RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 C8orf89P0DMQ9 161 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 EDN3P14138 238 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 NPPBP16860 134 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 BCL6P41182 706 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 CCR8P51685 355 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 ARL4CP56559 192 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 SKP1P63208 163 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 ARG2P78540 354 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 DR1Q01658 176 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 CBLBQ13191 982 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 NAA30Q147X3 362 aaPredicted RBP13.44□□□□□ -0.26
CAPN1-212ENST00000527887 C4orf17Q53FE4 359 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 RBM20Q5T481 1227 aaKnown RBP13.44□□□□□ -0.26
CAPN1-212ENST00000527887 HECTD2Q5U5R9 776 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 STEAP4Q687X5 459 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 LINC00696Q6ZRV3 163 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 STRA8Q7Z7C7 330 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 ASPGQ86U10 573 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 PLD3Q8IV08 490 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 OR4K1Q8NGD4 311 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 OR56A3Q8NH54 315 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 SLC13A3Q8WWT9 602 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 PSMF1Q92530 271 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 CNDP1Q96KN2 507 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 C5orf34Q96MH7 638 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 CYTH2Q99418 400 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 RHOXF2Q9BQY4 288 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 RAB17Q9H0T7 212 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 ATG10Q9H0Y0 220 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 ANKHQ9HCJ1 492 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 ARL15Q9NXU5 204 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.44□□□□□ -0.26
CAPN1-212ENST00000527887 CSAG2Q9Y5P2 127 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 TEX264Q9Y6I9 313 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 V9GYY5 206 aaPredicted RBP13.44□□□□□ -0.26
CAPN1-212ENST00000527887 PCM1Q15154 2024 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 DOPEY1Q5JWR5 2465 aa13.44□□□□□ -0.26
CAPN1-212ENST00000527887 TSPAN12O95859 305 aa13.43□□□□□ -0.26
CAPN1-212ENST00000527887 ELK3P41970 407 aa13.43□□□□□ -0.26
CAPN1-212ENST00000527887 AGTR2P50052 363 aa13.43□□□□□ -0.26
CAPN1-212ENST00000527887 PWP1Q13610 501 aa13.43□□□□□ -0.26
CAPN1-212ENST00000527887 HERC3Q15034 1050 aa13.43□□□□□ -0.26
CAPN1-212ENST00000527887 PCOLCEQ15113 449 aa13.43□□□□□ -0.26
CAPN1-212ENST00000527887 HIBCHQ6NVY1 386 aaPredicted RBP13.43□□□□□ -0.26
CAPN1-212ENST00000527887 FAM180AQ6UWF9 173 aa13.43□□□□□ -0.26
CAPN1-212ENST00000527887 IGDCC3Q8IVU1 814 aa13.43□□□□□ -0.26
CAPN1-212ENST00000527887 BCORP1Q8N888 145 aa13.43□□□□□ -0.26
CAPN1-212ENST00000527887 MFSD9Q8NBP5 474 aa13.43□□□□□ -0.26
CAPN1-212ENST00000527887 OR9A4Q8NGU2 314 aa13.43□□□□□ -0.26
CAPN1-212ENST00000527887 OR51Q1Q8NH59 317 aa13.43□□□□□ -0.26
CAPN1-212ENST00000527887 BRIX1Q8TDN6 353 aaKnown RBP13.43□□□□□ -0.26
CAPN1-212ENST00000527887 GRHL3Q8TE85 626 aa13.43□□□□□ -0.26
CAPN1-212ENST00000527887 FBXL8Q96CD0 374 aa13.43□□□□□ -0.26
CAPN1-212ENST00000527887 SNF8Q96H20 258 aa13.43□□□□□ -0.26
CAPN1-212ENST00000527887 IMMP1LQ96LU5 166 aa13.43□□□□□ -0.26
CAPN1-212ENST00000527887 VN1R1Q9GZP7 353 aa13.43□□□□□ -0.26
CAPN1-212ENST00000527887 CLK4Q9HAZ1 481 aaKnown RBP13.43□□□□□ -0.26
CAPN1-212ENST00000527887 NSMCE4AQ9NXX6 385 aa13.43□□□□□ -0.26
CAPN1-212ENST00000527887 PTGFRNQ9P2B2 879 aa13.43□□□□□ -0.26
CAPN1-212ENST00000527887 NTNG1Q9Y2I2 539 aa13.43□□□□□ -0.26
CAPN1-212ENST00000527887 UTP11Q9Y3A2 253 aaKnown RBP13.43□□□□□ -0.26
CAPN1-212ENST00000527887 NBPF19A0A087WUL8 3843 aa13.42□□□□□ -0.26
CAPN1-212ENST00000527887 TEX15Q9BXT5 2789 aa13.42□□□□□ -0.26
CAPN1-212ENST00000527887 CDK2AP1O14519 115 aa13.42□□□□□ -0.26
CAPN1-212ENST00000527887 RAD51CO43502 376 aa13.42□□□□□ -0.26
CAPN1-212ENST00000527887 ATP8B1O43520 1251 aa13.42□□□□□ -0.26
CAPN1-212ENST00000527887 LDLRP01130 860 aa13.42□□□□□ -0.26
CAPN1-212ENST00000527887 CDH1P12830 882 aa13.42□□□□□ -0.26
CAPN1-212ENST00000527887 TNFSF10P50591 281 aa13.42□□□□□ -0.26
CAPN1-212ENST00000527887 EEF1A2Q05639 463 aaKnown RBP13.42□□□□□ -0.26
CAPN1-212ENST00000527887 MGAT5Q09328 741 aa13.42□□□□□ -0.26
CAPN1-212ENST00000527887 PHKG1Q16816 387 aa13.42□□□□□ -0.26
CAPN1-212ENST00000527887 SYT16Q17RD7 645 aa13.42□□□□□ -0.26
CAPN1-212ENST00000527887 PLAG1Q6DJT9 500 aa13.42□□□□□ -0.26
CAPN1-212ENST00000527887 CPEB2Q7Z5Q1 589 aaKnown RBP13.42□□□□□ -0.26
CAPN1-212ENST00000527887 SLC26A11Q86WA9 606 aa13.42□□□□□ -0.26
CAPN1-212ENST00000527887 KLHL7Q8IXQ5 586 aa13.42□□□□□ -0.26
CAPN1-212ENST00000527887 NKAPQ8N5F7 415 aaKnown RBP13.42□□□□□ -0.26
CAPN1-212ENST00000527887 GPATCH11Q8N954 259 aa13.42□□□□□ -0.26
CAPN1-212ENST00000527887 BBOF1Q8ND07 529 aa13.42□□□□□ -0.26
CAPN1-212ENST00000527887 OR1N1Q8NGS0 311 aa13.42□□□□□ -0.26
CAPN1-212ENST00000527887 SUN3Q8TAQ9 357 aa13.42□□□□□ -0.26
CAPN1-212ENST00000527887 OR1F2PQ96R84 312 aa13.42□□□□□ -0.26
CAPN1-212ENST00000527887 MESP1Q9BRJ9 268 aa13.42□□□□□ -0.26
CAPN1-212ENST00000527887 ERP44Q9BS26 406 aa13.42□□□□□ -0.26
CAPN1-212ENST00000527887 PLAC1Q9HBJ0 212 aa13.42□□□□□ -0.26
CAPN1-212ENST00000527887 ZFATQ9P243 1243 aa13.42□□□□□ -0.26
CAPN1-212ENST00000527887 DMGDHQ9UI17 866 aaKnown RBP13.42□□□□□ -0.26
CAPN1-212ENST00000527887 ERRFI1Q9UJM3 462 aaPredicted RBP13.42□□□□□ -0.26
CAPN1-212ENST00000527887 CCDC88CQ9P219 2028 aa13.42□□□□□ -0.26
CAPN1-212ENST00000527887 TRBC2A0A5B9 178 aa13.41□□□□□ -0.26
CAPN1-212ENST00000527887 FEZF1A0PJY2 475 aa13.41□□□□□ -0.26
CAPN1-212ENST00000527887 FFAR3O14843 346 aa13.41□□□□□ -0.26
CAPN1-212ENST00000527887 GPR42O15529 346 aa13.41□□□□□ -0.26
CAPN1-212ENST00000527887 LCMT2O60294 686 aaKnown RBP13.41□□□□□ -0.26
CAPN1-212ENST00000527887 BANF1O75531 89 aa13.41□□□□□ -0.26
CAPN1-212ENST00000527887 SEC31AO94979 1220 aaKnown RBP13.41□□□□□ -0.26
CAPN1-212ENST00000527887 AHRP35869 848 aa13.41□□□□□ -0.26
CAPN1-212ENST00000527887 XCR1P46094 333 aa13.41□□□□□ -0.26
CAPN1-212ENST00000527887 ITGA8P53708 1063 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms