RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 FCRL5Q96RD9 977 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 PLCD4Q9BRC7 762 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 BDH2Q9BUT1 245 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 RAB11FIP5Q9BXF6 653 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 DRC3Q9H069 523 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 TRIM45Q9H8W5 580 aaPredicted RBP7.7□□□□□ -1.18
CD44-232ENST00000531118 KLHL8Q9P2G9 620 aaPredicted RBP7.7□□□□□ -1.18
CD44-232ENST00000531118 B4GALT7Q9UBV7 327 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 MYO6Q9UM54 1294 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 LIPGQ9Y5X9 500 aa7.7□□□□□ -1.18
CD44-232ENST00000531118 RAI1Q7Z5J4 1906 aaPredicted RBP7.7□□□□□ -1.18
CD44-232ENST00000531118 DSCAMO60469 2012 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 A0A1W2PPR1 153 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 CLCA1A8K7I4 914 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 ARHGEF33A8MVX0 844 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 ZNF487B1APH4 448 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 H0YGG7 62 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 QSOX1O00391 747 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 NDC80O14777 642 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 P2RX6O15547 441 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 VPS26AO75436 327 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 TNFRSF21O75509 655 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 PDE9AO76083 593 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 GOSR1O95249 250 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 BMP7P18075 431 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 KDELR1P24390 212 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 AGTR2P50052 363 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 ARF3P61204 181 aaPredicted RBP7.69□□□□□ -1.18
CD44-232ENST00000531118 SNRPNP63162 240 aaKnown RBP7.69□□□□□ -1.18
CD44-232ENST00000531118 UBXN1Q04323 297 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 KRTAP1-1Q07627 177 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 USP10Q14694 798 aaKnown RBP7.69□□□□□ -1.18
CD44-232ENST00000531118 GARNL3Q5VVW2 1013 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 ZNF585AQ6P3V2 769 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 YTHDF3Q7Z739 585 aaKnown RBP7.69□□□□□ -1.18
CD44-232ENST00000531118 SULF2Q8IWU5 870 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 SLC22A15Q8IZD6 547 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 SHISA5Q8N114 240 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 ZFP62Q8NB50 900 aaPredicted RBP7.69□□□□□ -1.18
CD44-232ENST00000531118 CREB3L4Q8TEY5 395 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 RNASE6Q93091 150 aaKnown RBP7.69□□□□□ -1.18
CD44-232ENST00000531118 DNAJC1Q96KC8 554 aaKnown RBP7.69□□□□□ -1.18
CD44-232ENST00000531118 SPATA13Q96N96 652 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 SMC6Q96SB8 1091 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 GORASP1Q9BQQ3 440 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 RBSNQ9H1K0 784 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 CDCP1Q9H5V8 836 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 KIAA1549Q9HCM3 1950 aa7.69□□□□□ -1.18
CD44-232ENST00000531118 KRT87PA6NCN2 255 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 C5orf60A6NFR6 353 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 A6NHS1 94 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 C3orf70A6NLC5 250 aaPredicted RBP7.68□□□□□ -1.18
CD44-232ENST00000531118 FAM166BA8MTA8 275 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 KLRC4-KLRK1H3BQV0 150 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 MYO1FO00160 1098 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 BCKDKO14874 412 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 PEX1O43933 1283 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 SMPD2O60906 423 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 PROSCO94903 275 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 CRTAMO95727 393 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 AGTP01019 485 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 GHRHP01286 108 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 HRGP04196 525 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 RPN2P04844 631 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 CYP1A2P05177 515 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 TRHRP34981 398 aaPredicted RBP7.68□□□□□ -1.18
CD44-232ENST00000531118 BDKRB1P46663 353 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 HLCSP50747 726 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 CSE1LP55060 971 aaKnown RBP7.68□□□□□ -1.18
CD44-232ENST00000531118 SLC26A5P58743 744 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 GPR85P60893 370 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 DYNLT1P63172 113 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 PLOD1Q02809 727 aaPredicted RBP7.68□□□□□ -1.18
CD44-232ENST00000531118 ITIH4Q14624 930 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 MESDQ14696 234 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 NAA25Q14CX7 972 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 POU4F3Q15319 338 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 GXYLT1Q4G148 440 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 SFT2D3Q587I9 215 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 C1orf185Q5T7R7 199 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 RIPPLY2Q5TAB7 128 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 PODNL1Q6PEZ8 512 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 PACS1Q6VY07 963 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 C20orf204Q6ZNR8 217 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 TAS2R42Q7RTR8 314 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 RPS19BP1Q86WX3 136 aaKnown RBP7.68□□□□□ -1.18
CD44-232ENST00000531118 VRK3Q8IV63 474 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 PIANPQ8IYJ0 282 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 ZNF567Q8N184 647 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 KIF2BQ8N4N8 673 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 ENOX1Q8TC92 643 aaKnown RBP7.68□□□□□ -1.18
CD44-232ENST00000531118 DOCK7Q96N67 2140 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 NSUN5Q96P11 429 aaKnown RBP7.68□□□□□ -1.18
CD44-232ENST00000531118 CYTH2Q99418 400 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 LPAR4Q99677 370 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 C19orf43Q9BQ61 176 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 APOL2Q9BQE5 337 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 SMARCAL1Q9NZC9 954 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 IMPACTQ9P2X3 320 aa7.68□□□□□ -1.18
CD44-232ENST00000531118 LIMA1Q9UHB6 759 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms