RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 FEZF1A0PJY2 475 aa13.43□□□□□ -0.26
CPSF1-201ENST00000526271 ZNF860A6NHJ4 632 aa13.43□□□□□ -0.26
CPSF1-201ENST00000526271 H0YIG0 161 aa13.43□□□□□ -0.26
CPSF1-201ENST00000526271 KIF5CO60282 957 aa13.43□□□□□ -0.26
CPSF1-201ENST00000526271 VPS26AO75436 327 aa13.43□□□□□ -0.26
CPSF1-201ENST00000526271 RDH16O75452 317 aa13.43□□□□□ -0.26
CPSF1-201ENST00000526271 ANXA5P08758 320 aa13.43□□□□□ -0.26
CPSF1-201ENST00000526271 CHRM3P20309 590 aa13.43□□□□□ -0.26
CPSF1-201ENST00000526271 OGNP20774 298 aaKnown RBP13.43□□□□□ -0.26
CPSF1-201ENST00000526271 AGAP20933 346 aa13.43□□□□□ -0.26
CPSF1-201ENST00000526271 XCR1P46094 333 aa13.43□□□□□ -0.26
CPSF1-201ENST00000526271 NPY2RP49146 381 aa13.43□□□□□ -0.26
CPSF1-201ENST00000526271 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.43□□□□□ -0.26
CPSF1-201ENST00000526271 DRICH1Q6PGQ1 229 aaPredicted RBP13.43□□□□□ -0.26
CPSF1-201ENST00000526271 PIWIL4Q7Z3Z4 852 aaKnown RBP13.43□□□□□ -0.26
CPSF1-201ENST00000526271 GALNTL5Q7Z4T8 443 aa13.43□□□□□ -0.26
CPSF1-201ENST00000526271 DOLPP1Q86YN1 238 aa13.43□□□□□ -0.26
CPSF1-201ENST00000526271 RAB42Q8N4Z0 105 aa13.43□□□□□ -0.26
CPSF1-201ENST00000526271 CD200R1Q8TD46 325 aa13.43□□□□□ -0.26
CPSF1-201ENST00000526271 MAGEC3Q8TD91 643 aa13.43□□□□□ -0.26
CPSF1-201ENST00000526271 FRMD8P1Q9BZ68 369 aaPredicted RBP13.43□□□□□ -0.26
CPSF1-201ENST00000526271 JRKLQ9Y4A0 524 aa13.43□□□□□ -0.26
CPSF1-201ENST00000526271 MRFAP1Q9Y605 127 aa13.43□□□□□ -0.26
CPSF1-201ENST00000526271 DNHD1Q96M86 4753 aa13.42□□□□□ -0.26
CPSF1-201ENST00000526271 KCNE1BA0A087WTH5 132 aa13.42□□□□□ -0.26
CPSF1-201ENST00000526271 ZCWPW2A0A1B0GU75 182 aa13.42□□□□□ -0.26
CPSF1-201ENST00000526271 FAM227AF5H4B4 570 aa13.42□□□□□ -0.26
CPSF1-201ENST00000526271 PRPF4O43172 522 aaKnown RBP eCLIP13.42□□□□□ -0.26
CPSF1-201ENST00000526271 CLDN14O95500 239 aa13.42□□□□□ -0.26
CPSF1-201ENST00000526271 BASP1P80723 227 aaKnown RBP13.42□□□□□ -0.26
CPSF1-201ENST00000526271 CTBP1Q13363 440 aa13.42□□□□□ -0.26
CPSF1-201ENST00000526271 CCNG2Q16589 344 aa13.42□□□□□ -0.26
CPSF1-201ENST00000526271 MINDY4Q4G0A6 757 aa13.42□□□□□ -0.26
CPSF1-201ENST00000526271 PAPD4Q6PIY7 484 aaKnown RBP13.42□□□□□ -0.26
CPSF1-201ENST00000526271 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.42□□□□□ -0.26
CPSF1-201ENST00000526271 PCGF5Q86SE9 256 aa13.42□□□□□ -0.26
CPSF1-201ENST00000526271 SLC35F6Q8N357 371 aa13.42□□□□□ -0.26
CPSF1-201ENST00000526271 GSDMBQ8TAX9 411 aa13.42□□□□□ -0.26
CPSF1-201ENST00000526271 ZCCHC10Q8TBK6 192 aa13.42□□□□□ -0.26
CPSF1-201ENST00000526271 KCNK13Q9HB14 408 aa13.42□□□□□ -0.26
CPSF1-201ENST00000526271 MMP25Q9NPA2 562 aa13.42□□□□□ -0.26
CPSF1-201ENST00000526271 FBXO6Q9NRD1 293 aaPredicted RBP13.42□□□□□ -0.26
CPSF1-201ENST00000526271 DRG1Q9Y295 367 aaKnown RBP13.42□□□□□ -0.26
CPSF1-201ENST00000526271 PRRC2AP48634 2157 aaKnown RBP13.42□□□□□ -0.26
CPSF1-201ENST00000526271 VPS13CQ709C8 3753 aa13.42□□□□□ -0.26
CPSF1-201ENST00000526271 PHF3Q92576 2039 aaKnown RBP13.41□□□□□ -0.26
CPSF1-201ENST00000526271 GABRR3A8MPY1 467 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 ASNA1O43681 348 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 CDC123O75794 336 aaPredicted RBP13.41□□□□□ -0.26
CPSF1-201ENST00000526271 CATP04040 527 aaKnown RBP13.41□□□□□ -0.26
CPSF1-201ENST00000526271 ICAM2P13598 275 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 IGFBP2P18065 325 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 TPSB2P20231 275 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 PTGER1P34995 402 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 PGGT1BP53609 377 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 TERF1P54274 439 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 TBPL1P62380 186 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 ABATP80404 500 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 USP10Q14694 798 aaKnown RBP13.41□□□□□ -0.26
CPSF1-201ENST00000526271 NAA25Q14CX7 972 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 RPS6KA1Q15418 735 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 TPSAB1Q15661 275 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 SFT2D3Q587I9 215 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 MRNIPQ6NTE8 343 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 NEPROQ6NW34 567 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 ADCK2Q7Z695 626 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 SLC26A11Q86WA9 606 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 CPNE9Q8IYJ1 553 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 RPRMLQ8N4K4 120 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 AFAP1L2Q8N4X5 818 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 CPSF7Q8N684 471 aaKnown RBP13.41□□□□□ -0.26
CPSF1-201ENST00000526271 OTUD6BQ8N6M0 293 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 CCDC89Q8N998 374 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 PLPP5Q8NEB5 264 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 ELP5Q8TE02 316 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 AGAP11Q8TF27 550 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 RERGQ96A58 199 aaPredicted RBP13.41□□□□□ -0.26
CPSF1-201ENST00000526271 C14orf79Q96F83 325 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 ZNF354BQ96LW1 612 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 TCF12Q99081 682 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 GPR21Q99679 349 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 AICDAQ9GZX7 198 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 SPNS1Q9H2V7 528 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 NPDC1Q9NQX5 325 aaPredicted RBP13.41□□□□□ -0.26
CPSF1-201ENST00000526271 BFARQ9NZS9 450 aa13.41□□□□□ -0.26
CPSF1-201ENST00000526271 C4orf51C9J302 202 aa13.4□□□□□ -0.26
CPSF1-201ENST00000526271 H3BMM5 538 aa13.4□□□□□ -0.26
CPSF1-201ENST00000526271 SYF2O95926 243 aaKnown RBP13.4□□□□□ -0.26
CPSF1-201ENST00000526271 SP1P08047 785 aa13.4□□□□□ -0.26
CPSF1-201ENST00000526271 CYC1P08574 325 aa13.4□□□□□ -0.26
CPSF1-201ENST00000526271 MPC1LP0DKB6 136 aa13.4□□□□□ -0.26
CPSF1-201ENST00000526271 MAGEA6P43360 314 aa13.4□□□□□ -0.26
CPSF1-201ENST00000526271 AVPR1BP47901 424 aa13.4□□□□□ -0.26
CPSF1-201ENST00000526271 SLC26A5P58743 744 aa13.4□□□□□ -0.26
CPSF1-201ENST00000526271 GNG11P61952 73 aa13.4□□□□□ -0.26
CPSF1-201ENST00000526271 OLR1P78380 273 aa13.4□□□□□ -0.26
CPSF1-201ENST00000526271 MPP1Q00013 466 aa13.4□□□□□ -0.26
CPSF1-201ENST00000526271 ALDH6A1Q02252 535 aaKnown RBP13.4□□□□□ -0.26
CPSF1-201ENST00000526271 TFF3Q07654 80 aa13.4□□□□□ -0.26
CPSF1-201ENST00000526271 PTK6Q13882 451 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms