RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 HHATLQ9HCP6 504 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 PSD3Q9NYI0 1048 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.4□□□□□ -1.54
PCF11-202ENST00000528336 GRID1Q9ULK0 1009 aa5.4□□□□□ -1.54
PCF11-202ENST00000528336 PPIEQ9UNP9 301 aaKnown RBP5.4□□□□□ -1.54
PCF11-202ENST00000528336 CHTOPQ9Y3Y2 248 aaKnown RBP5.4□□□□□ -1.54
PCF11-202ENST00000528336 ACEP12821 1306 aa5.4□□□□□ -1.55
PCF11-202ENST00000528336 TTC21BQ7Z4L5 1316 aa5.4□□□□□ -1.55
PCF11-202ENST00000528336 NHSL1Q5SYE7 1610 aa5.4□□□□□ -1.55
PCF11-202ENST00000528336 SBNO1A3KN83 1393 aa5.4□□□□□ -1.55
PCF11-202ENST00000528336 BRD4O60885 1362 aaPredicted RBP5.4□□□□□ -1.55
PCF11-202ENST00000528336 ITSN1Q15811 1721 aa5.4□□□□□ -1.55
PCF11-202ENST00000528336 CPSF1Q10570 1443 aaKnown RBP5.4□□□□□ -1.55
PCF11-202ENST00000528336 COL16A1Q07092 1604 aaPredicted RBP5.39□□□□□ -1.55
PCF11-202ENST00000528336 PRSS51A0A1B0GVH4 220 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 L7N2F9 121 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 KIF2AO00139 706 aaPredicted RBP5.39□□□□□ -1.55
PCF11-202ENST00000528336 IFIT3O14879 490 aaKnown RBP5.39□□□□□ -1.55
PCF11-202ENST00000528336 TO15178 435 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 SSX4O60224 188 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 PRKNO60260 465 aaPredicted RBP5.39□□□□□ -1.55
PCF11-202ENST00000528336 E2F6O75461 281 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 BCL10O95999 233 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 SP1P08047 785 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 ZFYP08048 801 aaPredicted RBP5.39□□□□□ -1.55
PCF11-202ENST00000528336 PDGFRAP16234 1089 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 ERCC2P18074 760 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 EPHA2P29317 976 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 GDI1P31150 447 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 GABRA5P31644 462 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 RFC4P35249 363 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 ARSEP51690 589 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 CAPZA1P52907 286 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 TRA2BP62995 288 aaKnown RBP5.39□□□□□ -1.55
PCF11-202ENST00000528336 IL11RAQ14626 422 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 TWISTNBQ3B726 338 aaPredicted RBP5.39□□□□□ -1.55
PCF11-202ENST00000528336 KRTAP24-1Q3LI83 254 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 CCNYL2Q5T2Q4 361 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 MIER3Q7Z3K6 550 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 CRYBG2Q8N1P7 616 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 FAM133AQ8N9E0 248 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 MCUQ8NE86 351 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 PSMA8Q8TAA3 256 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 ZNF473Q8WTR7 871 aaKnown RBP5.39□□□□□ -1.55
PCF11-202ENST00000528336 PRCCQ92733 491 aaPredicted RBP5.39□□□□□ -1.55
PCF11-202ENST00000528336 DAZLQ92904 295 aaKnown RBP5.39□□□□□ -1.55
PCF11-202ENST00000528336 PGLYRP2Q96PD5 576 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 GAL3ST4Q96RP7 486 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 CCDC106Q9BWC9 280 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 KRTAP2-2Q9BYT5 123 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 BICC1Q9H694 974 aaKnown RBP5.39□□□□□ -1.55
PCF11-202ENST00000528336 GLRX2Q9NS18 164 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 ZNHIT6Q9NWK9 470 aaKnown RBP5.39□□□□□ -1.55
PCF11-202ENST00000528336 NPAP1Q9NZP6 1156 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 HMG20BQ9P0W2 317 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 KCNK7Q9Y2U2 307 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 MRPL11Q9Y3B7 192 aaKnown RBP5.39□□□□□ -1.55
PCF11-202ENST00000528336 LIPGQ9Y5X9 500 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 FAM205AQ6ZU69 1335 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 JCADQ9P266 1359 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 USP6P35125 1406 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 SSH2Q76I76 1423 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 CD163L1Q9NR16 1453 aa5.39□□□□□ -1.55
PCF11-202ENST00000528336 PHLPP1O60346 1717 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 LOC100509620A0A075B734 347 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 A0A087WV48 116 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 ARPC4-TTLL3A0A0A6YYG9 625 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 PRR23AA6NEV1 266 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 ERVV-2B6SEH9 535 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 CXCL11O14625 94 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 LDLRP01130 860 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 ASGR1P07306 291 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 GHRP10912 638 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 VPREB1P12018 145 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 GJA1P17302 382 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 CCR3P51677 355 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 ELP6Q0PNE2 266 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 HYAL1Q12794 435 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 KRT79Q5XKE5 535 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 PLA2G4FQ68DD2 849 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 FAM109BQ6ICB4 259 aaPredicted RBP5.38□□□□□ -1.55
PCF11-202ENST00000528336 SLC27A1Q6PCB7 646 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 ISLR2Q6UXK2 745 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 C15orf39Q6ZRI6 1047 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 UNC5CLQ8IV45 518 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 FBXO39Q8N4B4 442 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 KLHDC9Q8NEP7 349 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 C16orf70Q9BSU1 422 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 PELI2Q9HAT8 420 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 ZBTB20Q9HC78 741 aaPredicted RBP5.38□□□□□ -1.55
PCF11-202ENST00000528336 NOSIPQ9Y314 301 aaKnown RBP5.38□□□□□ -1.55
PCF11-202ENST00000528336 SPIN1Q9Y657 262 aaPredicted RBP5.38□□□□□ -1.55
PCF11-202ENST00000528336 KIF7Q2M1P5 1343 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 MROH5Q6ZUA9 1318 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 ARHGEF10O15013 1369 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 KTN1Q86UP2 1357 aaKnown RBP5.38□□□□□ -1.55
PCF11-202ENST00000528336 ANKRD36BQ8N2N9 1353 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 CCDC7Q96M83 1385 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 TNS3Q68CZ2 1445 aa5.38□□□□□ -1.55
PCF11-202ENST00000528336 RGPD8O14715 1765 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms