RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 MYLK4Q86YV6 388 aaPredicted RBP14.64□□□□□ -0.07
LSM1-203ENST00000520755 MCATQ8IVS2 390 aaKnown RBP14.64□□□□□ -0.07
LSM1-203ENST00000520755 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.64□□□□□ -0.07
LSM1-203ENST00000520755 LAS2Q8IYD9 372 aa14.64□□□□□ -0.07
LSM1-203ENST00000520755 RNF175Q8N4F7 328 aa14.64□□□□□ -0.07
LSM1-203ENST00000520755 OR1L3Q8NH93 324 aa14.64□□□□□ -0.07
LSM1-203ENST00000520755 WDR20Q8TBZ3 569 aa14.64□□□□□ -0.07
LSM1-203ENST00000520755 ZNF501Q96CX3 271 aaPredicted RBP14.64□□□□□ -0.07
LSM1-203ENST00000520755 DDA1Q9BW61 102 aa14.64□□□□□ -0.07
LSM1-203ENST00000520755 SLC29A3Q9BZD2 475 aa14.64□□□□□ -0.07
LSM1-203ENST00000520755 ASPSCR1Q9BZE9 553 aa14.64□□□□□ -0.07
LSM1-203ENST00000520755 EML4Q9HC35 981 aaKnown RBP14.64□□□□□ -0.07
LSM1-203ENST00000520755 THSD1Q9NS62 852 aa14.64□□□□□ -0.07
LSM1-203ENST00000520755 IRAK4Q9NWZ3 460 aa14.64□□□□□ -0.07
LSM1-203ENST00000520755 FOXJ2Q9P0K8 574 aa14.64□□□□□ -0.07
LSM1-203ENST00000520755 PLCL2Q9UPR0 1127 aa14.64□□□□□ -0.07
LSM1-203ENST00000520755 SCN3AQ9NY46 2000 aa14.63□□□□□ -0.07
LSM1-203ENST00000520755 SDK2Q58EX2 2172 aa14.63□□□□□ -0.07
LSM1-203ENST00000520755 TRBC2A0A5B9 178 aa14.63□□□□□ -0.07
LSM1-203ENST00000520755 CDRT15L2A8MXV6 281 aa14.63□□□□□ -0.07
LSM1-203ENST00000520755 H0YIV9 168 aa14.63□□□□□ -0.07
LSM1-203ENST00000520755 AZIN1O14977 448 aa14.63□□□□□ -0.07
LSM1-203ENST00000520755 DXOO77932 396 aaKnown RBP14.63□□□□□ -0.07
LSM1-203ENST00000520755 TBX6O95947 436 aaPredicted RBP14.63□□□□□ -0.07
LSM1-203ENST00000520755 CTSBP07858 339 aa14.63□□□□□ -0.07
LSM1-203ENST00000520755 FGF4P08620 206 aa14.63□□□□□ -0.07
LSM1-203ENST00000520755 EZRP15311 586 aaKnown RBP14.63□□□□□ -0.07
LSM1-203ENST00000520755 HRH2P25021 359 aa14.63□□□□□ -0.07
LSM1-203ENST00000520755 SERPINB3P29508 390 aa14.63□□□□□ -0.07
LSM1-203ENST00000520755 LSP1P33241 339 aa14.63□□□□□ -0.07
LSM1-203ENST00000520755 SCTRP47872 440 aa14.63□□□□□ -0.07
LSM1-203ENST00000520755 GNGT1P63211 74 aa14.63□□□□□ -0.07
LSM1-203ENST00000520755 ZC3H12BQ5HYM0 836 aaKnown RBP14.63□□□□□ -0.07
LSM1-203ENST00000520755 FBXO42Q6P3S6 717 aa14.63□□□□□ -0.07
LSM1-203ENST00000520755 IGF2-ASQ6U949 168 aa14.63□□□□□ -0.07
LSM1-203ENST00000520755 MAVSQ7Z434 540 aa14.63□□□□□ -0.07
LSM1-203ENST00000520755 VN1R4Q7Z5H5 301 aa14.63□□□□□ -0.07
LSM1-203ENST00000520755 TEFMQ96QE5 360 aaKnown RBP14.63□□□□□ -0.07
LSM1-203ENST00000520755 ZFYVE21Q9BQ24 234 aa14.63□□□□□ -0.07
LSM1-203ENST00000520755 AIF1LQ9BQI0 150 aa14.63□□□□□ -0.07
LSM1-203ENST00000520755 TUBB1Q9H4B7 451 aa14.63□□□□□ -0.07
LSM1-203ENST00000520755 CCDC86Q9H6F5 360 aaKnown RBP14.63□□□□□ -0.07
LSM1-203ENST00000520755 FARSBQ9NSD9 589 aaKnown RBP14.63□□□□□ -0.07
LSM1-203ENST00000520755 MARCOQ9UEW3 520 aaPredicted RBP14.63□□□□□ -0.07
LSM1-203ENST00000520755 SERTAD3Q9UJW9 196 aa14.63□□□□□ -0.07
LSM1-203ENST00000520755 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.63□□□□□ -0.07
LSM1-203ENST00000520755 FIS1Q9Y3D6 152 aa14.63□□□□□ -0.07
LSM1-203ENST00000520755 PCDHGA4Q9Y5G9 962 aa14.63□□□□□ -0.07
LSM1-203ENST00000520755 PCDHGA3Q9Y5H0 932 aa14.63□□□□□ -0.07
LSM1-203ENST00000520755 PTGDR2Q9Y5Y4 395 aa14.63□□□□□ -0.07
LSM1-203ENST00000520755 NCOR2Q9Y618 2525 aa14.63□□□□□ -0.07
LSM1-203ENST00000520755 C1QTNF9BB2RNN3 333 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 MANBAO00462 879 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 NVLO15381 856 aaKnown RBP14.62□□□□□ -0.07
LSM1-203ENST00000520755 OR2B3O76000 313 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 SNUPNO95149 360 aaKnown RBP14.62□□□□□ -0.07
LSM1-203ENST00000520755 TIAF1O95411 115 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 MSL3P1P0C860 447 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 C1QTNF9P0C862 333 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 UROSP10746 265 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 GRK3P35626 688 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 ITGA1P56199 1179 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 VSX2P58304 361 aaPredicted RBP14.62□□□□□ -0.07
LSM1-203ENST00000520755 LAPTM5Q13571 262 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 COL9A2Q14055 689 aaPredicted RBP14.62□□□□□ -0.07
LSM1-203ENST00000520755 TBC1D25Q3MII6 688 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 FRMPD2BQ6IN97 320 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 PWWP2BQ6NUJ5 590 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 MED27Q6P2C8 311 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 UNQ6494/PRO21346Q6UXR6 183 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 TMIGD1Q6UXZ0 262 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 BPHLQ86WA6 291 aaPredicted RBP14.62□□□□□ -0.07
LSM1-203ENST00000520755 TMEM126BQ8IUX1 230 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 LRRC34Q8IZ02 419 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 GPR135Q8IZ08 494 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 OR7G3Q8NG95 312 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 OR8K5Q8NH50 307 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 ZNF578Q96N58 590 aaPredicted RBP14.62□□□□□ -0.07
LSM1-203ENST00000520755 OR2A5Q96R48 311 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 HBEGFQ99075 208 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 ZPBPQ9BS86 351 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 TMEM121BQ9BXQ6 578 aaPredicted RBP14.62□□□□□ -0.07
LSM1-203ENST00000520755 AICDAQ9GZX7 198 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 SPRTNQ9H040 489 aaPredicted RBP14.62□□□□□ -0.07
LSM1-203ENST00000520755 ILKAPQ9H0C8 392 aaPredicted RBP14.62□□□□□ -0.07
LSM1-203ENST00000520755 NT5DC2Q9H857 520 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 FGFR1OP2Q9NVK5 253 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 TRAF6Q9Y4K3 522 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 PCDHGA7Q9Y5G6 932 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 DNAJC15Q9Y5T4 150 aa14.62□□□□□ -0.07
LSM1-203ENST00000520755 LOC105369274A0A096LPK9 316 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 LOC102723532A0A0G2JNH3 316 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 ZNF195O14628 629 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 P2RX6O15547 441 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 OR1F1O43749 312 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 SHOX2O60902 331 aaPredicted RBP14.61□□□□□ -0.07
LSM1-203ENST00000520755 SCRG1O75711 98 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 STATHP02808 62 aa14.61□□□□□ -0.07
LSM1-203ENST00000520755 EIF2S1P05198 315 aaKnown RBP14.61□□□□□ -0.07
LSM1-203ENST00000520755 ZNF28P17035 718 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms