RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 EZRP15311 586 aaKnown RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 CHN1P15882 459 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 ATP5F1P24539 256 aaPredicted RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 HNRNPH1P31943 449 aaKnown RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 ARRB2P32121 409 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 HPDP32754 393 aaPredicted RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 GRK3P35626 688 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 DLSTP36957 453 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 SCTRP47872 440 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 CCNG1P51959 295 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 PLA2G16P53816 162 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 PRKAA2P54646 552 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 FOXA1P55317 472 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 ERVPABLB-1P60509 514 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 RPS15AP62244 130 aaKnown RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 RPS13P62277 151 aaKnown RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 HERVK_113P63132 956 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 BTN3A2P78410 334 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 CLCQ05315 142 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 HYAL2Q12891 473 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 TRAF3Q13114 568 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 GRM7Q14831 915 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 RASA2Q15283 850 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 ZRSR2Q15696 482 aaKnown RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 PRTGQ2VWP7 1150 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 CCDC153Q494R4 210 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 DEFB134Q4QY38 66 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 TTMPQ5BVD1 217 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 VWA2Q5GFL6 755 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 ARHGAP40Q5TG30 622 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 ATG9BQ674R7 924 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 TTC19Q6DKK2 380 aaPredicted RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 CLEC6AQ6EIG7 209 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 FAAH2Q6GMR7 532 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 LETMD1Q6P1Q0 360 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 TMIGD1Q6UXZ0 262 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 COX15Q7KZN9 410 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 HDXQ7Z353 690 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 CCDC91Q7Z6B0 441 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 MILR1Q7Z6M3 343 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 ASPGQ86U10 573 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 PROSER1Q86XN7 944 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 DTX1Q86Y01 620 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 PDSS2Q86YH6 399 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 KLHDC8AQ8IYD2 350 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 NLGN4XQ8N0W4 816 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 LSMEM2Q8N112 164 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 TCAIMQ8N3R3 496 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 RIBC1Q8N443 379 aaPredicted RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 ENDOVQ8N8Q3 282 aaKnown RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 CDYL2Q8N8U2 506 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 AMER3Q8N944 861 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 TTC29Q8NA56 475 aaPredicted RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 MFSD9Q8NBP5 474 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 NLGN4YQ8NFZ3 816 aaPredicted RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 OR4K1Q8NGD4 311 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 CREB3L4Q8TEY5 395 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 ZNF483Q8TF39 744 aaPredicted RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 UBTD2Q8WUN7 234 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 SREK1Q8WXA9 508 aaKnown RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 UCN3Q969E3 161 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 COL26A1Q96A83 441 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 PTCD3Q96EY7 689 aaKnown RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 MMABQ96EY8 250 aaPredicted RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 PPP1R36Q96LQ0 422 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 AIF1LQ9BQI0 150 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 GATA5Q9BWX5 397 aaPredicted RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 ERVK-6Q9BXR3 956 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 ASPSCR1Q9BZE9 553 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 PCBD2Q9H0N5 130 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 GSTO2Q9H4Y5 243 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 SOX17Q9H6I2 414 aaPredicted RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 GPN2Q9H9Y4 310 aaPredicted RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 PPCSQ9HAB8 311 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 PELI2Q9HAT8 420 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 LHX9Q9NQ69 397 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 SLC22A11Q9NSA0 550 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 TXLNGQ9NUQ3 528 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 ARGLU1Q9NWB6 273 aaPredicted RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 IFT80Q9P2H3 777 aaPredicted RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 ANKMY1Q9P2S6 941 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 COPG2Q9UBF2 871 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 CTSFQ9UBX1 484 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 ZNF225Q9UK10 706 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 RALYQ9UKM9 306 aaKnown RBP4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 PCDHGA7Q9Y5G6 932 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 PCDHGA3Q9Y5H0 932 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 KLK4Q9Y5K2 254 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 PTGDR2Q9Y5Y4 395 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 AP1M2Q9Y6Q5 423 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 RP1P56715 2156 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 ASXL3Q9C0F0 2248 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 CABIN1Q9Y6J0 2220 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 AKAP13Q12802 2813 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 PTPRBP23467 1997 aa4.38□□□□□ -1.71
CHMP4A-202ENST00000524955 ADAMTS20P59510 1910 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 FRYQ5TBA9 3013 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 ZFC3H1O60293 1989 aaKnown RBP4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 KCNE1BA0A087WTH5 132 aa4.37□□□□□ -1.71
CHMP4A-202ENST00000524955 A0A1B0GX78 115 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms