RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 POPDC2Q9HBU9 364 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 MRPL47Q9HD33 250 aaKnown RBP3.15□□□□□ -1.91
VPS13B-209ENST00000521559 TRPV5Q9NQA5 729 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 GKN1Q9NS71 199 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 IRAK4Q9NWZ3 460 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.15□□□□□ -1.915e-6■□□□□ 9.6
VPS13B-209ENST00000521559 HCN3Q9P1Z3 774 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 UVRAGQ9P2Y5 699 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 CNOT8Q9UFF9 292 aaKnown RBP3.15□□□□□ -1.91
VPS13B-209ENST00000521559 SLCO3A1Q9UIG8 710 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 RASAL2Q9UJF2 1139 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 STAP1Q9ULZ2 295 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 CPQQ9Y646 472 aa3.15□□□□□ -1.91
VPS13B-209ENST00000521559 MYH11P35749 1972 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 RALGAPA2Q2PPJ7 1873 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 TRIOBPQ9H2D6 2365 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 IGHV4OR15-8A0A075B7B6 117 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 CPED1A4D0V7 1026 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 GAGE10A6NGK3 116 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 BTNL10A8MVZ5 291 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 CHADO15335 359 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 HSPA12AO43301 675 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 RGS11O94810 467 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 IPO7O95373 1038 aaKnown RBP3.14□□□□□ -1.91
VPS13B-209ENST00000521559 PRAMEF12O95522 483 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 PMS2P2O95744 297 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 PTMAP06454 111 aaKnown RBP3.14□□□□□ -1.91
VPS13B-209ENST00000521559 HMBSP08397 361 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 SLC2A3P11169 496 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 PSMC3P17980 439 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 SRD5A1P18405 259 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 CD72P21854 359 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 ANOS1P23352 680 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 SP100P23497 879 aaPredicted RBP3.14□□□□□ -1.91
VPS13B-209ENST00000521559 DGKAP23743 735 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 PSMA2P25787 234 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 POU1F1P28069 291 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 GDI1P31150 447 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 SDC4P31431 198 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 CCR1P32246 355 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 STX2P32856 288 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 RDXP35241 583 aaKnown RBP3.14□□□□□ -1.91
VPS13B-209ENST00000521559 HARS2P49590 506 aaKnown RBP3.14□□□□□ -1.91
VPS13B-209ENST00000521559 SULT1E1P49888 294 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 HADHBP55084 474 aaKnown RBP3.14□□□□□ -1.91
VPS13B-209ENST00000521559 GEMIN4P57678 1058 aaKnown RBP3.14□□□□□ -1.91
VPS13B-209ENST00000521559 RPL7AP62424 266 aaKnown RBP3.14□□□□□ -1.91
VPS13B-209ENST00000521559 PITX1P78337 314 aaPredicted RBP3.14□□□□□ -1.91
VPS13B-209ENST00000521559 CCZ1BP86790 482 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 CCZ1P86791 482 aaPredicted RBP3.14□□□□□ -1.91
VPS13B-209ENST00000521559 OGDHQ02218 1023 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 FCHO2Q0JRZ9 810 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 CCDC173Q0VFZ6 552 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 NME3Q13232 169 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 TDGQ13569 410 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 PIGHQ14442 188 aaPredicted RBP3.14□□□□□ -1.91
VPS13B-209ENST00000521559 MTF1Q14872 753 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 ZNF77Q15935 545 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 ACCSLQ4AC99 568 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 BRMS1LQ5PSV4 323 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 FAM69BQ5VUD6 431 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 FAAH2Q6GMR7 532 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 VITQ6UXI7 678 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 STRADAQ7RTN6 431 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 BNIPLQ7Z465 357 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 KIAA1328Q86T90 577 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 MFSD6LQ8IWD5 586 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 BBS7Q8IWZ6 715 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 EMC1Q8N766 993 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 ATP6V0D2Q8N8Y2 350 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 C11orf65Q8NCR3 313 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 GJC3Q8NFK1 279 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 ARRDC2Q8TBH0 407 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 MAGEC3Q8TD91 643 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 DEPDC1BQ8WUY9 529 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 SECTM1Q8WVN6 248 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 RFFLQ8WZ73 363 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 ST8SIA4Q92187 359 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 HDAC2Q92769 488 aaKnown RBP3.14□□□□□ -1.91
VPS13B-209ENST00000521559 FGF14Q92915 247 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 CD101Q93033 1021 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 WBP2Q969T9 261 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 OTUB2Q96DC9 234 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 ARHGEF26Q96DR7 871 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 PGAP3Q96FM1 320 aaPredicted RBP3.14□□□□□ -1.91
VPS13B-209ENST00000521559 CFAP57Q96MR6 1250 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 SERPINB11Q96P15 392 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 MCEEQ96PE7 176 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 DDX50Q9BQ39 737 aaKnown RBP3.14□□□□□ -1.91
VPS13B-209ENST00000521559 KXD1Q9BQD3 176 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 CNPY3Q9BT09 278 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 TRMT61BQ9BVS5 477 aaKnown RBP3.14□□□□□ -1.91
VPS13B-209ENST00000521559 NUP85Q9BW27 656 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 LINC00597Q9H2U6 94 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 EVA1AQ9H8M9 152 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 UBTD1Q9HAC8 227 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 SMYD2Q9NRG4 433 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 BEX4Q9NWD9 120 aaPredicted RBP3.14□□□□□ -1.91
VPS13B-209ENST00000521559 DDIT4Q9NX09 232 aa3.14□□□□□ -1.91
VPS13B-209ENST00000521559 DUS2Q9NX74 493 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms