RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ACPTQ9BZG2 426 aa18.21■□□□□ 0.51
SMPD1-205ENST00000531303 RHBGQ9H310 441 aa18.21■□□□□ 0.51
SMPD1-205ENST00000531303 OR51B5Q9H339 312 aa18.21■□□□□ 0.51
SMPD1-205ENST00000531303 MEAF6Q9HAF1 191 aa18.21■□□□□ 0.51
SMPD1-205ENST00000531303 DMRT3Q9NQL9 472 aa18.21■□□□□ 0.51
SMPD1-205ENST00000531303 KLHL14Q9P2G3 628 aa18.21■□□□□ 0.51
SMPD1-205ENST00000531303 ZFP69BQ9UJL9 534 aa18.21■□□□□ 0.51
SMPD1-205ENST00000531303 SLC12A4Q9UP95 1085 aa18.21■□□□□ 0.51
SMPD1-205ENST00000531303 SPAARA0A1B0GVQ0 90 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 SLC28A1O00337 649 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 SAP18O00422 153 aaKnown RBP18.2■□□□□ 0.5
SMPD1-205ENST00000531303 FAM107AO95990 144 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 ALOX15P16050 662 aaPredicted RBP18.2■□□□□ 0.5
SMPD1-205ENST00000531303 AHRP35869 848 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 CLDN6P56747 220 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 SPDYAQ5MJ70 313 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 RNF44Q7L0R7 432 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 DNAJC22Q8N4W6 341 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 TTLQ8NG68 377 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 NETO1Q8TDF5 533 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 BCAS4Q8TDM0 211 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 N4BP2L2Q92802 583 aaPredicted RBP18.2■□□□□ 0.5
SMPD1-205ENST00000531303 OR52B2Q96RD2 323 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 PFDN4Q9NQP4 134 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 STARD5Q9NSY2 213 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 IRAK4Q9NWZ3 460 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 TOR4AQ9NXH8 423 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 AP1M2Q9Y6Q5 423 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 NDUFAB1O14561 156 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 NDUFS4O43181 175 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 RGS14O43566 566 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 SNX3O60493 162 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 PEX11AO75192 247 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 ETHE1O95571 254 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 CTSBP07858 339 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 PIK3CBP42338 1070 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 INHBCP55103 352 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 E2F1Q01094 437 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 ILKQ13418 452 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 NR6A1Q15406 480 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 GPR19Q15760 415 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 CLPPQ16740 277 aaPredicted RBP18.2■□□□□ 0.5
SMPD1-205ENST00000531303 GALNTL6Q49A17 601 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 ZC3H12BQ5HYM0 836 aaKnown RBP18.2■□□□□ 0.5
SMPD1-205ENST00000531303 RBM44Q6ZP01 1051 aaKnown RBP18.2■□□□□ 0.5
SMPD1-205ENST00000531303 DGLUCYQ7Z3D6 616 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 TRIM46Q7Z4K8 759 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 VN1R4Q7Z5H5 301 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 ASPGQ86U10 573 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 CARFQ8N187 725 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 CHCHD4Q8N4Q1 142 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 CREB3L4Q8TEY5 395 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 SLC13A3Q8WWT9 602 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 KLHL6Q8WZ60 621 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 RILPQ96NA2 401 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 F2RL3Q96RI0 385 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 SARGQ9BW04 601 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 ZNF768Q9H5H4 540 aaKnown RBP18.2■□□□□ 0.5
SMPD1-205ENST00000531303 AKTIPQ9H8T0 292 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 RIC8BQ9NVN3 520 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 PDP2Q9P2J9 529 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 ADGRE2Q9UHX3 823 aa18.2■□□□□ 0.5
SMPD1-205ENST00000531303 G3BP2Q9UN86 482 aaKnown RBP18.2■□□□□ 0.5
SMPD1-205ENST00000531303 SCN3AQ9NY46 2000 aa18.19■□□□□ 0.5
SMPD1-205ENST00000531303 KIF26BQ2KJY2 2108 aa18.19■□□□□ 0.5
SMPD1-205ENST00000531303 FOXE1O00358 373 aaPredicted RBP18.19■□□□□ 0.5
SMPD1-205ENST00000531303 P2RX6O15547 441 aa18.19■□□□□ 0.5
SMPD1-205ENST00000531303 NELFEP18615 380 aaKnown RBP18.19■□□□□ 0.5
SMPD1-205ENST00000531303 RELAQ04206 551 aa18.19■□□□□ 0.5
SMPD1-205ENST00000531303 CSTF3Q12996 717 aaKnown RBP18.19■□□□□ 0.5
SMPD1-205ENST00000531303 XKR7Q5GH72 579 aa18.19■□□□□ 0.5
SMPD1-205ENST00000531303 DHRS13Q6UX07 377 aa18.19■□□□□ 0.5
SMPD1-205ENST00000531303 Q6ZSR9 355 aa18.19■□□□□ 0.5
SMPD1-205ENST00000531303 ARHGAP22Q7Z5H3 698 aa18.19■□□□□ 0.5
SMPD1-205ENST00000531303 SLCO6A1Q86UG4 719 aa18.19■□□□□ 0.5
SMPD1-205ENST00000531303 SLITRK4Q8IW52 837 aa18.19■□□□□ 0.5
SMPD1-205ENST00000531303 GBP7Q8N8V2 638 aaPredicted RBP18.19■□□□□ 0.5
SMPD1-205ENST00000531303 TRPV3Q8NET8 790 aa18.19■□□□□ 0.5
SMPD1-205ENST00000531303 WDR48Q8TAF3 677 aa18.19■□□□□ 0.5
SMPD1-205ENST00000531303 C10orf82Q8WW14 230 aa18.19■□□□□ 0.5
SMPD1-205ENST00000531303 THAP11Q96EK4 314 aa18.19■□□□□ 0.5
SMPD1-205ENST00000531303 SLC41A2Q96JW4 573 aa18.19■□□□□ 0.5
SMPD1-205ENST00000531303 SIKE1Q9BRV8 207 aa18.19■□□□□ 0.5
SMPD1-205ENST00000531303 SEMA5BQ9P283 1151 aa18.19■□□□□ 0.5
SMPD1-205ENST00000531303 PLCL2Q9UPR0 1127 aa18.19■□□□□ 0.5
SMPD1-205ENST00000531303 TSC22D4Q9Y3Q8 395 aa18.19■□□□□ 0.5
SMPD1-205ENST00000531303 CNOT1A5YKK6 2376 aaKnown RBP18.19■□□□□ 0.5
SMPD1-205ENST00000531303 CEP250Q9BV73 2442 aa18.18■□□□□ 0.5
SMPD1-205ENST00000531303 TOX3O15405 576 aaPredicted RBP18.18■□□□□ 0.5
SMPD1-205ENST00000531303 CLEC3AO75596 197 aa18.18■□□□□ 0.5
SMPD1-205ENST00000531303 FOLR1P15328 257 aa18.18■□□□□ 0.5
SMPD1-205ENST00000531303 PTX3P26022 381 aaPredicted RBP18.18■□□□□ 0.5
SMPD1-205ENST00000531303 SERPINB1P30740 379 aa18.18■□□□□ 0.5
SMPD1-205ENST00000531303 INSM1Q01101 510 aaPredicted RBP18.18■□□□□ 0.5
SMPD1-205ENST00000531303 TOR1AIP1Q5JTV8 583 aa18.18■□□□□ 0.5
SMPD1-205ENST00000531303 WASHC2DQ5SRD0 308 aa18.18■□□□□ 0.5
SMPD1-205ENST00000531303 TMTC4Q5T4D3 741 aa18.18■□□□□ 0.5
SMPD1-205ENST00000531303 C10orf62Q5T681 223 aaPredicted RBP18.18■□□□□ 0.5
SMPD1-205ENST00000531303 ACAD11Q709F0 780 aa18.18■□□□□ 0.5
SMPD1-205ENST00000531303 PIGWQ7Z7B1 504 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms