RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 RPS9P46781 194 aaKnown RBP14.54□□□□□ -0.08
USP47-207ENST00000527733 CDH12P55289 794 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 C18orf21Q32NC0 220 aaPredicted RBP14.54□□□□□ -0.08
USP47-207ENST00000527733 BROXQ5VW32 411 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 NIPAL1Q6NVV3 410 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 PLPP6Q8IY26 295 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 CADM2Q8N3J6 435 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 FAM47BQ8NA70 645 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 POMGNT2Q8NAT1 580 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 CHFRQ96EP1 664 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 COL21A1Q96P44 957 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 SMPD3Q9NY59 655 aaPredicted RBP14.54□□□□□ -0.08
USP47-207ENST00000527733 PTGDR2Q9Y5Y4 395 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 PIM1P11309 404 aaPredicted RBP14.54□□□□□ -0.08
USP47-207ENST00000527733 CD9P21926 228 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 TTKP33981 857 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 MLLT1Q03111 559 aaPredicted RBP14.54□□□□□ -0.08
USP47-207ENST00000527733 IRF4Q15306 451 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 LILRA6Q6PI73 481 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 PDZD3Q86UT5 571 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 CLVS1Q8IUQ0 354 aaPredicted RBP14.54□□□□□ -0.08
USP47-207ENST00000527733 RASGRP3Q8IV61 690 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 ZNF540Q8NDQ6 660 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 ACVR1CQ8NER5 493 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 OR5AR1Q8NGP9 310 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 MSANTD3Q96H12 275 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 YIPF4Q9BSR8 244 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 GSTO2Q9H4Y5 243 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 TESMINQ9Y4I5 508 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 FGF4P08620 206 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 THRBP10828 461 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 AOAHP28039 575 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 YAP1P46937 504 aaKnown RBP14.54□□□□□ -0.08
USP47-207ENST00000527733 KCNC1P48547 511 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 CCT3P49368 545 aaKnown RBP14.54□□□□□ -0.08
USP47-207ENST00000527733 RABL3Q5HYI8 236 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 KANK2Q63ZY3 851 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 ADGRD2Q7Z7M1 963 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 KCT2Q8NC54 265 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 OR4K1Q8NGD4 311 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 HUS1BQ8NHY5 278 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 MYDGFQ969H8 173 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 CAMK1GQ96NX5 476 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 KCNC2Q96PR1 638 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 CCDC106Q9BWC9 280 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 PRDM8Q9NQV8 689 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 ZSCAN32Q9NX65 697 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 DNAJB9Q9UBS3 223 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 H7C0S8 307 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 B4GALT2O60909 372 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 UGT2B11O75310 529 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 ALPPP05187 535 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 JAK1P23458 1154 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 GABRB3P28472 473 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 FEN1P39748 380 aaKnown RBP14.54□□□□□ -0.08
USP47-207ENST00000527733 PRLHRP49683 370 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 VSX2P58304 361 aaPredicted RBP14.54□□□□□ -0.08
USP47-207ENST00000527733 HHEXQ03014 270 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 PTPRRQ15256 657 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 ARHGAP40Q5TG30 622 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 SVOPLQ8N434 492 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 OR2L2Q8NH16 312 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 PDLIM5Q96HC4 596 aaKnown RBP14.54□□□□□ -0.08
USP47-207ENST00000527733 SMAD5Q99717 465 aaKnown RBP14.54□□□□□ -0.08
USP47-207ENST00000527733 ACTR3BQ9P1U1 418 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 WASF2Q9Y6W5 498 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 PSMA3P25788 255 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 IL12BP29460 328 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 MMP12P39900 470 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 CCR2P41597 374 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 CTSKP43235 329 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 CDK6Q00534 326 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 SIM2Q14190 667 aaPredicted RBP14.53□□□□□ -0.08
USP47-207ENST00000527733 OR56A1Q8NGH5 318 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 CANT1Q8WVQ1 401 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 TMEM74Q96NL1 305 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 ZNF347Q96SE7 839 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 DGCR6LQ9BY27 220 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 PDE7BQ9NP56 450 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 PNO1Q9NRX1 252 aaKnown RBP14.53□□□□□ -0.08
USP47-207ENST00000527733 TBC1D23Q9NUY8 699 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 DOCK3Q8IZD9 2030 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 FAM221BA6H8Z2 402 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 C6orf47O95873 294 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 KLK3P07288 261 aaPredicted RBP14.53□□□□□ -0.08
USP47-207ENST00000527733 RPS17P08708 135 aaKnown RBP14.53□□□□□ -0.08
USP47-207ENST00000527733 SAGP10523 405 aaPredicted RBP14.53□□□□□ -0.08
USP47-207ENST00000527733 SRP54P61011 504 aaKnown RBP14.53□□□□□ -0.08
USP47-207ENST00000527733 RPS15AP62244 130 aaKnown RBP14.53□□□□□ -0.08
USP47-207ENST00000527733 EIPR1Q53HC9 387 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 AFMIDQ63HM1 303 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 GIPC3Q8TF64 312 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 NMD3Q96D46 503 aaKnown RBP14.53□□□□□ -0.08
USP47-207ENST00000527733 F2RL3Q96RI0 385 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 MARK1Q9P0L2 795 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 ARHGEF33A8MVX0 844 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 DUX1O43812 170 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 TSPAN19P0C672 248 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 IGFALSP35858 605 aa14.53□□□□□ -0.08
USP47-207ENST00000527733 PTSQ03393 145 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms