□□ 0.47
SSH3-209ENST00000532600 KLHL41O60662 606 aa17.95■□□□□ 0.46
SSH3-209ENST00000532600 CBX6O95503 412 aa17.95■□□□□ 0.46
SSH3-209ENST00000532600 ACSL3O95573 720 aa17.95■□□□□ 0.46
SSH3-209ENST00000532600 CDH1P12830 882 aa17.95■□□□□ 0.46
SSH3-209ENST00000532600 EEF1A2Q05639 463 aaKnown RBP17.95■□□□□ 0.46
SSH3-209ENST00000532600 EIF2S3LQ2VIR3 472 aaKnown RBP17.95■□□□□ 0.46
SSH3-209ENST00000532600 KBTBD12Q3ZCT8 623 aa17.95■□□□□ 0.46
SSH3-209ENST00000532600 FAAH2Q6GMR7 532 aa17.95■□□□□ 0.46
SSH3-209ENST00000532600 STRA8Q7Z7C7 330 aa17.95■□□□□ 0.46
SSH3-209ENST00000532600 GPATCH11Q8N954 259 aa17.95■□□□□ 0.46
SSH3-209ENST00000532600 PPP4R1Q8TF05 950 aa17.95■□□□□ 0.46
SSH3-209ENST00000532600 PYCR2Q96C36 320 aa17.95■□□□□ 0.46
SSH3-209ENST00000532600 YIPF2Q9BWQ6 316 aa17.95■□□□□ 0.46
SSH3-209ENST00000532600 FUT8Q9BYC5 575 aa17.95■□□□□ 0.46
SSH3-209ENST00000532600 TSPYL1Q9H0U9 437 aa17.95■□□□□ 0.46
SSH3-209ENST00000532600 EPB41L4BQ9H329 900 aa17.95■□□□□ 0.46
SSH3-209ENST00000532600 MKKSQ9NPJ1 570 aaPredicted RBP17.95■□□□□ 0.46
SSH3-209ENST00000532600 C14orf105Q9NVL8 296 aa17.95■□□□□ 0.46
SSH3-209ENST00000532600 NOVA2Q9UNW9 492 aaKnown RBP17.95■□□□□ 0.46
SSH3-209ENST00000532600 LOC102723996A0A087X1L8 192 aa17.94■□□□□ 0.46
SSH3-209ENST00000532600 IGHV1-45A0A0A0MS14 117 aa17.94■□□□□ 0.46
SSH3-209ENST00000532600 TXNDC9O14530 226 aa17.94■□□□□ 0.46
SSH3-209ENST00000532600 MAP2K7O14733 419 aa17.94■□□□□ 0.46
SSH3-209ENST00000532600 FAM155BO75949 473 aa17.94■□□□□ 0.46
SSH3-209ENST00000532600 BMP10O95393 424 aa17.94■□□□□ 0.46
SSH3-209ENST00000532600 HRH2P25021 359 aa17.94■□□□□ 0.46
SSH3-209ENST00000532600 SOX11P35716 441 aa17.94■□□□□ 0.46
SSH3-209ENST00000532600 IL2P60568 153 aa17.94■□□□□ 0.46
SSH3-209ENST00000532600 RPS15AP62244 130 aaKnown RBP17.94■□□□□ 0.46
SSH3-209ENST00000532600 NR6A1Q15406 480 aa17.94■□□□□ 0.46
SSH3-209ENST00000532600 FHL5Q5TD97 284 aa17.94■□□□□ 0.46
SSH3-209ENST00000532600 TMEM214Q6NUQ4 689 aaKnown RBP17.94■□□□□ 0.46
SSH3-209ENST00000532600 TMEM205Q6UW68 189 aa17.94■□□□□ 0.46
SSH3-209ENST00000532600 LCTLQ6UWM7 567 aa17.94■□□□□ 0.46
SSH3-209ENST00000532600 SBSNQ6UWP8 590 aa17.94■□□□□ 0.46
SSH3-209ENST00000532600 CEP128Q6ZU80 1094 aa17.94■□□□□ 0.46
SSH3-209ENST00000532600 NDUFAF7Q7L592 441 aa17.94■□□□□ 0.46
SSH3-209ENST00000532600 SLC26A11Q86WA9 606 aa17.94■□□□□ 0.46
SSH3-209ENST00000532600 ZC3HC1Q86WB0 502 aaKnown RBP17.94■□□□□ 0.46
SSH3-209ENST00000532600 PDSS2Q86YH6 399 aa17.94■□□□□ 0.46
SSH3-209ENST00000532600 KCT2Q8NC54 265 aa17.94■□□□□ 0.46
SSH3-209ENST00000532600 OR56A3Q8NH54 315 aa17.94■□□□□ 0.46
SSH3-209ENST00000532600 TM9SF4Q92544 642 aa17.94■□□□□ 0.46
SSH3-209ENST00000532600 ALKBH8Q96BT7 664 aaKnown RBP17.94■□□□□ 0.46
SSH3-209ENST00000532600 PCBD2Q9H0N5 130 aa17.94■□□□□ 0.46
SSH3-209ENST00000532600 MAP10Q9P2G4 905 aa17.94■□□□□ 0.46
SSH3-209ENST00000532600 SCN3AQ9NY46 2000 aa17.94■□□□□ 0.46
SSH3-209ENST00000532600 CNTRLQ7Z7A1 2325 aa17.94■□□□□ 0.46
SSH3-209ENST00000532600 ICE1Q9Y2F5 2266 aa17.93■□□□□ 0.46
SSH3-209ENST00000532600 OR2W5A6NFC9 320 aa17.93■□□□□ 0.46
SSH3-209ENST00000532600 PRPF4O43172 522 aaKnown RBP eCLIP17.93■□□□□ 0.46
SSH3-209ENST00000532600 ANXA5P08758 320 aa17.93■□□□□ 0.46
SSH3-209ENST00000532600 PRR35P0CG20 571 aa17.93■□□□□ 0.46
SSH3-209ENST00000532600 IL1RNP18510 177 aa17.93■□□□□ 0.46
SSH3-209ENST00000532600 STX2P32856 288 aa17.93■□□□□ 0.46
SSH3-209ENST00000532600 PDAP1Q13442 181 aaKnown RBP17.93■□□□□ 0.46
SSH3-209ENST00000532600 ZNF460Q14592 562 aa17.93■□□□□ 0.46
SSH3-209ENST00000532600 PCOLCEQ15113 449 aa17.93■□□□□ 0.46
SSH3-209ENST00000532600 PPP1R3AQ16821 1122 aa17.93■□□□□ 0.46
SSH3-209ENST00000532600 LINC00696Q6ZRV3 163 aa17.93■□□□□ 0.46
SSH3-209ENST00000532600 C17orf64Q86WR6 236 aa17.93■□□□□ 0.46
SSH3-209ENST00000532600 CATSPER1Q8NEC5 780 aa17.93■□□□□ 0.46
SSH3-209ENST00000532600 OR4K1Q8NGD4 311 aa17.93■□□□□ 0.46
SSH3-209ENST00000532600 GABPB2Q8TAK5 448 aaPredicted RBP17.93■□□□□ 0.46
SSH3-209ENST00000532600 UHMK1Q8TAS1 419 aaKnown RBP17.93■□□□□ 0.46
SSH3-209ENST00000532600 SPNS1Q9H2V7 528 aa17.93■□□□□ 0.46
SSH3-209ENST00000532600 ARL15Q9NXU5 204 aa17.93■□□□□ 0.46
SSH3-209ENST00000532600 NBPF19A0A087WUL8 3843 aa17.93■□□□□ 0.46
SSH3-209ENST00000532600 SPTBN1Q01082 2364 aaKnown RBP17.93■□□□□ 0.46
SSH3-209ENST00000532600 NSG1A0A0A6YYJ2 146 aa17.92■□□□□ 0.46
SSH3-209ENST00000532600 H0YIG0 161 aa17.92■□□□□ 0.46
SSH3-209ENST00000532600 SGK494L7N484 410 aa17.92■□□□□ 0.46
SSH3-209ENST00000532600 NSA2O95478 260 aaKnown RBP17.92■□□□□ 0.46
SSH3-209ENST00000532600 HEXBP07686 556 aa17.92■□□□□ 0.46
SSH3-209ENST00000532600 GP1BBP13224 206 aa17.92■□□□□ 0.46
SSH3-209ENST00000532600 VARSP26640 1264 aaKnown RBP17.92■□□□□ 0.46
SSH3-209ENST00000532600 GLRBP48167 497 aa17.92■□□□□ 0.46
SSH3-209ENST00000532600 MEF2AQ02078 507 aaPredicted RBP17.92■□□□□ 0.46
SSH3-209ENST00000532600 MFAP5Q13361 173 aa17.92■□□□□ 0.46
SSH3-209ENST00000532600 SLMAPQ14BN4 828 aa17.92■□□□□ 0.46
SSH3-209ENST00000532600 FAM45BPQ6NSW5 357 aa17.92■□□□□ 0.46
SSH3-209ENST00000532600 ISLR2Q6UXK2 745 aa17.92■□□□□ 0.46
SSH3-209ENST00000532600 CTAGE3PQ8IX95 158 aa17.92■□□□□ 0.46
SSH3-209ENST00000532600 KBTBD2Q8IY47 623 aa17.92■□□□□ 0.46
SSH3-209ENST00000532600 PPM1NQ8N819 430 aa17.92■□□□□ 0.46
SSH3-209ENST00000532600 MFSD9Q8NBP5 474 aa17.92■□□□□ 0.46
SSH3-209ENST00000532600 ZNF740Q8NDX6 193 aa17.92■□□□□ 0.46
SSH3-209ENST00000532600 ABHD11Q8NFV4 315 aa17.92■□□□□ 0.46
SSH3-209ENST00000532600 DNAJB14Q8TBM8 379 aa17.92■□□□□ 0.46
SSH3-209ENST00000532600 FAM45AQ8TCE6 357 aa17.92■□□□□ 0.46
SSH3-209ENST00000532600 BRIX1Q8TDN6 353 aaKnown RBP17.92■□□□□ 0.46
SSH3-209ENST00000532600 FBXL8Q96CD0 374 aa17.92■□□□□ 0.46
SSH3-209ENST00000532600 THAP11Q96EK4 314 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms