RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 LONRF1Q17RB8 773 aa14.55□□□□□ -0.08
MRPS28-209ENST00000522987 SFT2D3Q587I9 215 aa14.55□□□□□ -0.08
MRPS28-209ENST00000522987 ACER2Q5QJU3 275 aa14.55□□□□□ -0.08
MRPS28-209ENST00000522987 RBM20Q5T481 1227 aaKnown RBP14.55□□□□□ -0.08
MRPS28-209ENST00000522987 AGTRAPQ6RW13 159 aa14.55□□□□□ -0.08
MRPS28-209ENST00000522987 C17orf64Q86WR6 236 aa14.55□□□□□ -0.08
MRPS28-209ENST00000522987 PYCR2Q96C36 320 aa14.55□□□□□ -0.08
MRPS28-209ENST00000522987 MOCOSQ96EN8 888 aa14.55□□□□□ -0.08
MRPS28-209ENST00000522987 ANKHQ9HCJ1 492 aa14.55□□□□□ -0.08
MRPS28-209ENST00000522987 TEKT2Q9UIF3 430 aa14.55□□□□□ -0.08
MRPS28-209ENST00000522987 TRMT6Q9UJA5 497 aaKnown RBP14.55□□□□□ -0.08
MRPS28-209ENST00000522987 NAALAD2Q9Y3Q0 740 aa14.55□□□□□ -0.08
MRPS28-209ENST00000522987 H0YIG0 161 aa14.54□□□□□ -0.08
MRPS28-209ENST00000522987 HTR1EP28566 365 aa14.54□□□□□ -0.08
MRPS28-209ENST00000522987 CA7P43166 264 aa14.54□□□□□ -0.08
MRPS28-209ENST00000522987 TIAL1Q01085 375 aaKnown RBP eCLIP14.54□□□□□ -0.08
MRPS28-209ENST00000522987 ACTN3Q08043 901 aaPredicted RBP14.54□□□□□ -0.08
MRPS28-209ENST00000522987 TUBA3CQ13748 450 aa14.54□□□□□ -0.08
MRPS28-209ENST00000522987 PHKG1Q16816 387 aa14.54□□□□□ -0.08
MRPS28-209ENST00000522987 SPINK14Q6IE38 97 aa14.54□□□□□ -0.08
MRPS28-209ENST00000522987 TMEM214Q6NUQ4 689 aaKnown RBP14.54□□□□□ -0.08
MRPS28-209ENST00000522987 TUBA3EQ6PEY2 450 aa14.54□□□□□ -0.08
MRPS28-209ENST00000522987 PAPD4Q6PIY7 484 aaKnown RBP14.54□□□□□ -0.08
MRPS28-209ENST00000522987 ASPGQ86U10 573 aa14.54□□□□□ -0.08
MRPS28-209ENST00000522987 TRIM58Q8NG06 486 aa14.54□□□□□ -0.08
MRPS28-209ENST00000522987 MCOLN3Q8TDD5 553 aa14.54□□□□□ -0.08
MRPS28-209ENST00000522987 SIGLEC10Q96LC7 697 aa14.54□□□□□ -0.08
MRPS28-209ENST00000522987 RNF32Q9H0A6 362 aa14.54□□□□□ -0.08
MRPS28-209ENST00000522987 XAB2Q9HCS7 855 aaKnown RBP14.54□□□□□ -0.08
MRPS28-209ENST00000522987 HOMER3Q9NSC5 361 aa14.54□□□□□ -0.08
MRPS28-209ENST00000522987 C19orf25Q9UFG5 118 aaPredicted RBP14.54□□□□□ -0.08
MRPS28-209ENST00000522987 NPIPA5E9PKD4 350 aa14.53□□□□□ -0.08
MRPS28-209ENST00000522987 TTI1O43156 1089 aa14.53□□□□□ -0.08
MRPS28-209ENST00000522987 SLC19A2O60779 497 aa14.53□□□□□ -0.08
MRPS28-209ENST00000522987 CD96P40200 585 aa14.53□□□□□ -0.08
MRPS28-209ENST00000522987 CDKN2DP55273 166 aa14.53□□□□□ -0.08
MRPS28-209ENST00000522987 AP2B1P63010 937 aa14.53□□□□□ -0.08
MRPS28-209ENST00000522987 ADORA2A-AS1P86434 159 aa14.53□□□□□ -0.08
MRPS28-209ENST00000522987 HSF1Q00613 529 aa14.53□□□□□ -0.08
MRPS28-209ENST00000522987 OC90Q02509 493 aaPredicted RBP14.53□□□□□ -0.08
MRPS28-209ENST00000522987 RBPJQ06330 500 aa14.53□□□□□ -0.08
MRPS28-209ENST00000522987 ABRAXAS2Q15018 415 aa14.53□□□□□ -0.08
MRPS28-209ENST00000522987 CDSNQ15517 529 aa14.53□□□□□ -0.08
MRPS28-209ENST00000522987 OR1C1Q15619 314 aa14.53□□□□□ -0.08
MRPS28-209ENST00000522987 PLAG1Q6DJT9 500 aa14.53□□□□□ -0.08
MRPS28-209ENST00000522987 CAPN13Q6MZZ7 669 aaPredicted RBP14.53□□□□□ -0.08
MRPS28-209ENST00000522987 CCDC137Q6PK04 289 aaKnown RBP14.53□□□□□ -0.08
MRPS28-209ENST00000522987 PAQR3Q6TCH7 311 aa14.53□□□□□ -0.08
MRPS28-209ENST00000522987 CYP4X1Q8N118 509 aa14.53□□□□□ -0.08
MRPS28-209ENST00000522987 KIF2BQ8N4N8 673 aa14.53□□□□□ -0.08
MRPS28-209ENST00000522987 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.53□□□□□ -0.08
MRPS28-209ENST00000522987 CAMKVQ8NCB2 501 aa14.53□□□□□ -0.08
MRPS28-209ENST00000522987 DNAJB8Q8NHS0 232 aa14.53□□□□□ -0.08
MRPS28-209ENST00000522987 SLC13A3Q8WWT9 602 aa14.53□□□□□ -0.08
MRPS28-209ENST00000522987 LINGO1Q96FE5 620 aa14.53□□□□□ -0.08
MRPS28-209ENST00000522987 ZNF354BQ96LW1 612 aa14.53□□□□□ -0.08
MRPS28-209ENST00000522987 PHF12Q96QT6 1004 aa14.53□□□□□ -0.08
MRPS28-209ENST00000522987 NPIPA1Q9UND3 350 aa14.53□□□□□ -0.08
MRPS28-209ENST00000522987 FBN2P35556 2912 aa14.52□□□□□ -0.08
MRPS28-209ENST00000522987 MAGEB16A2A368 324 aa14.52□□□□□ -0.09
MRPS28-209ENST00000522987 GABRR3A8MPY1 467 aa14.52□□□□□ -0.09
MRPS28-209ENST00000522987 OR1F1O43749 312 aa14.52□□□□□ -0.09
MRPS28-209ENST00000522987 B4GALT2O60909 372 aa14.52□□□□□ -0.09
MRPS28-209ENST00000522987 ESRRAP11474 423 aaPredicted RBP14.52□□□□□ -0.09
MRPS28-209ENST00000522987 MLNP12872 115 aa14.52□□□□□ -0.09
MRPS28-209ENST00000522987 HNF4AP41235 474 aa14.52□□□□□ -0.09
MRPS28-209ENST00000522987 OR4D2P58180 307 aa14.52□□□□□ -0.09
MRPS28-209ENST00000522987 ALDH6A1Q02252 535 aaKnown RBP14.52□□□□□ -0.09
MRPS28-209ENST00000522987 RELAQ04206 551 aa14.52□□□□□ -0.09
MRPS28-209ENST00000522987 ART3Q13508 389 aa14.52□□□□□ -0.09
MRPS28-209ENST00000522987 PTK6Q13882 451 aa14.52□□□□□ -0.09
MRPS28-209ENST00000522987 NSDHLQ15738 373 aa14.52□□□□□ -0.09
MRPS28-209ENST00000522987 HP1BP3Q5SSJ5 553 aaPredicted RBP14.52□□□□□ -0.09
MRPS28-209ENST00000522987 C3P1Q6ZMU1 363 aa14.52□□□□□ -0.09
MRPS28-209ENST00000522987 GALNTL5Q7Z4T8 443 aa14.52□□□□□ -0.09
MRPS28-209ENST00000522987 PALM2Q8IXS6 379 aa14.52□□□□□ -0.09
MRPS28-209ENST00000522987 MYO1HQ8N1T3 1032 aa14.52□□□□□ -0.09
MRPS28-209ENST00000522987 ZNF740Q8NDX6 193 aa14.52□□□□□ -0.09
MRPS28-209ENST00000522987 MDS2Q8NDY4 140 aa14.52□□□□□ -0.09
MRPS28-209ENST00000522987 MCUQ8NE86 351 aa14.52□□□□□ -0.09
MRPS28-209ENST00000522987 CALML6Q8TD86 181 aa14.52□□□□□ -0.09
MRPS28-209ENST00000522987 TM4SF19Q96DZ7 209 aa14.52□□□□□ -0.09
MRPS28-209ENST00000522987 MAGED4Q96JG8 741 aa14.52□□□□□ -0.09
MRPS28-209ENST00000522987 UTP23Q9BRU9 249 aaKnown RBP14.52□□□□□ -0.09
MRPS28-209ENST00000522987 FAM167BQ9BTA0 163 aa14.52□□□□□ -0.09
MRPS28-209ENST00000522987 SPNS1Q9H2V7 528 aa14.52□□□□□ -0.09
MRPS28-209ENST00000522987 CDCP1Q9H5V8 836 aa14.52□□□□□ -0.09
MRPS28-209ENST00000522987 KLHL42Q9P2K6 505 aa14.52□□□□□ -0.09
MRPS28-209ENST00000522987 PDZD2O15018 2839 aa14.51□□□□□ -0.09
MRPS28-209ENST00000522987 A8MUA0 341 aa14.51□□□□□ -0.09
MRPS28-209ENST00000522987 C19orf84I3L1E1 186 aa14.51□□□□□ -0.09
MRPS28-209ENST00000522987 NDUFS4O43181 175 aa14.51□□□□□ -0.09
MRPS28-209ENST00000522987 GUCA1CO95843 209 aa14.51□□□□□ -0.09
MRPS28-209ENST00000522987 ZNF888P0CJ79 500 aaPredicted RBP14.51□□□□□ -0.09
MRPS28-209ENST00000522987 COX6B1P14854 86 aa14.51□□□□□ -0.09
MRPS28-209ENST00000522987 POU3F2P20265 443 aaPredicted RBP14.51□□□□□ -0.09
MRPS28-209ENST00000522987 GABRB3P28472 473 aa14.51□□□□□ -0.09
MRPS28-209ENST00000522987 EEF1DP29692 281 aaKnown RBP14.51□□□□□ -0.09
MRPS28-209ENST00000522987 MAGEA3P43357 314 aa14.51□□□□□ -0.09
MRPS28-209ENST00000522987 RGS4P49798 205 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms