RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 FRMPD1Q5SYB0 1578 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 A0A1W2PPV4 95 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 TMEM8BA6NDV4 472 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 TMEM247A6NEH6 219 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 NEMP2A6NFY4 417 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 CYP26A1O43174 497 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 PSMD3O43242 534 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 PAX4O43316 350 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 PEX1O43933 1283 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 NME2P1O60361 137 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 PRAF2O60831 178 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 CABYRO75952 493 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 MYO1DO94832 1006 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 HLA-DQA2P01906 255 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 MBP02144 154 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 MBPP02686 304 aaPredicted RBP4.27□□□□□ -1.73
CD44-213ENST00000525209 CA3P07451 260 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 PLEKP08567 350 aaPredicted RBP4.27□□□□□ -1.73
CD44-213ENST00000525209 AKR1A1P14550 325 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 CPA3P15088 417 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 UGT1A1P22309 533 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 DUSP1P28562 367 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 LCN1P31025 176 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 MAP2K2P36507 400 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 FDFT1P37268 417 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 ARL4AP40617 200 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 NAMPTP43490 491 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 NUMBP49757 651 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 RGS19P49795 217 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 MEOX1P50221 254 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 RAB9AP51151 201 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 BCAP31P51572 246 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 CCR4P51679 360 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 MTCP1P56278 107 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 TSPAN5P62079 268 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 SLC25A3Q00325 362 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 TRAF1Q13077 416 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 GPR176Q14439 515 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 CPSF6Q16630 551 aaKnown RBP eCLIP4.27□□□□□ -1.73
CD44-213ENST00000525209 PNLIPRP3Q17RR3 467 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 HKDC1Q2TB90 917 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 CCDC14Q49A88 953 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 PCID2Q5JVF3 399 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 LCN1P1Q5VSP4 162 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 AGAP6Q5VW22 663 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 RAET1LQ5VY80 246 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 HIST2H2BCQ6DN03 193 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 HIST2H2BDQ6DRA6 164 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 ZSCAN25Q6NSZ9 544 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 TRIM65Q6PJ69 517 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 ZC3H14Q6PJT7 736 aaKnown RBP4.27□□□□□ -1.73
CD44-213ENST00000525209 FIGLAQ6QHK4 219 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 IRF2BP2Q7Z5L9 587 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 VPS36Q86VN1 386 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 ZC3HC1Q86WB0 502 aaKnown RBP4.27□□□□□ -1.73
CD44-213ENST00000525209 LRRC6Q86X45 466 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 MEX3DQ86XN8 651 aaKnown RBP4.27□□□□□ -1.73
CD44-213ENST00000525209 EXD3Q8N9H8 876 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 BOLLQ8N9W6 283 aaKnown RBP4.27□□□□□ -1.73
CD44-213ENST00000525209 SIDT2Q8NBJ9 832 aaKnown RBP4.27□□□□□ -1.73
CD44-213ENST00000525209 MCPH1Q8NEM0 835 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 OR5D13Q8NGL4 314 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 ZNF596Q8TC21 504 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 LRRC20Q8TCA0 184 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 PNPT1Q8TCS8 783 aaKnown RBP4.27□□□□□ -1.73
CD44-213ENST00000525209 GPX8Q8TED1 209 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 ZCCHC14Q8WYQ9 949 aaKnown RBP4.27□□□□□ -1.73
CD44-213ENST00000525209 TFAP2CQ92754 450 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 TNFRSF14Q92956 283 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 MOB3AQ96BX8 217 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 COQ2Q96H96 371 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 LURAP1Q96LR2 239 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 SIGLEC11Q96RL6 698 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 DCLRE1CQ96SD1 692 aaKnown RBP4.27□□□□□ -1.73
CD44-213ENST00000525209 HAUS8Q9BT25 410 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 MSTO1Q9BUK6 570 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 IDI2Q9BXS1 227 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 SLC6A15Q9H2J7 730 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 PIGMQ9H3S5 423 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 MAN2C1Q9NTJ4 1040 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 ABHD10Q9NUJ1 306 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 MRPL22Q9NWU5 206 aaKnown RBP4.27□□□□□ -1.73
CD44-213ENST00000525209 SMARCAL1Q9NZC9 954 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 FLRT1Q9NZU1 646 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 TBC1D24Q9ULP9 559 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 FOXJ3Q9UPW0 622 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 RNF24Q9Y225 148 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 NCKAP1Q9Y2A7 1128 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 OR10H1Q9Y4A9 318 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 HCFC2Q9Y5Z7 792 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 TTC37Q6PGP7 1564 aa4.27□□□□□ -1.73
CD44-213ENST00000525209 SIGLEC1Q9BZZ2 1709 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 CLTCQ00610 1675 aaKnown RBP4.26□□□□□ -1.73
CD44-213ENST00000525209 ANKUB1A6NFN9 424 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 CD8B2A6NJW9 211 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 MATN2O00339 956 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 NR5A2O00482 541 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 PDXKO00764 312 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 ABLIM1O14639 778 aa4.26□□□□□ -1.73
CD44-213ENST00000525209 ARPC3O15145 178 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms