RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 UTP11Q9Y3A2 253 aaKnown RBP17.58■□□□□ 0.4
CAPN1-203ENST00000525013 EIF3HO15372 352 aaKnown RBP eCLIP17.57■□□□□ 0.4
CAPN1-203ENST00000525013 JRKO75564 520 aa17.57■□□□□ 0.4
CAPN1-203ENST00000525013 UQCRHP07919 91 aa17.57■□□□□ 0.4
CAPN1-203ENST00000525013 GLRBP48167 497 aa17.57■□□□□ 0.4
CAPN1-203ENST00000525013 CBLBQ13191 982 aa17.57■□□□□ 0.4
CAPN1-203ENST00000525013 MINDY4Q4G0A6 757 aa17.57■□□□□ 0.4
CAPN1-203ENST00000525013 CATSPEREQ5SY80 951 aa17.57■□□□□ 0.4
CAPN1-203ENST00000525013 ISLR2Q6UXK2 745 aa17.57■□□□□ 0.4
CAPN1-203ENST00000525013 Q6ZS92 163 aa17.57■□□□□ 0.4
CAPN1-203ENST00000525013 FRA10AC1Q70Z53 315 aa17.57■□□□□ 0.4
CAPN1-203ENST00000525013 CUZD1Q86UP6 607 aa17.57■□□□□ 0.4
CAPN1-203ENST00000525013 CEP97Q8IW35 865 aa17.57■□□□□ 0.4
CAPN1-203ENST00000525013 OR51Q1Q8NH59 317 aa17.57■□□□□ 0.4
CAPN1-203ENST00000525013 DNAJB14Q8TBM8 379 aa17.57■□□□□ 0.4
CAPN1-203ENST00000525013 SLC5A11Q8WWX8 675 aa17.57■□□□□ 0.4
CAPN1-203ENST00000525013 METTL21AQ8WXB1 218 aa17.57■□□□□ 0.4
CAPN1-203ENST00000525013 CDKL2Q92772 493 aa17.57■□□□□ 0.4
CAPN1-203ENST00000525013 NEIL2Q969S2 332 aa17.57■□□□□ 0.4
CAPN1-203ENST00000525013 SNRNP40Q96DI7 357 aaKnown RBP17.57■□□□□ 0.4
CAPN1-203ENST00000525013 CNDP1Q96KN2 507 aa17.57■□□□□ 0.4
CAPN1-203ENST00000525013 GPAMQ9HCL2 828 aa17.57■□□□□ 0.4
CAPN1-203ENST00000525013 ASF1BQ9NVP2 202 aa17.57■□□□□ 0.4
CAPN1-203ENST00000525013 GRHL1Q9NZI5 618 aa17.57■□□□□ 0.4
CAPN1-203ENST00000525013 CTNNAL1Q9UBT7 734 aa17.57■□□□□ 0.4
CAPN1-203ENST00000525013 DYRK1BQ9Y463 629 aa17.57■□□□□ 0.4
CAPN1-203ENST00000525013 CSAG2Q9Y5P2 127 aa17.57■□□□□ 0.4
CAPN1-203ENST00000525013 UTP20O75691 2785 aaKnown RBP17.57■□□□□ 0.4
CAPN1-203ENST00000525013 IGHV1-45A0A0A0MS14 117 aa17.56■□□□□ 0.4
CAPN1-203ENST00000525013 TRBC2A0A5B9 178 aa17.56■□□□□ 0.4
CAPN1-203ENST00000525013 CLEC18AA5D8T8 446 aa17.56■□□□□ 0.4
CAPN1-203ENST00000525013 TCP11X1B4DZS4 312 aa17.56■□□□□ 0.4
CAPN1-203ENST00000525013 PCDH17O14917 1159 aa17.56■□□□□ 0.4
CAPN1-203ENST00000525013 NDUFS4O43181 175 aa17.56■□□□□ 0.4
CAPN1-203ENST00000525013 RDH16O75452 317 aa17.56■□□□□ 0.4
CAPN1-203ENST00000525013 KLHL18O94889 574 aa17.56■□□□□ 0.4
CAPN1-203ENST00000525013 C8orf89P0DMQ9 161 aa17.56■□□□□ 0.4
CAPN1-203ENST00000525013 XCR1P46094 333 aa17.56■□□□□ 0.4
CAPN1-203ENST00000525013 PLTPP55058 493 aa17.56■□□□□ 0.4
CAPN1-203ENST00000525013 SRSF1Q07955 248 aaKnown RBP eCLIP17.56■□□□□ 0.4
CAPN1-203ENST00000525013 PPP1R3AQ16821 1122 aa17.56■□□□□ 0.4
CAPN1-203ENST00000525013 CLEC18BQ6UXF7 455 aa17.56■□□□□ 0.4
CAPN1-203ENST00000525013 C3orf62Q6ZUJ4 267 aa17.56■□□□□ 0.4
CAPN1-203ENST00000525013 THOC6Q86W42 341 aaKnown RBP17.56■□□□□ 0.4
CAPN1-203ENST00000525013 CCDC25Q86WR0 208 aa17.56■□□□□ 0.4
CAPN1-203ENST00000525013 CLEC18CQ8NCF0 446 aa17.56■□□□□ 0.4
CAPN1-203ENST00000525013 ZNF740Q8NDX6 193 aa17.56■□□□□ 0.4
CAPN1-203ENST00000525013 OR4K1Q8NGD4 311 aa17.56■□□□□ 0.4
CAPN1-203ENST00000525013 PPP4R1Q8TF05 950 aa17.56■□□□□ 0.4
CAPN1-203ENST00000525013 ANKRD49Q8WVL7 239 aa17.56■□□□□ 0.4
CAPN1-203ENST00000525013 ANKRD7Q92527 254 aa17.56■□□□□ 0.4
CAPN1-203ENST00000525013 UNKQ9C0B0 810 aaKnown RBP17.56■□□□□ 0.4
CAPN1-203ENST00000525013 VN1R1Q9GZP7 353 aa17.56■□□□□ 0.4
CAPN1-203ENST00000525013 RAB17Q9H0T7 212 aa17.56■□□□□ 0.4
CAPN1-203ENST00000525013 RIC8BQ9NVN3 520 aa17.56■□□□□ 0.4
CAPN1-203ENST00000525013 PTGFRNQ9P2B2 879 aa17.56■□□□□ 0.4
CAPN1-203ENST00000525013 MTO1Q9Y2Z2 717 aaKnown RBP17.56■□□□□ 0.4
CAPN1-203ENST00000525013 NAALAD2Q9Y3Q0 740 aa17.56■□□□□ 0.4
CAPN1-203ENST00000525013 COPG1Q9Y678 874 aaKnown RBP17.56■□□□□ 0.4
CAPN1-203ENST00000525013 NAV2Q8IVL1 2488 aa17.56■□□□□ 0.4
CAPN1-203ENST00000525013 ICE1Q9Y2F5 2266 aa17.55■□□□□ 0.4
CAPN1-203ENST00000525013 TCRBV9S1A1TA0A576 114 aa17.55■□□□□ 0.4
CAPN1-203ENST00000525013 ZNF860A6NHJ4 632 aa17.55■□□□□ 0.4
CAPN1-203ENST00000525013 CXorf49A8MYA2 514 aaPredicted RBP17.55■□□□□ 0.4
CAPN1-203ENST00000525013 PRR35P0CG20 571 aa17.55■□□□□ 0.4
CAPN1-203ENST00000525013 POU4F1Q01851 419 aa17.55■□□□□ 0.4
CAPN1-203ENST00000525013 ILF2Q12905 390 aaKnown RBP17.55■□□□□ 0.4
CAPN1-203ENST00000525013 MFAP5Q13361 173 aa17.55■□□□□ 0.4
CAPN1-203ENST00000525013 USP10Q14694 798 aaKnown RBP17.55■□□□□ 0.4
CAPN1-203ENST00000525013 TSNQ15631 228 aaKnown RBP17.55■□□□□ 0.4
CAPN1-203ENST00000525013 FHL5Q5TD97 284 aa17.55■□□□□ 0.4
CAPN1-203ENST00000525013 IGFL2Q6UWQ7 119 aa17.55■□□□□ 0.4
CAPN1-203ENST00000525013 ADAMTSL2Q86TH1 951 aa17.55■□□□□ 0.4
CAPN1-203ENST00000525013 ZGRF1Q86YA3 2104 aa17.55■□□□□ 0.4
CAPN1-203ENST00000525013 CTAGE3PQ8IX95 158 aa17.55■□□□□ 0.4
CAPN1-203ENST00000525013 SHISA5Q8N114 240 aa17.55■□□□□ 0.4
CAPN1-203ENST00000525013 BRIX1Q8TDN6 353 aaKnown RBP17.55■□□□□ 0.4
CAPN1-203ENST00000525013 MOCOSQ96EN8 888 aa17.55■□□□□ 0.4
CAPN1-203ENST00000525013 TSPAN17Q96FV3 270 aa17.55■□□□□ 0.4
CAPN1-203ENST00000525013 LMF1Q96S06 567 aa17.55■□□□□ 0.4
CAPN1-203ENST00000525013 CPNE1Q99829 537 aa17.55■□□□□ 0.4
CAPN1-203ENST00000525013 ZNF700Q9H0M5 742 aa17.55■□□□□ 0.4
CAPN1-203ENST00000525013 CAB39LQ9H9S4 337 aa17.55■□□□□ 0.4
CAPN1-203ENST00000525013 SLC22A14Q9Y267 594 aa17.55■□□□□ 0.4
CAPN1-203ENST00000525013 OARD1Q9Y530 152 aa17.55■□□□□ 0.4
CAPN1-203ENST00000525013 PCDHGA10Q9Y5H3 936 aa17.55■□□□□ 0.4
CAPN1-203ENST00000525013 SLC22A7Q9Y694 548 aa17.55■□□□□ 0.4
CAPN1-203ENST00000525013 LOC102723996A0A087X1L8 192 aa17.54■□□□□ 0.4
CAPN1-203ENST00000525013 A0A1W2PQ72 361 aa17.54■□□□□ 0.4
CAPN1-203ENST00000525013 OR2W5A6NFC9 320 aa17.54■□□□□ 0.4
CAPN1-203ENST00000525013 WFS1O76024 890 aa17.54■□□□□ 0.4
CAPN1-203ENST00000525013 AGFG2O95081 481 aa17.54■□□□□ 0.4
CAPN1-203ENST00000525013 SERPINA7P05543 415 aa17.54■□□□□ 0.4
CAPN1-203ENST00000525013 CELA2AP08217 269 aa17.54■□□□□ 0.4
CAPN1-203ENST00000525013 CAV1Q03135 178 aa17.54■□□□□ 0.4
CAPN1-203ENST00000525013 RGS1Q08116 209 aa17.54■□□□□ 0.4
CAPN1-203ENST00000525013 MRPL49Q13405 166 aaKnown RBP17.54■□□□□ 0.4
CAPN1-203ENST00000525013 HERC3Q15034 1050 aa17.54■□□□□ 0.4
CAPN1-203ENST00000525013 EIF2S3LQ2VIR3 472 aaKnown RBP17.54■□□□□ 0.4
CAPN1-203ENST00000525013 CRB2Q5IJ48 1285 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms