RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 GPR156Q8NFN8 814 aa19.63■□□□□ 0.73
SMIM3-201ENST00000526627 UBE2FQ969M7 185 aa19.63■□□□□ 0.73
SMIM3-201ENST00000526627 TPD52L3Q96J77 140 aa19.63■□□□□ 0.73
SMIM3-201ENST00000526627 PITX2Q99697 317 aa19.63■□□□□ 0.73
SMIM3-201ENST00000526627 ASPSCR1Q9BZE9 553 aa19.63■□□□□ 0.73
SMIM3-201ENST00000526627 REEP1Q9H902 201 aa19.63■□□□□ 0.73
SMIM3-201ENST00000526627 DNAAF2Q9NVR5 837 aaKnown RBP19.63■□□□□ 0.73
SMIM3-201ENST00000526627 SH2B3Q9UQQ2 575 aa19.63■□□□□ 0.73
SMIM3-201ENST00000526627 ITM2BQ9Y287 266 aa19.63■□□□□ 0.73
SMIM3-201ENST00000526627 TPRKBQ9Y3C4 175 aa19.63■□□□□ 0.73
SMIM3-201ENST00000526627 WNT6Q9Y6F9 365 aa19.63■□□□□ 0.73
SMIM3-201ENST00000526627 ABCB1P08183 1280 aaPredicted RBP19.63■□□□□ 0.73
SMIM3-201ENST00000526627 ACRP10323 421 aa19.63■□□□□ 0.73
SMIM3-201ENST00000526627 TIA1P31483 386 aaKnown RBP eCLIP19.63■□□□□ 0.73
SMIM3-201ENST00000526627 TMEM220Q6QAJ8 160 aa19.63■□□□□ 0.73
SMIM3-201ENST00000526627 NAGSQ8N159 534 aa19.63■□□□□ 0.73
SMIM3-201ENST00000526627 PPP1R14BQ96C90 147 aa19.63■□□□□ 0.73
SMIM3-201ENST00000526627 YIPF6Q96EC8 236 aa19.63■□□□□ 0.73
SMIM3-201ENST00000526627 APOL4Q9BPW4 351 aa19.63■□□□□ 0.73
SMIM3-201ENST00000526627 PALMDQ9NP74 551 aa19.63■□□□□ 0.73
SMIM3-201ENST00000526627 GPATCH2Q9NW75 528 aa19.63■□□□□ 0.73
SMIM3-201ENST00000526627 DKK3Q9UBP4 350 aa19.63■□□□□ 0.73
SMIM3-201ENST00000526627 PCM1Q15154 2024 aa19.63■□□□□ 0.73
SMIM3-201ENST00000526627 NOTCH4Q99466 2003 aa19.63■□□□□ 0.73
SMIM3-201ENST00000526627 HIDE1A8MVS5 230 aa19.62■□□□□ 0.73
SMIM3-201ENST00000526627 PBLDP30039 288 aaPredicted RBP19.62■□□□□ 0.73
SMIM3-201ENST00000526627 PCGF2P35227 344 aa19.62■□□□□ 0.73
SMIM3-201ENST00000526627 MVDP53602 400 aa19.62■□□□□ 0.73
SMIM3-201ENST00000526627 ERVFC1P60507 584 aa19.62■□□□□ 0.73
SMIM3-201ENST00000526627 GRIN2CQ14957 1233 aa19.62■□□□□ 0.73
SMIM3-201ENST00000526627 SPIN4Q56A73 249 aa19.62■□□□□ 0.73
SMIM3-201ENST00000526627 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.62■□□□□ 0.73
SMIM3-201ENST00000526627 KIAA1614Q5VZ46 1190 aa19.62■□□□□ 0.73
SMIM3-201ENST00000526627 FAM124AQ86V42 546 aa19.62■□□□□ 0.73
SMIM3-201ENST00000526627 TSPYL5Q86VY4 417 aaPredicted RBP19.62■□□□□ 0.73
SMIM3-201ENST00000526627 PARP8Q8N3A8 854 aa19.62■□□□□ 0.73
SMIM3-201ENST00000526627 ZNF557Q8N988 423 aaPredicted RBP19.62■□□□□ 0.73
SMIM3-201ENST00000526627 SNRNP27Q8WVK2 155 aaKnown RBP19.62■□□□□ 0.73
SMIM3-201ENST00000526627 AP2M1Q96CW1 435 aa19.62■□□□□ 0.73
SMIM3-201ENST00000526627 KRT84Q9NSB2 600 aa19.62■□□□□ 0.73
SMIM3-201ENST00000526627 LAMA2P24043 3122 aaKnown RBP19.62■□□□□ 0.73
SMIM3-201ENST00000526627 C9P02748 559 aa19.62■□□□□ 0.73
SMIM3-201ENST00000526627 MT-ND2P03891 347 aa19.62■□□□□ 0.73
SMIM3-201ENST00000526627 CLTBP09497 229 aa19.62■□□□□ 0.73
SMIM3-201ENST00000526627 ZNF12P17014 697 aa19.62■□□□□ 0.73
SMIM3-201ENST00000526627 ZNF8P17098 575 aaPredicted RBP19.62■□□□□ 0.73
SMIM3-201ENST00000526627 DDX6P26196 483 aaKnown RBP eCLIP19.62■□□□□ 0.73
SMIM3-201ENST00000526627 AQP1P29972 269 aa19.62■□□□□ 0.73
SMIM3-201ENST00000526627 OPRL1P41146 370 aa19.62■□□□□ 0.73
SMIM3-201ENST00000526627 ANXA8L1Q5VT79 327 aa19.62■□□□□ 0.73
SMIM3-201ENST00000526627 DCDC5Q6ZRR9 648 aa19.62■□□□□ 0.73
SMIM3-201ENST00000526627 OTOP2Q7RTS6 562 aa19.62■□□□□ 0.73
SMIM3-201ENST00000526627 NLRP8Q86W28 1048 aa19.62■□□□□ 0.73
SMIM3-201ENST00000526627 ZNF366Q8N895 744 aa19.62■□□□□ 0.73
SMIM3-201ENST00000526627 ATG16L2Q8NAA4 619 aa19.62■□□□□ 0.73
SMIM3-201ENST00000526627 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.62■□□□□ 0.734e-26■■■■■ 42.8
SMIM3-201ENST00000526627 ZNF480Q8WV37 535 aa19.62■□□□□ 0.73
SMIM3-201ENST00000526627 RORBQ92753 470 aa19.62■□□□□ 0.73
SMIM3-201ENST00000526627 RNASET2O00584 256 aaKnown RBP19.61■□□□□ 0.73
SMIM3-201ENST00000526627 PCDH7O60245 1069 aa19.61■□□□□ 0.73
SMIM3-201ENST00000526627 WBP4O75554 376 aaKnown RBP19.61■□□□□ 0.73
SMIM3-201ENST00000526627 C1orf105O95561 183 aa19.61■□□□□ 0.73
SMIM3-201ENST00000526627 NTRK1P04629 796 aa19.61■□□□□ 0.73
SMIM3-201ENST00000526627 HPCAL1P37235 193 aa19.61■□□□□ 0.73
SMIM3-201ENST00000526627 CATSPEREQ5SY80 951 aa19.61■□□□□ 0.73
SMIM3-201ENST00000526627 SYT6Q5T7P8 510 aaPredicted RBP19.61■□□□□ 0.73
SMIM3-201ENST00000526627 C16orf87Q6PH81 154 aa19.61■□□□□ 0.73
SMIM3-201ENST00000526627 ZNF852Q6ZMS4 543 aa19.61■□□□□ 0.73
SMIM3-201ENST00000526627 PARS2Q7L3T8 475 aaKnown RBP19.61■□□□□ 0.73
SMIM3-201ENST00000526627 TMPRSS11BQ86T26 416 aa19.61■□□□□ 0.73
SMIM3-201ENST00000526627 LMNTD1Q8N9Z9 388 aa19.61■□□□□ 0.73
SMIM3-201ENST00000526627 RNF217Q8TC41 542 aa19.61■□□□□ 0.73
SMIM3-201ENST00000526627 EPYCQ99645 322 aa19.61■□□□□ 0.73
SMIM3-201ENST00000526627 ATP6V1HQ9UI12 483 aa19.61■□□□□ 0.73
SMIM3-201ENST00000526627 MTCL1Q9Y4B5 1905 aaKnown RBP19.61■□□□□ 0.73
SMIM3-201ENST00000526627 SOD1P00441 154 aa19.6■□□□□ 0.73
SMIM3-201ENST00000526627 RHOP08100 348 aa19.6■□□□□ 0.73
SMIM3-201ENST00000526627 ELFN1P0C7U0 828 aa19.6■□□□□ 0.73
SMIM3-201ENST00000526627 XPAP23025 273 aaPredicted RBP19.6■□□□□ 0.73
SMIM3-201ENST00000526627 PPIBP23284 216 aaKnown RBP19.6■□□□□ 0.73
SMIM3-201ENST00000526627 KRT20P35900 424 aa19.6■□□□□ 0.73
SMIM3-201ENST00000526627 RPP38P78345 283 aaKnown RBP19.6■□□□□ 0.73
SMIM3-201ENST00000526627 NPRL3Q12980 569 aa19.6■□□□□ 0.73
SMIM3-201ENST00000526627 ADPRMQ3LIE5 342 aa19.6■□□□□ 0.73
SMIM3-201ENST00000526627 MED27Q6P2C8 311 aa19.6■□□□□ 0.73
SMIM3-201ENST00000526627 ZNF554Q86TJ5 538 aa19.6■□□□□ 0.73
SMIM3-201ENST00000526627 VPS37AQ8NEZ2 397 aa19.6■□□□□ 0.73
SMIM3-201ENST00000526627 VN1R2Q8NFZ6 395 aa19.6■□□□□ 0.73
SMIM3-201ENST00000526627 APH1BQ8WW43 257 aa19.6■□□□□ 0.73
SMIM3-201ENST00000526627 ZSWIM3Q96MP5 696 aa19.6■□□□□ 0.73
SMIM3-201ENST00000526627 SIGLEC11Q96RL6 698 aa19.6■□□□□ 0.73
SMIM3-201ENST00000526627 SCN3BQ9NY72 215 aa19.6■□□□□ 0.73
SMIM3-201ENST00000526627 LMCD1Q9NZU5 365 aa19.6■□□□□ 0.73
SMIM3-201ENST00000526627 MARK1Q9P0L2 795 aa19.6■□□□□ 0.73
SMIM3-201ENST00000526627 SH3BP4Q9P0V3 963 aa19.6■□□□□ 0.73
SMIM3-201ENST00000526627 KIF17Q9P2E2 1029 aa19.6■□□□□ 0.73
SMIM3-201ENST00000526627 KCNE2Q9Y6J6 123 aa19.6■□□□□ 0.73
SMIM3-201ENST00000526627 PDE4DIPQ5VU43 2346 aa19.6■□□□□ 0.73
SMIM3-201ENST00000526627 MGAT4DA6NG13 374 aa19.6■□□□□ 0.73
SMIM3-201ENST00000526627 SPINT1O43278 529 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms