RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 CNOT10Q9H9A5 744 aaKnown RBP11.49□□□□□ -0.57
TRAPPC4-209ENST00000528230 ANKHQ9HCJ1 492 aa11.49□□□□□ -0.57
TRAPPC4-209ENST00000528230 ZFP69BQ9UJL9 534 aa11.49□□□□□ -0.57
TRAPPC4-209ENST00000528230 FBXL4Q9UKA2 621 aa11.49□□□□□ -0.57
TRAPPC4-209ENST00000528230 MRPS2Q9Y399 296 aaKnown RBP11.49□□□□□ -0.57
TRAPPC4-209ENST00000528230 BAHCC1Q9P281 2608 aa11.49□□□□□ -0.57
TRAPPC4-209ENST00000528230 CCDC189A1A4V9 331 aa11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 IDSB3KWA1 339 aa11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 H2AFYO75367 372 aaKnown RBP11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 FAM155BO75949 473 aa11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 BMP10O95393 424 aa11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 HPP00738 406 aa11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 SLC35E2BP0CK96 405 aa11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 GNAZP19086 355 aa11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 IL10P22301 178 aa11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 CXCR2P25025 360 aa11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 SKP1P63208 163 aa11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 REEP5Q00765 189 aa11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 MEF2AQ02078 507 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 HERC3Q15034 1050 aa11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 IGFL3Q6UXB1 125 aa11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 RAPH1Q70E73 1250 aa11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 AFAP1L2Q8N4X5 818 aa11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 KCT2Q8NC54 265 aa11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 PDPRQ8NCN5 879 aa11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 TRPV3Q8NET8 790 aa11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 OR9A4Q8NGU2 314 aa11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 STAG3L4Q8TBR4 150 aa11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 NT5CQ8TCD5 201 aa11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 PITHD1Q9GZP4 211 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 ACSS3Q9H6R3 686 aa11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 ZNF552Q9H707 407 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 CLK4Q9HAZ1 481 aaKnown RBP11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 NMRAL1Q9HBL8 299 aa11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 GPRC5BQ9NZH0 403 aa11.48□□□□□ -0.57
TRAPPC4-209ENST00000528230 BOD1L1Q8NFC6 3051 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 LOC102723996A0A087X1L8 192 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 URADA6NGE7 173 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 MAP2K7O14733 419 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 TAPBPO15533 448 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 WDR47O94967 919 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 STATHP02808 62 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 HEXBP07686 556 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 C1GALT1C1LP0DN25 315 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 ACPPP15309 386 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 GSTM2P28161 218 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 KCNC4Q03721 635 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 RGS1Q08116 209 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 OR4D1Q15615 310 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 IRAK1BP1Q5VVH5 260 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 TMEM205Q6UW68 189 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 SLCO4C1Q6ZQN7 724 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 NDUFAF7Q7L592 441 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 TBC1D1Q86TI0 1168 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 ISCA2Q86U28 154 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 ZC3H7AQ8IWR0 971 aaKnown RBP11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 PRSS58Q8IYP2 241 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 SPATA6LQ8N4H0 392 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 ZNF740Q8NDX6 193 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 OR51Q1Q8NH59 317 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 IFT81Q8WYA0 676 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 TM9SF4Q92544 642 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 SEC16BQ96JE7 1060 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 TSNARE1Q96NA8 513 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 FMO2Q99518 471 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 MACROD1Q9BQ69 325 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 EHD1Q9H4M9 534 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 NT5DC2Q9H857 520 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 NINJ2Q9NZG7 142 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 COPG2Q9UBF2 871 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 PTBP2Q9UKA9 531 aaKnown RBP11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 ACOT9Q9Y305 439 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 SCN2AQ99250 2005 aa11.47□□□□□ -0.57
TRAPPC4-209ENST00000528230 A0A087X1B8 175 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 NCF1BA6NI72 391 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 NCF1CA8MVU1 366 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 FFAR3O14843 346 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 GPR42O15529 346 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 NDUFS4O43181 175 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 STK16O75716 305 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 KLHL18O94889 574 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 S100BP04271 92 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 SERPINA6P08185 405 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 LTA4HP09960 611 aaKnown RBP11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 NCF1P14598 390 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 ALOX12P18054 663 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 IL1RNP18510 177 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 ITGA3P26006 1051 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 ECHS1P30084 290 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 GDF5P43026 501 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 KCNC1P48547 511 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 SNRPNP63162 240 aaKnown RBP11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 FOXK1P85037 733 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 MAT1AQ00266 395 aaKnown RBP11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 CDC16Q13042 620 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 SLMAPQ14BN4 828 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 EFTUD2Q15029 972 aaKnown RBP eCLIP11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 SYT16Q17RD7 645 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 NADK2Q4G0N4 442 aa11.46□□□□□ -0.57
TRAPPC4-209ENST00000528230 ABHD13Q7L211 337 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms