RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 PCDHB11Q9Y5F2 797 aa13.82□□□□□ -0.2
TTC39A-216ENST00000530004 FRYLO94915 3013 aa13.82□□□□□ -0.2
TTC39A-216ENST00000530004 RHPN2P1A8MT19 583 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 BBIP1A8MTZ0 92 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 MRASO14807 208 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 ANKRD28O15084 1053 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 ANGPT2O15123 496 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 CBFA2T3O75081 653 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 LDOC1O95751 146 aaPredicted RBP13.81□□□□□ -0.2
TTC39A-216ENST00000530004 CKMT1AP12532 417 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 AMD1P17707 334 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 IL12AP29459 219 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 SHMT2P34897 504 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 ZFP36L2P47974 494 aaKnown RBP13.81□□□□□ -0.2
TTC39A-216ENST00000530004 CCR8P51685 355 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 POLR2JP52435 117 aaKnown RBP13.81□□□□□ -0.2
TTC39A-216ENST00000530004 RPS13P62277 151 aaKnown RBP13.81□□□□□ -0.2
TTC39A-216ENST00000530004 PTGR1Q14914 329 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 VPS26BQ4G0F5 336 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 C10orf62Q5T681 223 aaPredicted RBP13.81□□□□□ -0.2
TTC39A-216ENST00000530004 ICE2Q659A1 982 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 GUSBP11Q6P575 273 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 CYB5D1Q6P9G0 228 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 TMIGD1Q6UXZ0 262 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 ZNF438Q7Z4V0 828 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 AMIGO1Q86WK6 493 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 FAM129CQ86XR2 697 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 PARP9Q8IXQ6 854 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 KIAA2013Q8IYS2 634 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 ULK2Q8IYT8 1036 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 KRT78Q8N1N4 520 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 ZNF740Q8NDX6 193 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 ABHD11Q8NFV4 315 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 OR2A1Q8NGT9 310 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 BAHD1Q8TBE0 780 aaPredicted RBP13.81□□□□□ -0.2
TTC39A-216ENST00000530004 LCN9Q8WX39 176 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 UBE2E3Q969T4 207 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 SPDL1Q96EA4 605 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 CNDP2Q96KP4 475 aaKnown RBP13.81□□□□□ -0.2
TTC39A-216ENST00000530004 TMEM45AQ9NWC5 275 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 NDE1Q9NXR1 346 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 DLGAP4Q9Y2H0 992 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 TMED5Q9Y3A6 229 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 ZFHX2Q9C0A1 2572 aaPredicted RBP13.81□□□□□ -0.2
TTC39A-216ENST00000530004 RIF1Q5UIP0 2472 aaKnown RBP13.81□□□□□ -0.2
TTC39A-216ENST00000530004 A0A088AWK7 358 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 FAM234BA2RU67 622 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 LILRA5A6NI73 299 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 H7BY64 318 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 SH3BGRLO75368 114 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 ETHE1O95571 254 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 BCKDHAP12694 445 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 JAK1P23458 1154 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 MAPK1P28482 360 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 DUSP3P51452 185 aaPredicted RBP13.81□□□□□ -0.2
TTC39A-216ENST00000530004 DAB2P98082 770 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 PRDX1Q06830 199 aaKnown RBP13.81□□□□□ -0.2
TTC39A-216ENST00000530004 TBL3Q12788 808 aaKnown RBP13.81□□□□□ -0.2
TTC39A-216ENST00000530004 NR1D2Q14995 579 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 PLCL1Q15111 1095 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 FBXW10Q5XX13 1052 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 SCUBE1Q8IWY4 988 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 PGAM4Q8N0Y7 254 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 OR4E2Q8NGC2 313 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 NAT6Q93015 286 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 PRAP1Q96NZ9 151 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 SLC38A3Q99624 504 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 AIF1LQ9BQI0 150 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 WDR41Q9HAD4 459 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 SLC52A3Q9NQ40 469 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 DMRT3Q9NQL9 472 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 FTSJ1Q9UET6 329 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 NDUFAF1Q9Y375 327 aa13.81□□□□□ -0.2
TTC39A-216ENST00000530004 CPED1A4D0V7 1026 aa13.8□□□□□ -0.2
TTC39A-216ENST00000530004 CCDC154A6NI56 674 aa13.8□□□□□ -0.2
TTC39A-216ENST00000530004 FOXE1O00358 373 aaPredicted RBP13.8□□□□□ -0.2
TTC39A-216ENST00000530004 PRPS2P11908 318 aa13.8□□□□□ -0.2
TTC39A-216ENST00000530004 PNLIPP16233 465 aa13.8□□□□□ -0.2
TTC39A-216ENST00000530004 CKMT2P17540 419 aa13.8□□□□□ -0.2
TTC39A-216ENST00000530004 PEBP1P30086 187 aaKnown RBP13.8□□□□□ -0.2
TTC39A-216ENST00000530004 RAP1GDS1P52306 607 aa13.8□□□□□ -0.2
TTC39A-216ENST00000530004 PHEXP78562 749 aa13.8□□□□□ -0.2
TTC39A-216ENST00000530004 RBBP5Q15291 538 aaKnown RBP13.8□□□□□ -0.2
TTC39A-216ENST00000530004 NOXRED1Q6NXP6 359 aa13.8□□□□□ -0.2
TTC39A-216ENST00000530004 PIP4P1Q86T03 277 aa13.8□□□□□ -0.2
TTC39A-216ENST00000530004 RETREG3Q86VR2 466 aa13.8□□□□□ -0.2
TTC39A-216ENST00000530004 PCYOX1LQ8NBM8 494 aa13.8□□□□□ -0.2
TTC39A-216ENST00000530004 TSPEARQ8WU66 669 aa13.8□□□□□ -0.2
TTC39A-216ENST00000530004 CCDC74AQ96AQ1 378 aa13.8□□□□□ -0.2
TTC39A-216ENST00000530004 VPS33AQ96AX1 596 aa13.8□□□□□ -0.2
TTC39A-216ENST00000530004 FCRL1Q96LA6 429 aa13.8□□□□□ -0.2
TTC39A-216ENST00000530004 DPY30Q9C005 99 aa13.8□□□□□ -0.2
TTC39A-216ENST00000530004 EVA1BQ9NVM1 165 aa13.8□□□□□ -0.2
TTC39A-216ENST00000530004 SPHK1Q9NYA1 384 aa13.8□□□□□ -0.2
TTC39A-216ENST00000530004 OR6C2Q9NZP2 312 aa13.8□□□□□ -0.2
TTC39A-216ENST00000530004 BAIAP2L1Q9UHR4 511 aa13.8□□□□□ -0.2
TTC39A-216ENST00000530004 ASCC3Q8N3C0 2202 aaKnown RBP13.8□□□□□ -0.2
TTC39A-216ENST00000530004 A0A1W2PP18 115 aa13.79□□□□□ -0.2
TTC39A-216ENST00000530004 CFLARO15519 480 aa13.79□□□□□ -0.2
TTC39A-216ENST00000530004 PRICKLE3O43900 615 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms