RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 STATHP02808 62 aa20.45■□□□□ 0.86
R3HCC1-208ENST00000522012 ALDOCP09972 364 aaKnown RBP20.45■□□□□ 0.86
R3HCC1-208ENST00000522012 AHRP35869 848 aa20.45■□□□□ 0.86
R3HCC1-208ENST00000522012 CFHR1Q03591 330 aa20.45■□□□□ 0.86
R3HCC1-208ENST00000522012 EMX2Q04743 252 aa20.45■□□□□ 0.86
R3HCC1-208ENST00000522012 SLC14A1Q13336 389 aa20.45■□□□□ 0.86
R3HCC1-208ENST00000522012 CLNKQ7Z7G1 428 aa20.45■□□□□ 0.86
R3HCC1-208ENST00000522012 ZFAND4Q86XD8 727 aa20.45■□□□□ 0.86
R3HCC1-208ENST00000522012 C19orf47Q8N9M1 422 aaKnown RBP20.45■□□□□ 0.86
R3HCC1-208ENST00000522012 APIPQ96GX9 242 aa20.45■□□□□ 0.86
R3HCC1-208ENST00000522012 CD180Q99467 661 aa20.45■□□□□ 0.86
R3HCC1-208ENST00000522012 AP1M2Q9Y6Q5 423 aa20.45■□□□□ 0.86
R3HCC1-208ENST00000522012 PI4KAP42356 2102 aa20.45■□□□□ 0.86
R3HCC1-208ENST00000522012 TLCD2A6NGC4 264 aa20.44■□□□□ 0.86
R3HCC1-208ENST00000522012 SAP18O00422 153 aaKnown RBP20.44■□□□□ 0.86
R3HCC1-208ENST00000522012 CASC3O15234 703 aaKnown RBP20.44■□□□□ 0.86
R3HCC1-208ENST00000522012 CLEC3AO75596 197 aa20.44■□□□□ 0.86
R3HCC1-208ENST00000522012 RPLP0P05388 317 aaKnown RBP20.44■□□□□ 0.86
R3HCC1-208ENST00000522012 PRPH2P23942 346 aa20.44■□□□□ 0.86
R3HCC1-208ENST00000522012 GSTM2P28161 218 aa20.44■□□□□ 0.86
R3HCC1-208ENST00000522012 CSF2RBP32927 897 aa20.44■□□□□ 0.86
R3HCC1-208ENST00000522012 CCL7P80098 99 aa20.44■□□□□ 0.86
R3HCC1-208ENST00000522012 C6orf89Q6UWU4 347 aa20.44■□□□□ 0.86
R3HCC1-208ENST00000522012 TRPV3Q8NET8 790 aa20.44■□□□□ 0.86
R3HCC1-208ENST00000522012 CREB3L4Q8TEY5 395 aa20.44■□□□□ 0.86
R3HCC1-208ENST00000522012 ZFYVE21Q9BQ24 234 aa20.44■□□□□ 0.86
R3HCC1-208ENST00000522012 MACROD1Q9BQ69 325 aa20.44■□□□□ 0.86
R3HCC1-208ENST00000522012 MRPL1Q9BYD6 325 aaKnown RBP20.44■□□□□ 0.86
R3HCC1-208ENST00000522012 SYNDIG1Q9H7V2 258 aa20.44■□□□□ 0.86
R3HCC1-208ENST00000522012 PARD6AQ9NPB6 346 aa20.44■□□□□ 0.86
R3HCC1-208ENST00000522012 PILRAQ9UKJ1 303 aa20.44■□□□□ 0.86
R3HCC1-208ENST00000522012 COPG1Q9Y678 874 aaKnown RBP20.44■□□□□ 0.86
R3HCC1-208ENST00000522012 NPIPB8E9PQR5 432 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 LRP3O75074 770 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 CD59P13987 128 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 DIO3P55073 304 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 RELAQ04206 551 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 MAD2L1Q13257 205 aaPredicted RBP20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 RPS6KA2Q15349 733 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 SMU1Q2TAY7 513 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 AASDHQ4L235 1098 aaPredicted RBP20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 SNAP47Q5SQN1 464 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 CACHD1Q5VU97 1274 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 IL23RQ5VWK5 629 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 WDR74Q6RFH5 385 aaPredicted RBP20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 THAP11Q96EK4 314 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 TCTN2Q96GX1 697 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 OR2A5Q96R48 311 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 F2RL3Q96RI0 385 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 NUDT22Q9BRQ3 303 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 MS4A8Q9BY19 250 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 SYNPO2LQ9H987 977 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 TMEM9Q9P0T7 183 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 FTSJ1Q9UET6 329 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 PPT2Q9UMR5 302 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 EIF3LQ9Y262 564 aaKnown RBP20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 POLR3HQ9Y535 204 aaPredicted RBP20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 IGHV5-51A0A0C4DH38 117 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 NDUFS4O43181 175 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 TBX6O95947 436 aaPredicted RBP20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 C9P02748 559 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 CKMT2P17540 419 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 STX1BP61266 288 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 ACSM2AQ08AH3 577 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 TBL3Q12788 808 aaKnown RBP20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 KIAA0040Q15053 153 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 DEPDC1Q5TB30 811 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 KHDRBS2Q5VWX1 349 aaKnown RBP20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 ACSM2BQ68CK6 577 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 ASPGQ86U10 573 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 CPSF7Q8N684 471 aaKnown RBP20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 C1orf52Q8N6N3 182 aaKnown RBP20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 CHTF18Q8WVB6 975 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 SLC13A3Q8WWT9 602 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 LRRN3Q9H3W5 708 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 ZNF385DQ9H6B1 395 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 FAM60AQ9NP50 221 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 SOHLH2Q9NX45 425 aa20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 NOP53Q9NZM5 478 aaKnown RBP20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 ATXN7L1Q9ULK2 861 aaPredicted RBP20.43■□□□□ 0.86
R3HCC1-208ENST00000522012 PROB1E7EW31 1015 aa20.42■□□□□ 0.86
R3HCC1-208ENST00000522012 SH3BP5O60239 455 aa20.42■□□□□ 0.86
R3HCC1-208ENST00000522012 IDO1P14902 403 aa20.42■□□□□ 0.86
R3HCC1-208ENST00000522012 RAP1GDS1P52306 607 aa20.42■□□□□ 0.86
R3HCC1-208ENST00000522012 NME5P56597 212 aa20.42■□□□□ 0.86
R3HCC1-208ENST00000522012 CUL3Q13618 768 aa20.42■□□□□ 0.86
R3HCC1-208ENST00000522012 SQLEQ14534 574 aa20.42■□□□□ 0.86
R3HCC1-208ENST00000522012 ZSCAN26Q16670 478 aa20.42■□□□□ 0.86
R3HCC1-208ENST00000522012 GSTA3Q16772 222 aa20.42■□□□□ 0.86
R3HCC1-208ENST00000522012 FRMPD2BQ6IN97 320 aa20.42■□□□□ 0.86
R3HCC1-208ENST00000522012 RNF44Q7L0R7 432 aa20.42■□□□□ 0.86
R3HCC1-208ENST00000522012 VN1R4Q7Z5H5 301 aa20.42■□□□□ 0.86
R3HCC1-208ENST00000522012 RERGQ96A58 199 aaPredicted RBP20.42■□□□□ 0.86
R3HCC1-208ENST00000522012 CENPKQ9BS16 269 aa20.42■□□□□ 0.86
R3HCC1-208ENST00000522012 CCDC106Q9BWC9 280 aa20.42■□□□□ 0.86
R3HCC1-208ENST00000522012 AIG1Q9NVV5 245 aa20.42■□□□□ 0.86
R3HCC1-208ENST00000522012 TMED5Q9Y3A6 229 aa20.42■□□□□ 0.86
R3HCC1-208ENST00000522012 DNAH14Q0VDD8 3507 aa20.41■□□□□ 0.86
R3HCC1-208ENST00000522012 MN1Q10571 1320 aaPredicted RBP20.41■□□□□ 0.86
R3HCC1-208ENST00000522012 LOC105369274A0A096LPK9 316 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms