RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 CLCNKBP51801 687 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 MINDY4Q4G0A6 757 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 PIGGQ5H8A4 983 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 KRBOX4Q5JUW0 171 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 C22orf42Q6IC83 251 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 EIF5AL1Q6IS14 154 aaKnown RBP7.41□□□□□ -1.22
CTNND1-223ENST00000529986 PRSS58Q8IYP2 241 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 NCSTNQ92542 709 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 ZBED6CLQ96FA7 236 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-223ENST00000529986 CPNE2Q96FN4 548 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-223ENST00000529986 BIRC8Q96P09 236 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 TSSK6Q9BXA6 273 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 OXCT2Q9BYC2 517 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-223ENST00000529986 ANKHQ9HCJ1 492 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 POT1Q9NUX5 634 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 VPS29Q9UBQ0 182 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 ZFR2Q9UPR6 939 aaKnown RBP7.41□□□□□ -1.22
CTNND1-223ENST00000529986 TBC1D3DA0A087WVF3 549 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 TBC1D3IA0A087WXS9 549 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 TBC1D3EA0A087X179 549 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 TBC1D3KA0A087X1G2 549 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 TBC1D3FA6NER0 549 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-223ENST00000529986 LOC730098B7Z3J9 87 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 TBC1D3LB9A6J9 549 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 PEX10O60683 326 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 IFNA21P01568 189 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 KLK1P06870 262 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 TBC1D3HP0C7X1 549 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 SNHG28P0DPA3 235 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 ZNF3P17036 446 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 EVI2BP34910 448 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 E2F1Q01094 437 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 NFATC3Q12968 1075 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 DPYSL2Q16555 572 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 DUOXA1Q1HG43 343 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 ATAT1Q5SQI0 421 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 TBC1D3GQ6DHY5 549 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 ALG1LQ6GMV1 187 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 SMYD5Q6GMV2 418 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 TBC1D3CQ6IPX1 549 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 CDHR3Q6ZTQ4 885 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 PIWIL3Q7Z3Z3 882 aaKnown RBP7.41□□□□□ -1.22
CTNND1-223ENST00000529986 TBC1D3Q8IZP1 549 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-223ENST00000529986 PSD4Q8NDX1 1056 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 OR51I1Q9H343 314 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 CALML5Q9NZT1 146 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 MGAT4CQ9UBM8 478 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 TMEM5Q9Y2B1 443 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 KCTD3Q9Y597 815 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 ARFGEF2Q9Y6D5 1785 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 LRRC37A3O60309 1634 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 BTBD19C9JJ37 291 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 SLC33A1O00400 549 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-223ENST00000529986 SLC9A3R1O14745 358 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-223ENST00000529986 DDNO94850 711 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-223ENST00000529986 CDK6Q00534 326 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 VGLL4Q14135 290 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 TAF1AQ15573 450 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-223ENST00000529986 NANOGP8Q6NSW7 305 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 CCDC54Q8NEL0 328 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 CREB3L1Q96BA8 519 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 MAPKAP1Q9BPZ7 522 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 ZNF696Q9H7X3 374 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 NANOGQ9H9S0 305 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 NLKQ9UBE8 527 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 SLC22A14Q9Y267 594 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 PTGDR2Q9Y5Y4 395 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 TVP23AA6NH52 213 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 HAS3O00219 553 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 GABRDO14764 452 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 RASAL1O95294 804 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 HMGN1P05114 100 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 STSP08842 583 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 HTR1BP28222 390 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 DAOAP59103 153 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 HNRNPDQ14103 355 aaKnown RBP7.41□□□□□ -1.22
CTNND1-223ENST00000529986 TMEM44Q2T9K0 475 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 ZSCAN1Q8NBB4 408 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 OR8D1Q8WZ84 308 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 NXPE2Q96DL1 559 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 TM9SF3Q9HD45 589 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 C14orf105Q9NVL8 296 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 FBXL21Q9UKT6 434 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 RIPK3Q9Y572 518 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 PLIN4Q96Q06 1357 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 KRBA1A5PL33 1030 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 LRRN3E7EW58 273 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 RAB36O95755 333 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 JUNP05412 331 aaKnown RBP7.41□□□□□ -1.22
CTNND1-223ENST00000529986 C8GP07360 202 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 ALPIP09923 528 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 ZNF20P17024 532 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 NDST2P52849 883 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 CRYBB1P53674 252 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-223ENST00000529986 CCL23P55773 120 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 FOXM1Q08050 763 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 AIMP2Q13155 320 aaKnown RBP7.41□□□□□ -1.22
CTNND1-223ENST00000529986 FGFBP1Q14512 234 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 CLCA4Q14CN2 919 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 ATP6AP1Q15904 470 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms