RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 DNAJC21Q5F1R6 531 aaKnown RBP2.68□□□□□ -1.98
CD44-234ENST00000531873 ZNF324BQ6AW86 544 aaPredicted RBP2.68□□□□□ -1.98
CD44-234ENST00000531873 C9orf139Q6ZV77 190 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 TOM1L2Q6ZVM7 507 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 C5orf24Q7Z6I8 188 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 SMIM29Q86T20 159 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 PIGZQ86VD9 579 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 ERC1Q8IUD2 1116 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 ZC3H3Q8IXZ2 948 aaKnown RBP2.68□□□□□ -1.98
CD44-234ENST00000531873 RCOR2Q8IZ40 523 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 NEK11Q8NG66 645 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 EXOC6Q8TAG9 804 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 LMO3Q8TAP4 145 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 NUDCD2Q8WVJ2 157 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 PRCCQ92733 491 aaPredicted RBP2.68□□□□□ -1.98
CD44-234ENST00000531873 GGHQ92820 318 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 MRPL38Q96DV4 380 aaKnown RBP2.68□□□□□ -1.98
CD44-234ENST00000531873 ZNF560Q96MR9 790 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 IDI2Q9BXS1 227 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 PANK2Q9BZ23 570 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 C10orf88Q9H8K7 445 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 UPF2Q9HAU5 1272 aaKnown RBP2.68□□□□□ -1.98
CD44-234ENST00000531873 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.68□□□□□ -1.98
CD44-234ENST00000531873 TAAR2Q9P1P5 351 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 TRIM10Q9UDY6 481 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 ZNF510Q9Y2H8 683 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 NSG2Q9Y328 171 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 TMED7Q9Y3B3 224 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 MYH15Q9Y2K3 1946 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 IGHV4-61A0A0C4DH41 118 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 A0A1B0GUV1 79 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 SERINC4A6NH21 518 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 SRRM4A7MD48 611 aaKnown RBP2.67□□□□□ -1.98
CD44-234ENST00000531873 ZNF197O14709 1029 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 DFFBO76075 338 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 NADKO95544 446 aaPredicted RBP2.67□□□□□ -1.98
CD44-234ENST00000531873 IGHV4-59P01825 116 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 CETPP11597 493 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 KRT3P12035 628 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 RBMS1P29558 406 aaKnown RBP2.67□□□□□ -1.98
CD44-234ENST00000531873 OR1D2P34982 312 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 CAMLGP49069 296 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 TNFSF10P50591 281 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 DNA2P51530 1060 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 GPC3P51654 580 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 SLC34A1Q06495 639 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 SLC3A1Q07837 685 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 LCP2Q13094 533 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 TAF13Q15543 124 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 IZUMO4Q1ZYL8 232 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 TTC31Q49AM3 519 aaPredicted RBP2.67□□□□□ -1.98
CD44-234ENST00000531873 EPC2Q52LR7 807 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 PDLIM3Q53GG5 364 aaPredicted RBP2.67□□□□□ -1.98
CD44-234ENST00000531873 ZNF542PQ5EBM4 170 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 ARMCX4Q5H9R4 360 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 TOR1AIP1Q5JTV8 583 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 B3GLCTQ6Y288 498 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 COX8CQ7Z4L0 72 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 ADAMTSL2Q86TH1 951 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 STHQ8IWL8 128 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 ELMOD2Q8IZ81 293 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 KIRREL3Q8IZU9 778 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 PRSS35Q8N3Z0 413 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 KLHDC9Q8NEP7 349 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 OR13A1Q8NGR1 328 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 OR4C3Q8NH37 302 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 TMEM186Q96B77 213 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 ZBTB9Q96C00 473 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 LGALS12Q96DT0 336 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 NSL1Q96IY1 281 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 ZNF354BQ96LW1 612 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 DUX5Q96PT3 197 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 BTBD9Q96Q07 612 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 CDCA3Q99618 268 aaPredicted RBP2.67□□□□□ -1.98
CD44-234ENST00000531873 PKP2Q99959 881 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 NTMT1Q9BV86 223 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 KRTAP2-2Q9BYT5 123 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 MTMR12Q9C0I1 747 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 TMEM245Q9H330 911 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 RNF121Q9H920 327 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 SIX2Q9NPC8 291 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 ZFP57Q9NU63 452 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 PDRG1Q9NUG6 133 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 HPF1Q9NWY4 346 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 DONSONQ9NYP3 566 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 SPASTQ9UBP0 616 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 UBQLN2Q9UHD9 624 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 PSORS1C1Q9UIG5 152 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 PILRBQ9UKJ0 227 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 STRAPQ9Y3F4 350 aaKnown RBP2.67□□□□□ -1.98
CD44-234ENST00000531873 PCDHGB1Q9Y5G3 927 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 FER1L5A0AVI2 2057 aa2.67□□□□□ -1.98
CD44-234ENST00000531873 SNURFLB1AK76 121 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 SLC28A1O00337 649 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 MLNRO43193 412 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 TXNL1O43396 289 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 KIF5CO60282 957 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 GLRA3O75311 464 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 REC8O95072 547 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 TGFAP01135 160 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms