RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 SPPL2BQ8TCT7 592 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 DYNC2LI1Q8TCX1 351 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 TWIST2Q8WVJ9 160 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 DDX1Q92499 740 aaKnown RBP6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 CREB3L1Q96BA8 519 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 C11orf24Q96F05 449 aaPredicted RBP6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 FOPNLQ96NB1 174 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 EGFL8Q99944 293 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 ZNF670Q9BS34 389 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 SNRNP25Q9BV90 132 aaKnown RBP6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 OR51B5Q9H339 312 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 BRD9Q9H8M2 597 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 SARS2Q9NP81 518 aaKnown RBP6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 PRDM8Q9NQV8 689 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 SEC14L4Q9UDX3 406 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 MAN2B2Q9Y2E5 1009 aa6.59□□□□□ -1.35
TGFBR3-209ENST00000532540 ZNFX1Q9P2E3 1918 aaKnown RBP6.59□□□□□ -1.36
TGFBR3-209ENST00000532540 NEMP2A6NFY4 417 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 ZNF879B4DU55 563 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 DISC1C4P0D8 188 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 STX16O14662 325 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 KPNA5O15131 536 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 ZNF254O75437 659 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 PMPCBO75439 489 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 COL6A1P12109 1028 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 HLA-FP30511 346 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 SLC11A2P49281 568 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 MNX1P50219 401 aaPredicted RBP6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 GBX2P52951 348 aaPredicted RBP6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 ATP12AP54707 1039 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 MTPNP58546 118 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 RAB5BP61020 215 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 TSPAN5P62079 268 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 SLC10A2Q12908 348 aaPredicted RBP6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 SLAMF1Q13291 335 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 CTBP1Q13363 440 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 GPNMBQ14956 572 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 TEAD4Q15561 434 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 COL28A1Q2UY09 1125 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 KIAA0319Q5VV43 1072 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 LRRC66Q68CR7 880 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 SCIMPQ6UWF3 145 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 ZDHHC21Q8IVQ6 265 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 SLC44A2Q8IWA5 706 aaPredicted RBP6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 CHPFQ8IZ52 775 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 TMEM132CQ8N3T6 1108 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 ZNF675Q8TD23 568 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 TMEM74Q96NL1 305 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 KCTD15Q96SI1 283 aaPredicted RBP6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 UHRF1Q96T88 793 aaPredicted RBP6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 MNTQ99583 582 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 TSNAXQ99598 290 aaKnown RBP6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 KXD1Q9BQD3 176 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 SEMA4BQ9NPR2 832 aaPredicted RBP6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 INTS7Q9NVH2 962 aaKnown RBP6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 SLCO3A1Q9UIG8 710 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 SAMD4AQ9UPU9 718 aaKnown RBP6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 UBE2QL1A1L167 161 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 SLC38A8A6NNN8 435 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 ISM1B1AKI9 464 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 F5H5T6 163 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 CTDSP2O14595 271 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 SYN3O14994 580 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 MUSKO15146 869 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 BET1O15155 118 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 JCHAINP01591 159 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 ASGR2P07307 311 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 NR2F6P10588 404 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 OR1E1P30953 314 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 CCR1P32246 355 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 TNFSF8P32971 234 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 GPC1P35052 558 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 SEC13P55735 322 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 RPS24P62847 133 aaKnown RBP6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 ADARB1P78563 741 aaKnown RBP6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 TSTA3Q13630 321 aaPredicted RBP6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 GRIN2CQ14957 1233 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 FLYWCH1Q4VC44 716 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 C2orf27AQ580R0 203 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 GPR153Q6NV75 609 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 SHQ1Q6PI26 577 aaKnown RBP6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 PAMR1Q6UXH9 720 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 SLC39A11Q8N1S5 342 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 NIPA2Q8N8Q9 360 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 PAPD5Q8NDF8 572 aaKnown RBP6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 TANKQ92844 425 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 FBXW5Q969U6 566 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 MOCOSQ96EN8 888 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 AGAP2Q99490 1192 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 CLSTN3Q9BQT9 956 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 WACQ9BTA9 647 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 CHIAQ9BZP6 476 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 MFSD1Q9H3U5 465 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 FBRSL1Q9HCM7 1045 aaKnown RBP6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 ACOXLQ9NUZ1 547 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 MARCH5Q9NX47 278 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 OR12D3Q9UGF7 316 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 EMCNQ9ULC0 261 aa6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 AAR2Q9Y312 384 aaKnown RBP6.58□□□□□ -1.36
TGFBR3-209ENST00000532540 DERAQ9Y315 318 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms