RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 CASC4Q6P4E1 433 aa24.41■■□□□ 1.5
PVT1-219ENST00000523427 MEX3BQ6ZN04 569 aaKnown RBP24.41■■□□□ 1.5
PVT1-219ENST00000523427 LRRC56Q8IYG6 542 aaPredicted RBP24.41■■□□□ 1.5
PVT1-219ENST00000523427 SLC5A8Q8N695 610 aa24.41■■□□□ 1.5
PVT1-219ENST00000523427 KCT2Q8NC54 265 aa24.41■■□□□ 1.5
PVT1-219ENST00000523427 GIMAP7Q8NHV1 300 aa24.41■■□□□ 1.5
PVT1-219ENST00000523427 M1APQ8TC57 530 aa24.41■■□□□ 1.5
PVT1-219ENST00000523427 SDCCAG3Q96C92 435 aa24.41■■□□□ 1.5
PVT1-219ENST00000523427 PEX11GQ96HA9 241 aa24.41■■□□□ 1.5
PVT1-219ENST00000523427 LPAR4Q99677 370 aa24.41■■□□□ 1.5
PVT1-219ENST00000523427 TMEM184CQ9NVA4 438 aa24.41■■□□□ 1.5
PVT1-219ENST00000523427 LRFN1Q9P244 771 aa24.41■■□□□ 1.5
PVT1-219ENST00000523427 SOX13Q9UN79 622 aa24.41■■□□□ 1.5
PVT1-219ENST00000523427 TCRBV7S3A2A0A539 114 aa24.4■■□□□ 1.5
PVT1-219ENST00000523427 FEZF1A0PJY2 475 aa24.4■■□□□ 1.5
PVT1-219ENST00000523427 ASPDHA6ND91 283 aa24.4■■□□□ 1.5
PVT1-219ENST00000523427 AP3B1O00203 1094 aa24.4■■□□□ 1.5
PVT1-219ENST00000523427 ZBTB14O43829 449 aa24.4■■□□□ 1.5
PVT1-219ENST00000523427 AVILO75366 819 aa24.4■■□□□ 1.5
PVT1-219ENST00000523427 OGNP20774 298 aaKnown RBP24.4■■□□□ 1.5
PVT1-219ENST00000523427 COILP38432 576 aaPredicted RBP24.4■■□□□ 1.5
PVT1-219ENST00000523427 ADARP55265 1226 aaKnown RBP24.4■■□□□ 1.5
PVT1-219ENST00000523427 TAS2R50P59544 299 aa24.4■■□□□ 1.5
PVT1-219ENST00000523427 RPS15AP62244 130 aaKnown RBP24.4■■□□□ 1.5
PVT1-219ENST00000523427 ABRAXAS2Q15018 415 aa24.4■■□□□ 1.5
PVT1-219ENST00000523427 DOLPP1Q86YN1 238 aa24.4■■□□□ 1.5
PVT1-219ENST00000523427 TXLNBQ8N3L3 684 aa24.4■■□□□ 1.5
PVT1-219ENST00000523427 CA5BP1Q8WTZ4 195 aa24.4■■□□□ 1.5
PVT1-219ENST00000523427 ASB11Q8WXH4 323 aa24.4■■□□□ 1.5
PVT1-219ENST00000523427 TSLPQ969D9 159 aa24.4■■□□□ 1.5
PVT1-219ENST00000523427 MMP25Q9NPA2 562 aa24.4■■□□□ 1.5
PVT1-219ENST00000523427 PPT2Q9UMR5 302 aa24.4■■□□□ 1.5
PVT1-219ENST00000523427 NEU2Q9Y3R4 380 aa24.4■■□□□ 1.5
PVT1-219ENST00000523427 NDC80O14777 642 aa24.39■■□□□ 1.49
PVT1-219ENST00000523427 IMPA1P29218 277 aa24.39■■□□□ 1.49
PVT1-219ENST00000523427 KCNJ1P48048 391 aa24.39■■□□□ 1.49
PVT1-219ENST00000523427 CSNK1G2P78368 415 aa24.39■■□□□ 1.49
PVT1-219ENST00000523427 ZNF468Q5VIY5 522 aaPredicted RBP24.39■■□□□ 1.49
PVT1-219ENST00000523427 ZNF470Q6ECI4 717 aa24.39■■□□□ 1.49
PVT1-219ENST00000523427 KIAA0930Q6ICG6 404 aaPredicted RBP24.39■■□□□ 1.49
PVT1-219ENST00000523427 TMEM214Q6NUQ4 689 aaKnown RBP24.39■■□□□ 1.49
PVT1-219ENST00000523427 PDSS2Q86YH6 399 aa24.39■■□□□ 1.49
PVT1-219ENST00000523427 CILP2Q8IUL8 1156 aa24.39■■□□□ 1.49
PVT1-219ENST00000523427 SIAH3Q8IW03 269 aa24.39■■□□□ 1.49
PVT1-219ENST00000523427 GHDCQ8N2G8 530 aa24.39■■□□□ 1.49
PVT1-219ENST00000523427 HORMAD2Q8N7B1 307 aa24.39■■□□□ 1.49
PVT1-219ENST00000523427 TRIM51Q9BSJ1 452 aa24.39■■□□□ 1.49
PVT1-219ENST00000523427 TSGA10Q9BZW7 698 aa24.39■■□□□ 1.49
PVT1-219ENST00000523427 CCDC68Q9H2F9 335 aa24.39■■□□□ 1.49
PVT1-219ENST00000523427 CCDC177Q9NQR7 707 aaPredicted RBP24.39■■□□□ 1.49
PVT1-219ENST00000523427 FBXO6Q9NRD1 293 aaPredicted RBP24.39■■□□□ 1.49
PVT1-219ENST00000523427 NAALAD2Q9Y3Q0 740 aa24.39■■□□□ 1.49
PVT1-219ENST00000523427 GTF3C1Q12789 2109 aa24.38■■□□□ 1.49
PVT1-219ENST00000523427 NEURL1O76050 574 aa24.38■■□□□ 1.49
PVT1-219ENST00000523427 ZNF24P17028 368 aa24.38■■□□□ 1.49
PVT1-219ENST00000523427 CAPN3P20807 821 aa24.38■■□□□ 1.49
PVT1-219ENST00000523427 OR4D2P58180 307 aa24.38■■□□□ 1.49
PVT1-219ENST00000523427 CCNG2Q16589 344 aa24.38■■□□□ 1.49
PVT1-219ENST00000523427 RNFT1Q5M7Z0 435 aa24.38■■□□□ 1.49
PVT1-219ENST00000523427 UBE2R2Q712K3 238 aaPredicted RBP24.38■■□□□ 1.49
PVT1-219ENST00000523427 PIWIL4Q7Z3Z4 852 aaKnown RBP24.38■■□□□ 1.49
PVT1-219ENST00000523427 SLC26A11Q86WA9 606 aa24.38■■□□□ 1.49
PVT1-219ENST00000523427 CYP4X1Q8N118 509 aa24.38■■□□□ 1.49
PVT1-219ENST00000523427 KIF2BQ8N4N8 673 aa24.38■■□□□ 1.49
PVT1-219ENST00000523427 CPSF7Q8N684 471 aaKnown RBP24.38■■□□□ 1.49
PVT1-219ENST00000523427 CAMKVQ8NCB2 501 aa24.38■■□□□ 1.49
PVT1-219ENST00000523427 OR5T3Q8NGG3 340 aa24.38■■□□□ 1.49
PVT1-219ENST00000523427 C14orf79Q96F83 325 aa24.38■■□□□ 1.49
PVT1-219ENST00000523427 SPOCK3Q9BQ16 436 aa24.38■■□□□ 1.49
PVT1-219ENST00000523427 SH2B3Q9UQQ2 575 aa24.38■■□□□ 1.49
PVT1-219ENST00000523427 PRRG2O14669 202 aa24.37■■□□□ 1.49
PVT1-219ENST00000523427 TSPAN12O95859 305 aa24.37■■□□□ 1.49
PVT1-219ENST00000523427 CYC1P08574 325 aa24.37■■□□□ 1.49
PVT1-219ENST00000523427 MPC1LP0DKB6 136 aa24.37■■□□□ 1.49
PVT1-219ENST00000523427 PAMP19021 973 aa24.37■■□□□ 1.49
PVT1-219ENST00000523427 VPS41P49754 854 aa24.37■■□□□ 1.49
PVT1-219ENST00000523427 TBPL1P62380 186 aa24.37■■□□□ 1.49
PVT1-219ENST00000523427 CTBP1Q13363 440 aa24.37■■□□□ 1.49
PVT1-219ENST00000523427 USP10Q14694 798 aaKnown RBP24.37■■□□□ 1.49
PVT1-219ENST00000523427 SIX1Q15475 284 aaPredicted RBP24.37■■□□□ 1.49
PVT1-219ENST00000523427 TESK1Q15569 626 aa24.37■■□□□ 1.49
PVT1-219ENST00000523427 TRIP13Q15645 432 aaPredicted RBP24.37■■□□□ 1.49
PVT1-219ENST00000523427 ASPGQ86U10 573 aa24.37■■□□□ 1.49
PVT1-219ENST00000523427 RPS19BP1Q86WX3 136 aaKnown RBP24.37■■□□□ 1.49
PVT1-219ENST00000523427 DENND6AQ8IWF6 608 aa24.37■■□□□ 1.49
PVT1-219ENST00000523427 CPNE9Q8IYJ1 553 aa24.37■■□□□ 1.49
PVT1-219ENST00000523427 FBXO15Q8NCQ5 510 aaPredicted RBP24.37■■□□□ 1.49
PVT1-219ENST00000523427 SLC13A3Q8WWT9 602 aa24.37■■□□□ 1.49
PVT1-219ENST00000523427 GPR21Q99679 349 aa24.37■■□□□ 1.49
PVT1-219ENST00000523427 MCCC2Q9HCC0 563 aa24.37■■□□□ 1.49
PVT1-219ENST00000523427 VPS9D1Q9Y2B5 631 aa24.37■■□□□ 1.49
PVT1-219ENST00000523427 KCNE1BA0A087WTH5 132 aa24.36■■□□□ 1.49
PVT1-219ENST00000523427 GFYI3L273 518 aa24.36■■□□□ 1.49
PVT1-219ENST00000523427 KIF5CO60282 957 aa24.36■■□□□ 1.49
PVT1-219ENST00000523427 LCMT2O60294 686 aaKnown RBP24.36■■□□□ 1.49
PVT1-219ENST00000523427 DIAPH2O60879 1101 aa24.36■■□□□ 1.49
PVT1-219ENST00000523427 SLC25A12O75746 678 aa24.36■■□□□ 1.49
PVT1-219ENST00000523427 SLC26A5P58743 744 aa24.36■■□□□ 1.49
PVT1-219ENST00000523427 RHAGQ02094 409 aa24.36■■□□□ 1.49
PVT1-219ENST00000523427 THOC5Q13769 683 aaKnown RBP24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms